cluster # 10576

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Oryza sativa
cluster # 10576 cluster # 10576 Sequences # 7 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10576#0 length = 2875 sequences # 6

consensus_10576#1 length = 244 sequences # 1

consensusID : consensus_10576#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2875
fasta sequence

                              [TCCGCCACCCCGCGCGGCGGCGAGATCGAGGCGCCGCCGCCGCCGTATGGCCTCGGCTGATCCCTTCCTAGCCGCATCGTCCCCGGCGCACCTCCTCCCCCGAACCCTCGGCCCCGCCGCGCCGCCCGGGACCGCCGCGTCCCCCTCCGCGGCCCGCGGGGCGCTGCTCGACGGCATCTCCCGACCACTGAAAGGGTCCAAGGAGCTAGTTGAGCAGGCTAGAATGGCGATGAAGGCTGTCGGGGACATAGGGAAGCTCTATGGCGGCGATGGAGCGGGGGTGGCTGCCGCCGCTGCGGATGGCAAGAACAACCAGCTGGGGAGAAGGCCTGCGCCGGACCGCAAGCGATTTCGGCTCAAGACCAAGCCCCCCGCGAACAAACCGGTGCAAAATGTGGACTACACAGAGTTACTGAACATTGAAGATCCTGATGAATACTTTTTGACCCTGGAAAAGCTCGAAAGAGCTGATAAGGAGATTAAAAGGTTAAGGGGTGAGGTTCCAACTGAAGGAACATATAATAACCGAGGCATTGAACCACCTAAGCTACGACCTGGGCTGTTGAGGAGAAAATCAGTCCATTCTTACAAGTTTAGCGCCAGCTCTGATGCCCCAGATGCCATTGAAGCACCTGCTTCCCAAACAGAAACTGTGACAGAATCACAGACTACCCAAGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGTTTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGTTTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGAAGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAAAGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCAGAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCGAATTTCACAATTGGAGAAACGCATTTTTGTTGGAGATGCCCTGGAAGATAAACATGCAGATCTTTCAAAAGATGATGAATCTGATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACCTGTGCGACGTTCATCTGATGCAGTGGGTTTGATGATCAATGAGGGCTCTACTGCAATGGAGACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTGCTTGAATCTGAATCGAACCCTCCAGATGGTGTAACAACAGATGAACAGCCAACAGAAAATTCACCAATTGGTGTGGACAGAGATAGTGAACTTGTCAAAGAGAAGGGCACATCTTCCAGGCATAGTGTTTCGTTAGAGGAAGATGTTATGCCAATAGATTGCACGGTTTCTCCTCCCGATCATTTGGAAGGTGGCTCGACTGAAGTGTTGACGAACATTACAAGTAGAAATGTATCTCCA-TTGCATCATGGAGA-TGGCAATTCTGAA-CATCAGGAAATA-GTTGGAGGTGATGTGGCCCAAGATAATCCGATCCATACACTGGAAACACCCCCAGAAGATACTCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAAACTGGCAGTTGATAAAAGCAACGCACTCTCCCCAAGTCAAGGGAAGCAACATAGAGGCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAGAGACAGATAATCCGATCCATACATCAGAAACACCCCCAATGGATACTAATCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAAACTGGCAGTTGATAAAAGCAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAG--GCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAAAGACAGACAACCTGATCCATACACCGGAAATACCCCCAGAAGATACAGACAACACAGTACATACACCGGAAATTCCTCCAGAAGATACTTATCCACAGAATCAATCTGAAATACATCGTGGAAACACTGAGAAACTGGCAGTTGATATAAACAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAGGAAACAATAAGAAGCAGCCATCAAAGCGACAAAAAAGAGCAGCAGGTGAGGCAGGTGATTTGGAAACACACGCACCAAACTTTGAACCAGAGATTCAACCTCATGTGCAGGACACAGATGTTGAGCAACAGCCAGCTTGTACAAGCCAGTCACCATCACCGAGTAATGGTACGAGTAAAAATGAAGTTCGAAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGC-GGGTCTTACTTGGCAAGCGGGTGTTAGACGAAGCACACGAATACGGTCAAAACCTTTGCAGCATT-GGCTTGGTGAAAGATTTATATAT-GGGCGTATACATGGAACAATGGCCACAGTCATCGGTGTTAAATCATTCTCTCCTAGTCAGGAAGGCAAAGGCCCATTGAGGGTGAAATCCTTTGTTCCTGAACAGTTCTCAGATTTGTTAGCCGAATCTGCCAAGTACTGAGGTCCTGGCCCGGGAAAGTCCCTATCTTCCTTTCTTTGGACAAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGTGATCTGTTCCGTATCTATGTGTTACTTTTGCTGTTAATTTTTCGTCATTTGAGGTGCTTCCTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTAATGCATACATGCTATGAACTTGCATACATGATTTATTTTTTTTAAAAGGAAGCTGCTCGGAGTCGGGGCCCGGGACTGCCCATTTTCATTTGTAGCTGTTGTGTGTTTTCAAAAG]

