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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10568#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 3639 fasta sequence
[GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATTTNTCGGCAAAANACGCAG-CCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCG-CCCCGCNGCCTCCNTCGTCCGCCGATAGGC-ANCCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGTCTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTTCTCGA-AATAGAATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAGTTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTGGGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATGCATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGTGGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTCAGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGGCCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTCTGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAAGAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGGATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTGTAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCTCAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGAATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCACTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAATTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTGTGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACTGTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTACGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGGTGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGAGGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTATGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTATCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGGACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATTCAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCAGAAGACCCATAGTTCAATTAGTAAAGAGTTGACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTTTAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATATTAATTCTCTGCGTTGCCCTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACCGTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAATTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGTAAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTGTACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCTCATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTCAGGCGAGTTATGCTAGTCATGTTTGTTCATATCCAATTATTGATGATCAGCATTCTGTAAGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGATTTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCAAAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGATCATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACAATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCATCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTGATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGAGCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATCCTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGTTAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAGTAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG]
[+] EMBL AU068800 [GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATTTNTCGGCAAAANACGCAG CCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCG CCCCGCNGCCTCCNTCGTCCGCCGATAGGC ANCCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGTCTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTTCTCGA AATAGA ]
[+] EMBL AK069352 [ TTTCTCGGCAAAAGACGCAGTCCATGGCCAACGCCCACGCGAGCACCAGGGCTCCCGCGCCGCCGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCGCCCCCGCCGCCTCCCTCGTCCGCCGATAGGCGCACCCCGCAGCCCGGAGACGGAGGCCGCACCGACGGATCGAGCTCCGCCGCTGCGGCGGCCGATCGGAAGGGAAAGAAGCCGATGTCGGCGTCTGATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGAAGTTGCTCGAGAGTAGCATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAGTTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTGGGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATGCATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGTGGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTCAGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGGCCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTCTGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAAGAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGGATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTGTAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCTCAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGAATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCACTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAATTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTGTGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACTGTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTACGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGGTGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGAGGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTATGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTATCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGGACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATTCAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCAGAAGACCCATAGTTCAATTAGTAAAGAGTTGACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTTTAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATATTAATTCTCTGCGTTGCCCTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGAACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACAAGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTCGGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGCCGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAGTTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGGATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACCGTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAATTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGTAAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTGTACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCTCATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTCAGGCGAGTTATGCTAGTCATGTTTGTTCATATCCAATTATTGATGATCAGCATTCTGTAAGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGATTTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGGAAGCGCATGCGGGATTACCCACCGTCAAGAGTCAGCTACAGCAGCGTGGAATTTCTCCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCAAAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGATCATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACAATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCATCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTGATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGAGCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATCCTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGTTAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAGTAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG]
consensusID : consensus_10568#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1290 fasta sequence
[GCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACAC-AAAGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGGGGGAAGATTCTTGAGTTCTTCAGCAGTTATGATACAACGGATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTTGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCATCTGGACCGCTCCAATC]
[+] EMBL AK120082 [GCGGGCGACGCGAGTCCCACTCCCAGGAGTCCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGCCGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGAAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACAC AAAGCATTTGAGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAATCAGGGGGAAGATTCTTGAGTTCTTCAGCAGTTATGATACAACGGATGACATTTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGAATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGTAATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTGTGCAGAAGCTCTCAGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATTGTCCGCGGCGCTCCTTGCGTGACCTTGCTGCGCATAGAGTCTCACTATGACATCATCTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCCAATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCATCTGGACCGCTCCAATC]
[+] EMBL AU070532 [ CTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGCCAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAGTTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGGCTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAAGCATTTGAGAa ]
[+] EMBL AU097065 [ CTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGCCCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCAAAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCACGAAGGAAGGAGGAGAGGACATCTGATTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCATTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGAACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACAAGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCCAGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTT ]
consensusID : consensus_10568#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 199 fasta sequence
[CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTC-GATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF327395 [CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTC GATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAATCCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]
[+] EMBL CF327489 [CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCTCATCGATCTTTGACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAAATAAATGTGATCAGATGAATCCAAGGTATTG ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10568#0 GCCATTTAGCGGAATGGCGTTGTGGCGAACCCACTCTCGGCAGTAGCAGAATTTCCAATT 60
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TNTCGGCAAAANACGCAGCCATGGCCAACGCCCACGCNAGCACCAGGGCTCCCGCGCCGC 120
