These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10564#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2077 fasta sequence [CTCATAGTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC-AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCTTATGCCTGCGAGTTCTTGGGTGCAGGAGGAGTTGTTAGTTGTTACCTTTGTCTCCTTCGTTGATCCATTGAAAGAGGCAGTGGCTGTTTGCTCTTTGATCTGCATGTCCTTTGGCCTTCACCGACGACGAGATGGGCTCTGCTCCGTTCGGTGACGCCGTCGCCGGCGGTGGGCTCTATGAGTACCAGGGGTATCACGGTGGCTTCGCCGGCGGCCATGGTCTCGGCCAACCGGCCGGCCGAGCGCCCGCGTTGGACGACGGTGAAACTGAGGGGATGGACGCATCCGCCGCCGCCGCAGTCGCCGCCATGGAGATGGCAAAGAGGAATTGTGGAGGCGGCCGGGAGGAGAAGGCGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGCTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACATTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATTACCTTGCATTTGACATATATATATTTGACATTTTCACATTTCACTGCAACTTCAGTTTAACTAGTAACTAGGAGCTTTGCTCCTTCATGC] [+] EMBL CB646427 [CTCATAGTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCT ] [+] EMBL AK068593 [ GTCCTCTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAAATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGGCTCCCCTTCTGGTCGTGCCCGCCGAATCGGCCGCCGGGCACCTGACCTGACCTGACCTCTCTTCCTCTTCCTCTGCATCTTCCACTTCCTCTTCCTCTTTTCTCGGTGTCTGAATCTCTCCTGAGTTGTTGAACAGCCTGAGGAAGACACGGGCTACGATCCTTGTGCCATCCTGATTTGTCCCTCCCTGTCGCCTCACTGTTTCACGCGTCCTGGAAGCAAGCAGGCAAACGACATGGCGGCTCTGCTTTTCTTGTGATCTGGGTTGGAAGCTTCTGCTCCTTCGATCTTCGCCATTTCTGAGGCGTTCTTGGGAGCAGGGCCCTTGGTCTTGCTGCTGTCTGCCACCACTCTGCCCTGCTTGCCCCTGTGTGTTCTTCTTGCTGGCTTTCTCGTCCTTGTCTGAATCTTGCAGGTTCTTGTCTGTGACATCCTGGAGACGCGTTTCAGGTGTTCTTGATCTTGGAGCTTATGCCTGCGAGTTCTTGGGTGCAGGAGGAGTTGTTAGTTGTTACCTTTGTCTCCTTCGTTGATCCATTGAAAGAGGCAGTGGCTGTTTGCTCTTTGATCTGCATGTCCTTTGGCCTTCACCGACGACGAGATGGGCTCTGCTCCGTTCGGTGACGCCGTCGCCGGCGGTGGGCTCTATGAGTACCAGGGGTATCACGGTGGCTTCGCCGGCGGCCATGGTCTCGGCCAACCGGCCGGCCGAGCGCCCGCGTTGGACGACGGTGAAACTGAGGGGATGGACGCATCCGCCGCCGCCGCAGTCGCCGCCATGGAGATGGCAAAGAGGAATTGTGGAGGCGGCCGGGAGGAGAAGGCGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGCTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAGGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACATTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATTACCTTGCATTTGACATATATATATTTGACATTTTCACATTTCACTGCAACTTCAGTTTAACTAGTAACTAGGAGCTTTGCTCCTTCATGC] [+] EMBL AU063360 [ ttTTCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGNCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGNACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTCAAGGC ] [+] EMBL AU063369 [ tntnCCTCCTCAGTTCATCCTTGCCTGTTGCCTACTCCCTCCTCAATCCTGCAGAAGTTTCTGAAGAGATCAATTACCAAGAAACTGAGAGGAAACACACAGATTATCTGCACACAGATCATCACCATACTTGCATCTGTCGTTGAGAGAAGATGATCCCGTTCACAAAGCAGAGAAGCACCAAGATGAAACGTGCCCTGCACTAAGCTATGCTGTTCGGCAGGAGCTCGGTGAGGCCAGTGATGGAAGCACGCCGCCGCACGCCAAGATTCTGCAAGGCGGACTCGGAGTCGGAGCAGAGGAAGCTACGGCGTGTC AGG TCCCCTTCTGGTCGTG CCGCCGAATCGGCCGNCGGGCAACTGACCTGACCTGACCTCTCTTCCTC ] [-] EMBL CB645941 [ CGGCGATGGCGCTCAAGAGCCACAGCGAGGCGGAGCGGCGGCGGCGGGAGAGGATCAACGCCCACCTCGCCACGNTCCGCACCATGGTGCCCTGCACCGACAAGATGGACAAGGCCGCGCTGCTGGCTGAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAG ] [-] EMBL CB619442 [ GAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCCTCCTCAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCCGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTCACCACGCTGGGCGGCCGCGTCCGCCTCGCCTTCCTGGTCTCGTGCGGGTCTCGCGGCGGCGCCGCCGCCGCCGCCATGGCCTCGGTGCGCCACGCGCTCCAGTCCGTGCTCGACAAGGCCAGCTCCGGCTTCGACTTCGCGCCCAGGGCGGCGTCGCTGCTGGGCAGCAAACGCCGGAAGGTCTCCACGTTCGAGTCATCGAGCTCCTCGTCTTGACAAGTTTCAGAGAAAATTACGCCAAAGTCAAAAAGATCTGATCGGTTGCAGTGATTTTTGCTTCTGATAAATTAATCGATCATGGTTGTAAAAGAAAGATACAAAGCTGAAGTGAGTTTCTTCTTTAATTTCTTTCTTTCTTTCTTTTTGGCAAGATTAATTACTGAAGTGGCTTCTCAACAGTGGTTAGCACTTAGCATTTTGCTGCTGCTTATCTTTTCGAAGAGCGTTGTGCTCCATGCATGATTAATAACCTTGCATTTGACATATATATAT ] [+] EMBL AU093310 [ GAGGTGGTGGGCCACGTCAAGAAGCTGAAGAGCGCCGCGGCGCGCGTCGGCCGGCGCGCCACCGTCCCGTCCGGCGCCGACGAGGTCGCCGTCGACGAAGCGTCCGCCACCGGAGGCGGAGGAGAAGGCCCCCTCNTCNTNAGGGCGACGCTGAGCTGCGACGACCGCGCCGACCTCTTCGTGGACGTCAAGCGCGCGCTGCAGCNGCTCGGGCTGGAGGTGGTCGGCTCCGAGGTC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||