[+] EMBL AK073890             [TCCGCCACCCCGCGCGGCGGCGAGATCGAGGCGCCGCCGCCGCCGTATGGCCTCGGCTGATCCCTTCCTAGCCGCATCGTCCCCGGCGCACCTCCTCCCCCGAACCCTCGGCCCCGCCGCGCCGCCCGGGACCGCCGCGTCCCCCTCCGCGGCCCGCGGGGCGCTGCTCGACGGCATCTCCCGACCACTGAAAGGGTCCAAGGAGCTAGTTGAGCAGGCTAGAATGGCGATGAAGGCTGTCGGGGACATAGGGAAGCTCTATGGCGGCGATGGAGCGGGGGTGGCTGCCGCCGCTGCGGATGGCAAGAACAACCAGCTGGGGAGAAGGCCTGCGCCGGACCGCAAGCGATTTCGGCTCAAGACCAAGCCCCCCGCGAACAAACCGGTGCAAAATGTGGACTACACAGAGTTACTGAACATTGAAGATCCTGATGAATACTTTTTGACCCTGGAAAAGCTCGAAAGAGCTGATAAGGAGATTAAAAGGTTAAGGGGTGAGGTTCCAACTGAAGGAACATATAATAACCGAGGCATTGAACCACCTAAGCTACGACCTGGGCTGTTGAGGAGAAAATCAGTCCATTCTTACAAGTTTAGCGCCAGCTCTGATGCCCCAGATGCCATTGAAGCACCTGCTTCCCAAACAGAAACTGTGACAGAATCACAGACTACCC AGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGTTTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGTTTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGAAGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAAAGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCAGAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCGAATTTCACAATTGGAGAAACGCATTTTTGTTGGAGATGCCCTGGAAGATAAACATGCAGATCTTTCAAAAGATGATGAATCTGATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACCTGTGCGACGTTCATCTGATGCAGTGGGTTTGATGATCAATGAGGGCTCTACTGCAATGGAGACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTGCTTGAATCTGAATCGAACCCTCCAGATGGTGTAACAACAGATGAACAGCCAACAGAAAATTCACCAATTGGTGTGGACAGAGATAGTGAACTTGTCAAAGAGAAGGGCACATCTTCCAGGCATAGTGTTTCGTTAGAGGAAGATGTTATGCCAATAGATTGCACGGTTTCTCCTCCCGATCATTTGGAAGGTGGCTCGACTGAAGTGTTGACGAACATTACAAGTAGAAATGTATCTCCA TTGCATCATGGAGA TGGCAATTCTGAA CATCAGGAAATA GTTGGAGGTGATGTGGCCCAAGATAATCCGATCCATACACTGGAAACACCCCCAGAAGATACTCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAAACTGGCAGTTGATAAAAGCAACGCACTCTCCCCAAGTCAAGGGAAGCAACATAGAGGCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAGAGACAGATAATCCGATCCATACATCAGAAACACCCCCAATGGATACTAATCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAAACTGGCAGTTGATAAAAGCAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAG  GCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAAAGACAGACAACCTGATCCATACACCGGAAATACCCCCAGAAGATACAGACAACACAGTACATACACCGGAAATTCCTCCAGAAGATACTTATCCACAGAATCAATCTGAAATACATCGTGGAAACACTGAGAAACTGGCAGTTGATATAAACAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAGGAAACAATAAGAAGCAGCCATCAAAGCGACAAAAAAGAGCAGCAGGTGAGGCAGGTGATTTGGAAACACACGCACCAAACTTTGAACCAGAGATTCAACCTCATGTGCAGGACACAGATGTTGAGCAACAGCCAGCTTGTACAAGCCAGTCACCATCACCGAGTAATGGTACGAGTAAAAATGAAGTTCGAAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGC GGGTCTTACTTGGCAAGCGGGTGTTAGACGAAGCACACGAATACGGTCAAAACCTTTGCAGCATT GGCTTGGTGAAAGATTTATATAT GGGCGTATACATGGAACAATGGCCACAGTCATCGGTGTTAAATCATTCTCTCCTAGTCAGGAAGGCAAAGGCCCATTGAGGGTGAAATCCTTTGTTCCTGAACAGTTCTCAGATTTGTTAGCCGAATCTGCCAAGTACTGAGGTCCTGGCCCGGGAAAGTCCCTATCTTCCTTTCTTTGGACAAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGTGATCTGTTCCGTATCTATGTGTTACTTTTGCTGTTAATTTTTCGTCATTTGAGGTGCTTCCTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTAATGCATACATGCTATGAACTTGCATACATGATTTATTTTTTTTAAAAGGAAGCTGCTCGGAGTCGGGGCCCGGGACTGCCCATTTTCATTTGTAGCTGTTGTGTGTTTTCAAAAG]
