These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10563#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1981 fasta sequence [CTTCTCTCTCCAGCCGGAGGGTGGGGTGGAGCAGTGGCGGTGGTGGAGCGGCGGCCAGAGTTGAGTGGGGAAGGAGCGGTGGCAACCTTCAACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCATGACTTCTTGGATTTGGGCGACATCGCCGGAGATGCTGTGCATCACCTCGCCGGTGCTCACCTCCGTGTCAAAGAATCCGATCTCCTGCCTCAGCACCGCCTTCAGGTACTCACGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCTTGCACAGAGTCAGAAACTCATAATTCGATTCAAGAGATTCCCAAGAATTGAACTTTGTCATGGTTAATTCGCAAAAATGCTCATCAAGATAGGCTCCTACGACGAGACCTGCAGCAAGGAACGCCATGTACACACTAATCTGCATCAAGCAAAAAAAAACGAAAAGGAGAAGATCGGATTTGTATCAAAGCTGAGAAATCGAAGAAGGAGAAGGAGACGTGTAGCTGTTCGTGGTTGTCGCGCGAGAAGGAGACCTCGCGGGAGGCGGCGGTGGCGGCGGCCTTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTGCGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGCACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCACCCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATCTGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGGAGAGAGAGAGGGGGGAGAGAGGGAAGAGGAAGTAGAGAGAGGATAGAGAGAGGGGATAGAGAGAATGGGTAGTGAGGATGATAGGTGGTGTCCACGTGGGCCCCATCATTTATTATTATTGTGTGTGAAACTGATATTTGGGTCCTATAGATTTTATTATATTTCGGATCAAATTGCCACGTAAACGCCACGTCAGATAAAGACCGAGCCAAATTAGCCACGTATGTGCCACCTCAGCTAAAACTGGGTCAAATACAGCCATAGGAACTTATTTAAACGGTTTCAAGTTGGGGACCTATCGTACCCGGTTTTGTGATCAAGGGACGAAAATCAGACTGGGTGATAAATAGAGGGATGCAAAGTGAACTTATTCCCACAAACTCCTATGCCCGAGAAGCTAAACAATCCTGGCCCGGCCCATTACTTTTGATGGGCCAGTATTGCGGGCCCAAAAAACAGGCCTTATCGTCTCGTGGAAGCAATCCGCCAATCACGCCTTCCTTATAAACGCCCCCGCTTTGATTCCTCTCCATTTCGAAATTTCCGACCGTTGCTCCTCCCCCTTTCCTTTCCCCACCCAACGGCATCTCGTCTCCACGCGAGGGATGGCGGCGGCGGCGAGGGAGGCGGCGGAGAGCCCGAACCCTAGGTCGGCGCCGCGGCGTGCGGCGGCGGCGGCGGCCAAGGACGCCAGCAGCTTCCTCAGCCCGCGTTTCCGGTCGGCGGCCGCGCAGGCCGGGTGGGACGAGGAGTCGCTCCTCCACGCGGCGCTCGTCGTCGAGGACACCCCCGTCCGCGAGTCCCGCCGCAGGA] [+] EMBL AK072042 [CTTCTCTCTCCAGCCGGAGGGTGGGGTGGAGCAGTGGCGGTGGTGGAGCGGCGGCCAGAGTTGAGTGGGGAAGGAGCGGTGGCAACCTTCAACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCATGACTTCTTGGATTTGGGCGACATCGCCGGAGATGCTGTGCATCACCTCGCCGGTGCTCACCTCCGTGTCAAAGAATCCGATCTCCTGCCTCAGCACCGCCTTCAGGTACTCACGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCTTGCACAGAGTCAGAAACTCATAATTCGATTCAAGAGATTCCCAAGAATTGAACTTTGTCATGGTTAATTCGCAAAAATGCTCATCAAGATAGGCTCCTACGACGAGACCTGCAGCAAGGAACGCCATGTACACACTAATCTGCATCAAGCAAAAAAAAACGAAAAGGAGAAGATCGGATTTGTATCAAAGCTGAGAAATCGAAGAAGGAGAAGGAGACGTGTAGCTGTTCGTGGTTGTCGCGCGAGAAGGAGACCTCGCGGGAGGCGGCGGTGGCGGCGGCCTTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTGCGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGCACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCACCCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATCTGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGGAGAGAGAGAGGGGGGAGAGAGGGAAGAGGAAGTAGAGAGAGGATAGAGAGAGGGGATAGAGAGAATGGGTAGTGAGGATGATAGGTGGTGTCCACGTGGGCCCCATCATTTATTATTATTGTGTGTGAAACTGATATTTGGGTCCTATAGATTTTATTATATTTCGGATCAAATTGCCACGTAAACGCCACGTCAGATAAAGACCGAGCCAAATTAGCCACGTATGTGCCACCTCAGCTAAAACTGGGTCAAATACAGCCATAGGAACTTATTTAAACGGTTTCAAGTTGGGGACCTATCGTACCCGGTTTTGTGATCAAGGGACGAAAATCAGACTGGGTGATAAATAGAGGGATGCAAAGTGAACTTATTCCCACAAACTCCTATGCCCGAGAAGCTAAACAATCCTGGCCCGGCCCATTACTTTTGATGGGCCAGTATTGCGGGCCCAAAAAACAGGCCTTATCGTCTCGTGGAAGCAATCCGCCAATCACGCCTTCCTTATAAACGCCCCCGCTTTGATTCCTCTCCATTTCGAAATTTCCGACCGTTGCTCCTCCCCCTTTCCTTTCCCCACCCAACGGCATCTCGTCTCCACGCGAGGGATGGCGGCGGCGGCGAGGGAGGCGGCGGAGAGCCCGAACCCTAGGTCGGCGCCGCGGCGTGCGGCGGCGGCGGCGGCCAAGGACGCCAGCAGCTTCCTCAGCCCGCGTTTCCGGTCGGCGGCCGCGCAGGCCGGGTGGGACGAGGAGTCGCTCCTCCACGCGGCGCTCGTCGTCGAGGACACCCCCGTCCGCGAGTCCCGCCGCAGGA] [-] EMBL BF430892 [ ACACACTAATCTGCATCAAGC AAAAAAAACGAAAAGGAGAAGATCGGATTTGTATCAAAGCTGAGAAATCGAAGAAGGAGAAGGAGACGTGTAGCTGTTCGTGGTTGTCGCGCGAGAAGGAGACCTCGCGGGAGGCGGCGGTGGCGGCGGCCTTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGCGTCGGTCACCACGCTCTGCAGCTTCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTGCGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGC ] [-] EMBL CB629135 [ GGAGACGGGTCTGTGCGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGCACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTAGTCGTCGCGCTCCACCCGCCGGTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATCTGCGCCGCCCGCCACCAC GGCTAT ] consensusID : consensus_10563#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1089 fasta sequence [CTTAAAGTTTTTGACAAATTCGATCCAAAAAATAAGAAAACCTTATGAGACTCACATGTCAGTTTCACACACACTGTAACAAGAAAATGGTGGGGTCATCCTCACTACCCCTTCTCTCTATCCACTCTCTTTATCCTCTCTCTCTCCCTCTTCTCTCTCCAGCCGGAGGGTGGGGTGGAGCAATGGCGGTGGTGGAGCGGCGGCCAAAGTTGAGTGGGGAAGGAGCGGTGGCAACCTTCAACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCATGACTTCTTGGATTTGGGCGACATCGCCGGAGATGCTGTGCATCACCTCGCCGGTGCTCACCTCCGTGTCAAAGAATCCGATCTCCTGCCTCAGCACCGCCTTCAGGTACTCACGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCCCGGGAGGCGGCGGTGGCGGCGGCCTTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTGCGCCGACGAAGAGATGTCCCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGCACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCACCCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATCTGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGG] [+] EMBL CB647785 [CTTAAAGTTTTTGACAAATTCGATCCAAAAAATAAGAAAACCTTATGAGACTCACATGTCAGTTTCACACACACTGTAACAAGAAAATGGTGGGGTCATCCTCACTACCCCTTCTCTCTATCCACTCTCTTTATCCTCTCTCTCTCCCTCTTCTCTCTCCAGCCGGAGGGTGGGGTGGAGCAATGGCGGTGGTGGAGCGGCGGCCAAAGTTGAGTGGGGAAGGAGCGGTGGCAACCTTCAACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCATGACTTCTTGGATTTGGGCGACATCGCCGGAGATGCTGTGCATCACCTCGCCGGTGCTCACCTCCGTGTCAAAGAATCCGATCTCCTGCCTCAGCACCGCCTTCAGGTACTCACGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCCCGGGAGGCGGCGGTGGCGGCGGCCTTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTGCGCCGACGAAGAGATGTCCCGGTAGTGC ] [-] EMBL CB647784 [ ACCTATTGCCGATGATCCTCCAGCAGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCGCGGGAGGCGGCGGTGGCGGCGGCCCTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGACGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCTCGAGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTATGTGCGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTCCCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGACGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGATGCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGCACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCACCCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATCTGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGG] consensusID : consensus_10563#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [TTTTTTTTTTAAGAAGAAACCTATGAGACTCACATGTCAGGTCGGACACACTGTAACAAGAAAATGGTGGGGTCATCCTCATACCCCTTCTCTCTATCCACTTCTCTTAATCCTCTCTCTCTCCCTCTTTCTCTCTCCAGCCGGGAGGGGTTGGGGGGTTGGAGCCAGGTGGGNGGGTGGGTGGGAAGCCGGGGGGGGCCAAAAGTTTGGAAGTTGGGGGGAAAGTGGAGGCCGGTTGGGGAAACCCTTTCCAAAAATTAAGGTTAATTGTTNATTCCGGGGGGGGTTACAAAAAACTTTGTGGTTGGTTGGTTGGTTGGAACCCCTTTCCTTCCTCCCCAATGGACCTTTCTGTGGGGCTTTTGGGGGCGACATCGCCGGAGAATTTGCTNGTGCATCACCTCCGCCGGTGCTCACCTCCGGTGTCCAAAGGAATCCGATCTCCTGCGCTCAGACACCGGCTTCAGGTACTCAACGCCGGATCCGCAGGGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCGCGGGAGGCCGTGCCGGTGGCGGCGGCCTTAGGTGTCGCTGTACCGGGTCGGTGGCCGTGCCGCGGAGTAGACGGGGAGTCGGC] [-] EMBL BI805411 [TTTTTTTTTTAAGAAGAAACCTATGAGACTCACATGTCAGGTCGGACACACTGTAACAAGAAAATGGTGGGGTCATCCTCATACCCCTTCTCTCTATCCACTTCTCTTAATCCTCTCTCTCTCCCTCTTTCTCTCTCCAGCCGGGAGGGGTTGGGGGGTTGGAGCCAGGTGGGNGGGTGGGTGGGAAGCCGGGGGGGGCCAAAAGTTTGGAAGTTGGGGGGAAAGTGGAGGCCGGTTGGGGAAACCCTTTCCAAAAATTAAGGTTAATTGTTNATTCCGGGGGGGGTTACAAAAAACTTTGTGGTTGGTTGGTTGGTTGGAACCCCTTTCCTTCCTCCCCAATGGACCTTTCTGTGGGGCTTTTGGGGGCGACATCGCCGGAGAATTTGCTNGTGCATCACCTCCGCCGGTGCTCACCTCCGGTGTCCAAAGGAATCCGATCTCCTGCGCTCAGACACCGGCTTCAGGTACTCAACGCCGGATCCGCAGGGCCGACCTCTTGCCGATGATCCTCCAGCAGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCGCGGGAGGCCGTGCCGGTGGCGGCGGCCTTAGGTGTCGCTGTACCGGGTCGGTGGCCGTGCCGCGGAGTAGACGGGGAGTCGGC] consensusID : consensus_10563#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 550 fasta sequence [CTTTCCAAAAAATAAAAAAAACCTATGAAACTCCCATGTCAGTTTCACACACACTGTAACAAAAAAATGGGGGGGGCATCCTCACTACCCCTTCTCTCTATCCACTCTCTTTATCCTCTCTCTCCCTCTTCTCTCTCCAACCGGAAGGTGGGGGGGAACAATGGCGGGGGTGGAACGGCGGCCAAAATTGAGTGGGGAAAGAGCGGTGGCAACCTTCCACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCCTGACTTCTTGGATTTGGGCGACATCCCCCGAAATGCTGTGCATCACCTCCCCGGGGCTCACCTCCGGGTCAAAAAATCCGATCTCCTGCCTCAACACCCCCTTTAGGGACTCACGCCGCATCCCCAACGCCGAACTCTTGCCGATGATCCTCCAACAAGGGATCTCTGCTTGCACAAAATCAAAAACTCATAATTCCATTCAAGAAATTCCCAAAAATTGAACTTTGTCATGGTTAATTCCCAAAAATGCTCATCAAAATAGGCTCCTACAACAAAAACTG] [+] EMBL CB629136 [CTTTCCAAAAAATAAAAAAAACCTATGAAACTCCCATGTCAGTTTCACACACACTGTAACAAAAAAATGGGGGGGGCATCCTCACTACCCCTTCTCTCTATCCACTCTCTTTATCCTCTCTCTCCCTCTTCTCTCTCCAACCGGAAGGTGGGGGGGAACAATGGCGGGGGTGGAACGGCGGCCAAAATTGAGTGGGGAAAGAGCGGTGGCAACCTTCCACATAGTATGTATTTGGGGTAAAATTTGTGTGTGTGCTACCTTCTCTCCCCTGACTTCTTGGATTTGGGCGACATCCCCCGAAATGCTGTGCATCACCTCCCCGGGGCTCACCTCCGGGTCAAAAAATCCGATCTCCTGCCTCAACACCCCCTTTAGGGACTCACGCCGCATCCCCAACGCCGAACTCTTGCCGATGATCCTCCAACAAGGGATCTCTGCTTGCACAAAATCAAAAACTCATAATTCCATTCAAGAAATTCCCAAAAATTGAACTTTGTCATGGTTAATTCCCAAAAATGCTCATCAAAATAGGCTCCTACAACAAAAACTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10563#2 ------------------TTTTTTTTTTAA--GAAGAAACCTATGAGACTCACATGTCAG 40 consensus_10563#3 ------------------CTTTCCAAAAAATAAAAAAAACCTATGAAACTCCCATGTCAG 42 consensus_10563#0 ------------------------------------------------------------ consensus_10563#1 CTTAAAGTTTTTGACAAATTCGATCCAAAAAATAAGAAAACCTTATGAGACTCACATGTC 60 consensus_10563#2 GT-CGGACACACTGTAACAAGAAAATGGTGGGGTCATCCTCA-TACCCCTTCTCTCTATC 98 consensus_10563#3 TTTCACACACACTGTAACAAAAAAATGGGGGGGGCATCCTCACTACCCCTTCTCTCTATC 102 consensus_10563#0 ------------------------------------------------------------ consensus_10563#1 AGTTTCACACACACTGTAACAAGAAAATGGTGGGGTCATCCTCACTACCCCTTCTCTCTA 120 consensus_10563#2 CACTTCTCTTAATCCTCTCTCTCTCCCTCTTTCTCTCTCCAGCCGGGAGGGGTTGGGGGG 158 consensus_10563#3 CACT-CTCTTTATCCTCTCTCTCCCTCT---TCTCTCTCCAACCGGAAGG---TGGGGGG 155 consensus_10563#0 -----------------------------CTTCTCTCTCCAGCCGGAGGG---TGGGGTG 28 consensus_10563#1 TCCACTCTCTTTATCCTCTCTCTCTCCCTCTTCTCTCTCCAGCCGGAGGG---TGGGGTG 177 ********** **** ** ***** * consensus_10563#2 TTGGAGCCAGGTGGGNGGGTGGGTGGGAAGCCGGGGGGGGCCAAAAGTTTGGAAGTTGGG 218 consensus_10563#3 ---GAACAATG-GCGGGGGTGGA----------ACGGCGGCCAAAA--TTGAG---TGGG 196 consensus_10563#0 ---GAGCAGTG-GCGGTGGTGGA----------GCGGCGGCCAGAG--TTGAG---TGGG 69 consensus_10563#1 ---GAGCAATG-GCGGTGGTGGA----------GCGGCGGCCAAAG--TTGAG---TGGG 218 ** * * * * ***** ** ***** * *** **** consensus_10563#2 GGGAAAGTGGAGGCCGGTTGGGGAAACCCTTTCCAAAAATTAAGGTTAATTGTTNATTCC 278 consensus_10563#3 GAAAGAGCGGTGGC----------AACCTTCCACATAG------------TATGTATTT- 233 consensus_10563#0 GAAGGAGCGGTGGC----------AACCTTCAACATAG------------TATGTATTT- 106 consensus_10563#1 GAAGGAGCGGTGGC----------AACCTTCAACATAG------------TATGTATTT- 255 * ** ** *** **** * ** * * * *** consensus_10563#2 GGGGGGGGTTACAAAAAACTTTGTGGTTGGTTGGTTGGTTGGAACCCCTTTCCTTCCTCC 338 consensus_10563#3 ----GGGGT----AAAATTTGTGTGTGTG---------------CTACCTTCTCTCCCCT 270 consensus_10563#0 ----GGGGT----AAAATTTGTGTGTGTG---------------CTACCTTCTCTCCCAT 143 consensus_10563#1 ----GGGGT----AAAATTTGTGTGTGTG---------------CTACCTTCTCTCCCAT 292 ***** **** * **** ** * * *** *** consensus_10563#2 CCAATGGACCTTTCTGTGGGGCTTTTGGGGGCGACATCGCCGGAGAATTTGCTNGTGCAT 398 consensus_10563#3 ------GACTTCTT----GGATTT----GGGCGACATCCCCCGAAA---TGCTG-TGCAT 312 consensus_10563#0 ------GACTTCTT----GGATTT----GGGCGACATCGCCGGAGA---TGCTG-TGCAT 185 consensus_10563#1 ------GACTTCTT----GGATTT----GGGCGACATCGCCGGAGA---TGCTG-TGCAT 334 *** * * ** ** ********** ** ** * **** ***** consensus_10563#2 CACCTCCGCCGGTGCTCACCTCCGGTGTCCAAAGGAATCCGATCTCCTGCGCTCAGACAC 458 consensus_10563#3 CACCTCC-CCGGGGCTCACCTCCGG-GTCAAAA--AATCCGATCTCCTGC-CTCA-ACAC 366 consensus_10563#0 CACCTCG-CCGGTGCTCACCTCCGT-GTCAAAG--AATCCGATCTCCTGC-CTCA-GCAC 239 consensus_10563#1 CACCTCG-CCGGTGCTCACCTCCGT-GTCAAAG--AATCCGATCTCCTGC-CTCA-GCAC 388 ****** **** *********** *** ** *************** **** *** consensus_10563#2 CGGCTTCAGGTACTCAACGCCGGATCCGCAGGGCCGACCTCTTGCCGATGATCCTCCAGC 518 consensus_10563#3 CCCCTTTAGGGACTCA-CGCCGCATCCCCAACGCCGAACTCTTGCCGATGATCCTCCAAC 425 consensus_10563#0 CGCCTTCAGGTACTCA-CGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGC 298 consensus_10563#1 CGCCTTCAGGTACTCA-CGCCGCATCCGCAGCGCCGACCTCTTGCCGATGATCCTCCAGC 447 * *** *** ***** ***** **** ** ***** ******************** * consensus_10563#2 AGGTGATCTCTGCAGCAAGGAACGCCATGTACACACTAATCTCGCGGGAGGCCGTGCCGG 578 consensus_10563#3 AAGGGATCTCTGCTTGCACAAA-ATCAAAAACTCA-TAATTCCATTCAAGAAATTCCCAA 483 consensus_10563#0 AGGTGATCTCTGCTTGCACAGA-GTCAGAAACTCA-TAATTCGATTCAAGAGATTCCCAA 356 consensus_10563#1 AGGTGATCTCTGC----------------------------------------------- 460 * * ********* consensus_10563#2 TGGCGGCGGCCTTAGGTGTCGCTGTACCGGGTCGGTGGCCGTGCCGCGGAG----TAGAC 634 consensus_10563#3 AAAT--TGAACTTTGTCATGGTTAATTCCCAAAAATGCTCATCAAAATAGGCTCCTACAA 541 consensus_10563#0 GAAT--TGAACTTTGTCATGGTTAATTCGCAAAAATGCTCATCAAGATAGGCTCCTACGA 414 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 GGGGAGTCG--GC----------------------------------------------- 645 consensus_10563#3 CAAAAACTG--------------------------------------------------- 550 consensus_10563#0 CGAGACCTGCAGCAAGGAACGCCATGTACACACTAATCTGCATCAAGCAAAAAAAAACGA 474 consensus_10563#1 ----------AGCAAGGAACGCCATGTACACACTAATCTCC------------------- 491 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AAAGGAGAAGATCGGATTTGTATCAAAGCTGAGAAATCGAAGAAGGAGAAGGAGACGTGT 534 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AGCTGTTCGTGGTTGTCGCGCGAGAAGGAGACCTCGCGGGAGGCGGCGGTGGCGGCGGCC 594 consensus_10563#1 ------------------------------------CGGGAGGCGGCGGTGGCGGCGGCC 515 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 TTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGA 654 consensus_10563#1 TTAGTGTCGCTGTACCGGCGTCGTGGCCGTGCGCGGAGTAGACGGCGGAGTCGGCAACGA 575 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCT 714 consensus_10563#1 CGCTGTCGTCGTTGCTGGCGAAGGAGGTGTTGTGTTAGGCACCACGACGATGGCGCGGCT 635 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTG 774 consensus_10563#1 CGCGTCGGTCACCACGCTCTGCAGCTCCAGCCGCCTGCCGCCACCGGCGACGGGTCTGTG 695 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CGCCGACGAGGAGATGTCGCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTC 834 consensus_10563#1 CGCCGACGAAGAGATGTCCCGGTAGTGCGGGCGGGTGGACCGCCTCGACATGTAGTAGTC 755 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGA 894 consensus_10563#1 