Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10555 cluster # 10555       Sequences # 7       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10555#0 length = 1209 sequences # 5  
consensus_10555#1 length = 789 sequences # 1  
consensus_10555#2 length = 417 sequences # 1  

consensusID : consensus_10555#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1209
fasta sequence
                              [ATCTCCTCGTCTCCTCCCGTCTCCTCGTCCTCATCCACGGCGAGTCCGCGTCATCCACACGAGCCCACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTGCTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCACCTGTCGATTGTGAACTTATGAGTTATTATCACTATTGTAAAGAATTTGGTTCATGCTTTCAATACAAATTGGAGAGAATGGTCT]

[+] EMBL AK103191             [ATCTCCTCGTCTCCTCCCGTCTCCTCGTCCTCATCCACGGCGAGTCCGCGTCATCCACACGAGCCCACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGCAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGT                                                                                                                                                                   ]
[+] EMBL AK071043             [                                                                  ACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGT                                                                                                                                                                   ]
[+] EMBL AK061080             [                                                                           CCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTGCTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCACCTGTCGATTGTGAACTTATGAGTTATTATCACTATTGTAAAGAATTTGGT                                  ]
[+] EMBL CB667357             [                                                                               AACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCCGCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCTGTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTCCTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGCCGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGGGGAGGTGGCCTCCt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB667358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATTTACGGCAACCATTTGGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTTTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACCCAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTGCTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCCCCTGTCGATTGTGAACTTATGAGTTATTATCACTATTGTAAAGAATTTGGTTCATGCTTTCAATACAAATTGGAGAGAATGGTCT]


>consensus_10555#0 ATCTCCTCGTCTCCTCCCGTCTCCTCGTCCTCATCCACGGCGAGTCCGCGTCATCCACAC GAGCCCACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCC GCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCT GTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTC CTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGC CGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGG GGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCT GGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAA CTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTC CGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGA TGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGC CAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGA TTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGG GGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATA AAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACA GAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTC TTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAA CTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTG CTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCACCTGTCGATTGTGAAC TTATGAGTTATTATCACTATTGTAAAGAATTTGGTTCATGCTTTCAATACAAATTGGAGA GAATGGTCT



consensusID : consensus_10555#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 789
fasta sequence
                              [GGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGAGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTNTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTNTGCTTCTGTTANAAAAAAAAAANNNAANAANNNNNNNNNNNNNNNAANNNNANNNNNNNANNNNNNNNNNNAAAAACCTCCGGGGGGGGCCCGGCCCAAAATTCGCCTATAGGGAGTCGTTTACGCGCCCTCATTGGCGTGTTTACCAACGTGGGATGGGGAAACCTGGGTTAC]

[+] EMBL CA758501             [GGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGAGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTNTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTNTGCTTCTGTTANAAAAAAAAAANNNAANAANNNNNNNNNNNNNNNAANNNNANNNNNNNANNNNNNNNNNNAAAAACCTCCGGGGGGGGCCCGGCCCAAAATTCGCCTATAGGGAGTCGTTTACGCGCCCTCATTGGCGTGTTTACCAACGTGGGATGGGGAAACCTGGGTTAC]


>consensus_10555#1 GGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCTGGAGAAGGAGATCGT GCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAACTCCGGCCAGTCCGT CGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTCCGGCGGTGAGTACCG CGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGATGGCTATTCCGCGGA GTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGCCAGGGCGAAGGAGAA GGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGA CACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGT GCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTNTAGC TCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGA TTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAG AAATGCTATATACTNTGCTTCTGTTANAAAAAAAAAANNNAANAANNNNNNNNNNNNNNN AANNNNANNNNNNNANNNNNNNNNNNAAAAACCTCCGGGGGGGGCCCGGCCCAAAATTCG CCTATAGGGAGTCGTTTACGCGCCCTCATTGGCGTGTTTACCAACGTGGGATGGGGAAAC CTGGGTTAC



consensusID : consensus_10555#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 417
fasta sequence
                              [AGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCATTACGTAGCGTATC]

[-] EMBL CF328261             [AGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCATTACGTAGCGTATC]


>consensus_10555#2 AGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGATTTGATCCTGGGCGACACTGGCAGCG GCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGGGGCACCCAGGGTGGTGCGCAGGAACG TCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATAAAACTCCTCTTTAGCTCTAGCGCGTG TATTGATGGAAGCGAGGCATCAATCCGAGAAACAGAAGCAAAATAATGATTTGATCTTTC CTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTCTTTTGTTCTGATCAGAAATGCTATAT ACTTTGCTTCTGTTATGATACACAGTGTACCCAACTGGGTTTTGAGATGGGAGTATTTGT TCCATATACTAAAAAAAAAAAAAAAAAAAACACTGTCATGCCATTACGTAGCGTATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10555#0      ATCTCCTCGTCTCCTCCCGTCTCCTCGTCCTCATCCACGGCGAGTCCGCGTCATCCACAC 60
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      GAGCCCACCCAAAACCCAAAACCCTACTGCGCCCATGGCTTCGCCGCCGCCGCCGCCGCC 120
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      GCAGCCACCTAGCCCCTCCGCCGCCACGGCGGGGGCGGCAGCGGCGCCGGTGGACGCGCT 180
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      GTTCCTCCAGAACCTGATGAGCCGGGTCCAGCTCCGCCCGCCCTTCCTCGACACCAACTC 240
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      CTTCCTCACCCAGGACCTCGACGAGTTCCTCCTCAACGAGTTCGCCGCGCTGTCGGCCGC 300
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      CGCGGGGGCCTCCGACGATGACGACGACGGCGAGGATGGGGAAGGGGAGGGATCCGATGG 360
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ------------------------------------------------------------
                                                                                   