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CGCCTCATCCACCGATGCTTCTTCGGCCGCCGCCGCAGCCCAGGGCGGCGCCGTTGCGCC 180
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CCGCNGCCTCCNTCGTCCGCCGATAGGCANCCCCGCAGCCCGGAGACGGAGGCCGCACCG 240
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 ACGGNTCGAGCTCCGNCGCTGCGGCGCCTGATCGGANGGGAAAGAAGCCGATGTCGGCGT 300
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CTNATGATCGGAAACAGGCGCGAAGGAAGGAGAAGAGGAAATCTGGTTACCCGAAAGAGA 360
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 AGTTTCTCGAAATAGAATGCGTTCGTATCAAGGCCCCGCCAAGGAGGAGGTAAGGAGAAG 420
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TTTTACTTTTCATTCTTGACTGGCCTGGGGCTGAGCGTTCTTGTGCCATCTTCCGTGTTG 480
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GGATCTTTGGACTTGGATCCTGTAGTTCGTGTGAAATCTTGGGATTATCTTGCATCGATG 540
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CATAGGCGCAATCTTGTTGCTTAGGCACGGTTCTTGTGTCAGTTTGTATGTTGGAATGGT 600
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GGAGCTAGGAGCTTGGCATTCTTGATTTCTATTTAACCATGGTTGATTTTACTGTGCTTC 660
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 AGCGAAGAAATCTTGGATGGAATTTTATGGTATCCTAGAACAGAGTTGAAATCAACTAGG 720
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CCTTATGACAGATAAAAAAAAAAAAAACCAGGCACATGTTAGGGTGCCAATTCAGCTTTC 780
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TGTATGTATAGCGAGTAAACTGGTTCTTTCTTGATATCTTCTTATGGCACTTGGATAAAA 840
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GAACGGCCTCCTTTCCTGTCGAAATTGTTGAGACTTAGTTGCTCCTGCTTGCGTTAATGG 900
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 ATTTGCTTTTTAATGCGATGCATTTTTATCGCACTGTAACAATGGGTGTGTGTGTGTGTG 960
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TAACAATGTGGTGTTAGTAGGTGATGTCATGCCTGCCGTGATATTTTGGTAAGAAATCCT 1020
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CAAGCCAAATTTATGAGCTTTCATTGTCATTGAATGGTTCATCCATATGTGCATTTGGGA 1080
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 ATTGGGATTGCATCACTAGGATCGTTTTTCTAAATTATTGACCCCTTACTTGGAAAATCA 1140
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CTTGGCACACTCTACTGTTCGGTCTAAAATATTCAACATTTGGTTGGTTACTAGCCAAAA 1200
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TTGGCTTGATAGCTCGACGCATAATTGGCAAGAGTAGACAAACTGCAGACACCAGTTTTG 1260
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TGATTTTGCTAATCAGTTCTTAAAAATCTTCATTCATCCCCTATTTCTTTGTTTCCTACT 1320
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GTGAAATGTTTGATATTGATATTACTTCCCTGTAATTGGGTTTAAGTCTGGTAATATGTA 1380
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CGGATTGTAACTTGTATTGTTGTGGAATAGCCTTTGGATAAAAAAGGAAGGTGGACGTGG 1440
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TGACACGCTATCCAATTGAAATTCCACAAAAAGAATATACTCACAATTGTCACTTCACGA 1500
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GGATCACCAGATTTGACTCCTTTTAACCTTTGATAATGTTGAAAATGGGCATATAAATTA 1560
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TGACTAATGTGATATCATAGTAAGAAATCCTAAAGCCAGACGTATGAGATTTCTGTGTTA 1620
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------GCGGGCGACGCGAGTCCCACTCCCAGGAGT 30
consensus_10568#0 TCAGACAGTGTTATAAGGAAAATTTTGTCGGTATGTGTATTTGGGATTTTGCATCACTGG 1680
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CCAGCTCCCGCGCCACCGCAGCCCAGGGCGGCGCCGTTGTCTCTGGGCCGGCGCGGCCGC 90
consensus_10568#0 -ACATGATTTCTCTAAATCATAGGCTTCCAAACTCACCCTAGTGTTCGGTCTAAAATATT 1739
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CGCGCTCGCCTCCTCGCTCGCCCACCGAGCGCTTCACCCAGGGGCGGGCCCGTGAGCAGC 150
consensus_10568#0 CAGGCTTCTGCTGGGTTGCTGCCTAGAATTGTATCA--GAAGACCCATAGTTCAATTAGT 1797
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CCGGAGGCGGAGGCCGCGGCATCGACGGTTTGAGCGCCGCCGCTGCATTGGTGGACCGCA 210
consensus_10568#0 AAAGAGTT-GACAAATTGTCAAAGCACCAGTTCTGCTAGCCTGTTATTTAACCTTGTTTT 1856
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AAGGAAAGAGAAAGATCGGAGAAGGATCTTTTACAGTCTCTGATGATCGGGAACAGGCAC 270
consensus_10568#0 TAGAATACCATGTATCCCTATTCAACCTTGTTTCCTCGTCTGAAATTTTTAGCCCTTATA 1916
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 GAAGGAAGGAGGAGAGGACATCTGA---TTCCCCCAAAGTGAAGCTTCTCAGGAGTAGCA 327
consensus_10568#0 TTAATTCTCTGCGTTGCC-CTCTTGTAAATAGCATTCAGACAGAGAAGGAGAACAACCGA 1975
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 TTCGTGCGTATCATGGCGACGCCGAGGAGAAGCTTTCAGATAGAAAAGGAGAACCAGTGA 387
consensus_10568#0 ACTCTCCCAGTCAAAATTCCAGATCTAGCATGTCAAAATCTTTTCCTCAGGTGTTTCACA 2035
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ACTACCCGTTTCATAATTGCGGGGCAAGCACATCAAAACTGCCTGCTCATGTGTATCACA 447
consensus_10568#0 AGAAACTTCCTATGGGAGACGCCGTGTATTATTATTTCAAGGACATCTATGATGCTCTTC 2095
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AGAAAATTCCCATGGGAGAAGCTGCAAATCATTATTTCAGGAACATTGATAATTCTTTCC 507
consensus_10568#0 GGATAGCACAAGTTGGTGTACGTTTGATATTTCTTGATCATGATTATTCAGAATTTAGGC 2155