CCTCGCCGTCCGCCGAAACAGCGCGGGGCGGGGAGGAGTGGGCCAGGCACCTGATGGCGA 815 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGAT 954 consensus_10563#1 CGACGGCGGAGGGCGGCGGGGTGGAGGAGTCGGAGTGAGGAGGAGCCGGAAGGAGGCGAT 875 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGC 1014 consensus_10563#1 GCGGGCCGGCGGTTGGCGTCCGAGGGAAGGAGGCAGCCACACGGCGGCGCCAGACCTGGC 935 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 ACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCAC 1074 consensus_10563#1 ACGACGATGGGCCGGGCCGAGGCAAGGGCGGTGGCCGCAGTGGTCGTCGTCGCGCTCCAC 995 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATC 1134 consensus_10563#1 CCGCCGCTCGTCGCCGCTCCACCCGCCGCCTGCCACCTCTCAGCTCCGTCGCCACCCATC 1055 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 TGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGGAGAGAGAGAGGGGGGAGAGAGGGAAG 1194 consensus_10563#1 TGCGCCGCCCGCCGCCGCTCGCTATTCTCAGGGG-------------------------- 1089 consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AGGAAGTAGAGAGAGGATAGAGAGAGGGGATAGAGAGAATGGGTAGTGAGGATGATAGGT 1254 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GGTGTCCACGTGGGCCCCATCATTTATTATTATTGTGTGTGAAACTGATATTTGGGTCCT 1314 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 ATAGATTTTATTATATTTCGGATCAAATTGCCACGTAAACGCCACGTCAGATAAAGACCG 1374 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AGCCAAATTAGCCACGTATGTGCCACCTCAGCTAAAACTGGGTCAAATACAGCCATAGGA 1434 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 ACTTATTTAAACGGTTTCAAGTTGGGGACCTATCGTACCCGGTTTTGTGATCAAGGGACG 1494 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AAAATCAGACTGGGTGATAAATAGAGGGATGCAAAGTGAACTTATTCCCACAAACTCCTA 1554 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 TGCCCGAGAAGCTAAACAATCCTGGCCCGGCCCATTACTTTTGATGGGCCAGTATTGCGG 1614 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GCCCAAAAAACAGGCCTTATCGTCTCGTGGAAGCAATCCGCCAATCACGCCTTCCTTATA 1674 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 AACGCCCCCGCTTTGATTCCTCTCCATTTCGAAATTTCCGACCGTTGCTCCTCCCCCTTT 1734 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 CCTTTCCCCACCCAACGGCATCTCGTCTCCACGCGAGGGATGGCGGCGGCGGCGAGGGAG 1794 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GCGGCGGAGAGCCCGAACCCTAGGTCGGCGCCGCGGCGTGCGGCGGCGGCGGCGGCCAAG 1854 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GACGCCAGCAGCTTCCTCAGCCCGCGTTTCCGGTCGGCGGCCGCGCAGGCCGGGTGGGAC 1914 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------------------------------------------------------------ consensus_10563#3 ------------------------------------------------------------ consensus_10563#0 GAGGAGTCGCTCCTCCACGCGGCGCTCGTCGTCGAGGACACCCCCGTCCGCGAGTCCCGC 1974 consensus_10563#1 ------------------------------------------------------------ consensus_10563#2 ------- consensus_10563#3 ------- consensus_10563#0 CGCAGGA 1981 consensus_10563#1 ------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||