consensus_10555#0      GGAGGTGGTCTCCGGGGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCT 420
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ---------------GGAGGCGAGGCGGCGGCGGACGCTGGCGAGGGAGGAGGCCAAGCT 45
                                                                                   

consensus_10555#0      GGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAA 480
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      GGAGAAGGAGATCGTGCGGCTCGTGCTCGCCGGGGAGGCGGAGGAGGCGCTCAAGCCCAA 105
                                                                                   

consensus_10555#0      CTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTC 540
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      CTCCGGCCAGTCCGTCGCCGTCGGCGACCACCACATCTGCGTCGGCTTCCACGACGATTC 165
                                                                                   

consensus_10555#0      CGGCGGTGTGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGA 600
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      CGGCGGTGAGTACCGCGTCTGGGAGTGGCACGGCCACGTCATGATCTTCGACGACGAGGA 225
                                                                                   

consensus_10555#0      TGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGC 660
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      TGGCTATTCCGCGGAGTACATCTACGGCAACCACTTCGAGCCCCTCGCCGCCGCCACCGC 285
                                                                                   

consensus_10555#0      CAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGA 720
consensus_10555#2      --------------------------AGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGA 34
consensus_10555#1      CAGGGCGAAGGAGAAGGAGAGGGAGAAGAGGGAGAAGGAGCTCAGCTCGGGCCTCCGCGA 345
                                                 **********************************

consensus_10555#0      TTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGG 780
consensus_10555#2      TTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGG 94
consensus_10555#1      TTTGATCCTGGGCGACACTGGCAGCGGCGCCAATGGCTCCAAGGAGAATGGCAAGGGTGG 405
                       ************************************************************

consensus_10555#0      GGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATA 840
consensus_10555#2      GGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATA 154
consensus_10555#1      GGCACCCAGGGTGGTGCGCAGGAACGTCGTCAATGCCCCTGCGGCGCCTGCGAGGTAATA 465
                       ************************************************************

consensus_10555#0      AAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACA 900
consensus_10555#2      AAACTCCTCTTTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACA 214
consensus_10555#1      AAACTCCTCTNTAGCTCTAGCGCGTGTATTGATGGAAGCGAGGCATCAATCCGAGAAACA 525
                       ********** *************************************************

consensus_10555#0      GAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTC 960
consensus_10555#2      GAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTC 274
consensus_10555#1      GAAGCAAAATAATGATTTGATCTTTCCTTTTCTTCTGTAGTTGCCGCTGAGGGCGGTTTC 585
                       ************************************************************

consensus_10555#0      TTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAA 1020
consensus_10555#2      TTTTGTTCTGATCAGAAATGCTATATACTTTGCTTCTGTTATGATACACAGTGTACCCAA 334
consensus_10555#1      TTTTGTTCTGATCAGAAATGCTATATACTNTGCTTCTGTTANAAAAAAAAAANNNAANAA 645
                       ***************************** ***********  * * * *        **

consensus_10555#0      CTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTACACATATGCTGTTCCATTATGTG 1080
consensus_10555#2      CTGGGTTTTGAGATGGGAGTATTTGTTCCATATACTAAAAAAAAAAAAAAAAAAAACACT 394
consensus_10555#1      NNNNNNNNNNNNNNNAANNNNANNNNNNNANNNNNNNNNNNAAAAACCTCCGGGGGGG-- 703
                                                    *            *                 

consensus_10555#0      CTTAAATTTTTGCTGCTCATGTGAAAGAACTTATGCTTGCTGCACCTGTCGATTGTGAAC 1140
consensus_10555#2      GTCATGCCATTACGTAGCGTATC------------------------------------- 417
consensus_10555#1      GCCCGGCCCAAAATTCGCCTATAGGGAGTCGTTTACGCGCCCTCATTGGCGTGTTTACCA 763
                                        * * *                                      

consensus_10555#0      TTATGAGTTATTATCACTATTGTAAAGAATTTGGTTCATGCTTTCAATACAAATTGGAGA 1200
consensus_10555#2      ------------------------------------------------------------
consensus_10555#1      ACGTGGGATGGGGAAACCTGGGTTAC---------------------------------- 789
                                                                                   

consensus_10555#0      GAATGGTCT 1209
consensus_10555#2      ---------
consensus_10555#1      ---------
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)