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AGCAACCGGAAGTTGGTTTGCGTTTAAAGTATCTCAGCCATCACTATTCAGAATTTAGGC 567
consensus_10568#0 CGGTTGTTCCAGATGAGGAGTGCTTCTATAGGAGTTTCATATTTTCCTATCTGGAGCAAG 2215
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CAGTACATAGAGATGAGGAATGTTTCTATAGGAGTTTCATATTTTCCTACCTGGAGCAAG 627
consensus_10568#0 TTGTTGATAGGATAGACACACTTTGGGAAGACCGCCTTCTTGCTGCTCTTAGAGAATTGG 2275
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 TTGTTGATAGTATAGGCACACGTGAGGAAGACCGCCTTCTTGCTGCTGTTAGAGCATTGG 687
consensus_10568#0 ATAGACGAGCTGAACGTTTTCAGCGGGCCTCTGAATTTTCCCGGAGACGAGATGCACACC 2335
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CTACCAAAGCTGAAAATCTTCAATGGGCCTCTGAATTTTCCCAGAAACACAAAGCATTTG 747
consensus_10568#0 GTTGTTACACAATAGTGGCATGACATCGCAGTGTTAATTCTAACAAATTTGTGTAGTTAA 2395
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AGAGGCTGATAGAGAAAATAAAGGGATGGAAGCGCATGCAGGAGCACCCAATATCAATAA 807
consensus_10568#0 TTACCTGATTGAACAAATATTCAACCTTGCAAAAAAATTTTGCAGTTGCACAGTACTAGT 2455
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 TCA----GGGGGAAGATTCTTGAGTTCTTCAGCAG----TTATGATACAACGGATGACAT 859
consensus_10568#0 AAAGAATACAATGGAGACAAACAAAGTTATATGTGTCTTACGTTGATGACTGAAATGCTG 2515
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 TTTTGCTTTCCTCAGATTAGTAGCAGCTACCTGGATGTGCACGCGCATATGGAATTATGA 919
consensus_10568#0 TACACATGCTCCTTCATGGTGTGGCCATCTGATCCTAAGTCTTCCTTCTTACTACTATCT 2575
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ATGGTGTGCAACTAATTGTGGAGAAAATCAGAATCTGGAAGATTGGTGCTCGAAGCACGT 979
consensus_10568#0 CATCAAATATTATTTCGAATGATTATCTTCATACTTGTACTTTAACTATGGAAGCTTCTC 2635
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AATTGCTCCTCGTGTGTACGCAACCTCTGCTGCAGTAAAAGCTTG-TGCAGAAGCT-CTC 1037
consensus_10568#0 AGGCGAGTTATGCTAGTCATGTTTGTTCAT-ATCCAATTATTGATGATCAGCATTCTGTA 2694
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AGGGTGACCGTCCAAGTGGAGAACGTTCATGATGGAACTTGCGAAAGTACGCACTACATT 1097
consensus_10568#0 AGCGCCATTGTAAGATGCTGGTAACTCTTTGGTTGATAGATGCCAGCTGTATGCAATGAT 2754
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 GTCCGCGGCGCTCCTTGC--GTGACCTTGCTGCGCATAGAGTCTCAC--TATGACATCAT 1153
consensus_10568#0 TTATTGTATCATTGATTCTTGCAGGTATTTGTGAAGCTGATTGCGAAAATAAAGGGATGG 2814
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 CTACCCACTCCCTCCTAGTTCTATTAATAGTTCAAATCCACATGAGGAGAAGTTACTCCC 1213
consensus_10568#0 AAGCGCATGCGGGATTACCCACCGTCA----AGAGTCAGCTACAGCAGCGTGGAATTTCT 2870
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 AATCCCAAGTAGCATTCTTGCGTATGACAGGAGAAAGATTTTCGATAGAAAACAAAAGCA 1273
consensus_10568#0 CCTCGAGTTCTTCAGCAGTTATGATTCAACGAATGACATTTTTGCTTTCCTCAGATTAGT 2930
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 TCTGGACCGCTCCAATC------------------------------------------- 1290
consensus_10568#0 AGCAGCTACCTGGATTTGCACGCACAAAGGGAGATATGGACAGCATGTAAGAGAAGGTCA 2990
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 AAGTCCGGAAGATTGGTGCTCGATGCTGGTTATTCCTCCCCATGCGCCGGAAGACCGGAT 3050
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CATACCAATAGCCTTAGCGGAAGCACTACAATGATGGAACTAGTCTAGATACGCACTACA 3110
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 ATGTTGCCCGTGGCACACCCCGAGTGAGCTTGCTGCTCATAGAGTCTAGATATGGCATCA 3170
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TCTACGCACTCCCTCCTAGTGCTGCTACTCCTACTAGCCGTCCAAATCAGCCAAGGCCTG 3230
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 ATCCTGTGGCGAGACCGGGATTCTGGTGGTTCGATTGCTGCATTGTTGTTCCCAAGGAGA 3290
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GCCTCTTGCAAGGCAGCACGGCCTAGCCGGTCACCAGCTACAGAGCAGGCCAAGCAAATC 3350
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CTGCACTGACTCTTCGAGAGTTCAAGGCAAGGGGCAGTCTTCAACTGATGAAGCTCTAGT 3410
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TAGCACCTGGGTTGATGATGAATGTATACAGGCCATCATAATCTGTTGTCCTGTGAGGAG 3470
consensus_10568#2 ------------------------------------------------------------
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 TAGGAACGTAAACATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTT 3530
consensus_10568#2 ------------CATTGATCATTCCTGAATTTGTGCTCTTAAGTAACTCGATCGATCTTT 48
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 GACATGGCTTTGTTGCCCCCCACAGGATTTTGATGTGTAGATAAATGTGATCAGATGAAT 3590
consensus_10568#2 GACATGGCTTTGTTGCCCCCCACAGGATTTTGATATGTAGATAAATGTGATCAGATGAAT 108
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 CCAAGGTATTGCGGTTTTCGTTTCTGGTCGATTTCCATGTGTGGAGTTG----------- 3639
consensus_10568#2 CCAAGGTATTGCGGTTTTCGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 168
consensus_10568#1 ------------------------------------------------------------
consensus_10568#0 -------------------------------
consensus_10568#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 199
consensus_10568#1 -------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||