[+] EMBL CF306608             [                                                                                                                                                                                                                                                                                                                                                           GATTTCGGCTCAAGACCAAGCCCCCCGCGAACAAACCGGTGCAAAATGTGGACTACACAGAGTTACTGAACATTGAAGATCCTGATGAATACTTTTTGACCCTGGAAAAGCTCGAAAGAGCTGATAAGGAGATTAAAAGGTTAAGGGGTGAGGTTCCAACTGAAGGAACATATAATAACCGAGGCATTGAACCACCTAAGCTACGACCTGGGCTGTTGAGGAGAAAATCAGTCCATTCTTACAAGTTTAGCGCCAGCTCTGATGCCCCAGATGCCATTGAAGCACCTGCTTCCCAAACAGAAACTGTGACAGAATCACAGACTACCCAAGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGTTTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGTTTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGAAGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAAAGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCAGAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCGAATTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CF306657             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACAGACTACCCAAGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGTTTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGTTTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGAAGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAAAGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCAGAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCGAATTTCACAATTGGAGAAACGCATTTTTGTTGGAGATGCCCTGGAAGATAAACATGCAGATCTTTCAAAAGATGATGAATCTGATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACCTGTGCGACGTTCATCTGATGCAGTGGGTTTGATGATCAATGAGGGCTCTACTGCAATGGAGACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTGCTTGAATCTGAATCGAACCCTCCAGATGGTGTAACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL C27347               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGAATCTAATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACCTGTNCGACGTTCATCTNATGCAGTGGGTTTAATGATCAATGAGGGCTCTACTGCAATGGAGACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTNCTTGANTCTNANTCGAACCCTCCAGATGGTGTAACAACAGATGAACAGCCAACAGAAAATTCACCAATTGGTGTGGACAGAGATAGTGAACTTNTCAAAGAGAAGGGCACATCTTCCAGGCATAGTGTTTCGTTAGAGGAAGATGTTATGCCAATAGATTGCACGGTTTCTCCTCCCGATCATTTGGAAGGTGGCTCGACTGANGTTTTGACGNACATTACAAGTAGAAATGTATCTCCATTTGCATCATGGAGATTGGCAATTTTGAACCATCAGGAAATAGGTTGGAGGTGATGTGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF314794             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           actggactgAAGGAGTAGAAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAAAGACAGACAACCTGATCCATACACCGGAAATACCCCCAGAAGATACAGACAACACAGTACATACACCGGAAATTCCTCCAGAAGATACTTATCCACAGAATCAATCTGAAATACATCGTGGAAACACTGAGAAACTGGCAGTTGATATAAACAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAGGAAACAATAAGAAGCAGCCATCAAAGCGACAAAAAAGAGCAGCAGGTGAGGCAGGTGATTTGGAAACACACGCACCAAACTTTGAACCAGAGATTCAACCTCATGTGCAGGACACAGATGTTGAGCAACAGCCAGCTTGTACAAGCCAGTCACCATCACCGAGTAATGGTACGAGTAAAAATGAAGTTCGAAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGCNGGGTCTTACTTGGCAAGCGGGTGTTAGACGAAGCACACGAATACGGTCAAAACCTTTGCAGCATTGGGCTTGGTGAAATATTTATATATGGGGCGTATACA                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB000111             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                AAAAATGAAGTTCGAAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGC GGGTCTTACTTGGCAAGCGGGTGTTAGGCGAAGCACACGAATACGGTCAAAACCTTTGCAGCATT GGCTTGGTGAAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]




>consensus_10576#0
TCCGCCACCCCGCGCGGCGGCGAGATCGAGGCGCCGCCGCCGCCGTATGGCCTCGGCTGA
TCCCTTCCTAGCCGCATCGTCCCCGGCGCACCTCCTCCCCCGAACCCTCGGCCCCGCCGC
GCCGCCCGGGACCGCCGCGTCCCCCTCCGCGGCCCGCGGGGCGCTGCTCGACGGCATCTC
CCGACCACTGAAAGGGTCCAAGGAGCTAGTTGAGCAGGCTAGAATGGCGATGAAGGCTGT
CGGGGACATAGGGAAGCTCTATGGCGGCGATGGAGCGGGGGTGGCTGCCGCCGCTGCGGA
TGGCAAGAACAACCAGCTGGGGAGAAGGCCTGCGCCGGACCGCAAGCGATTTCGGCTCAA
GACCAAGCCCCCCGCGAACAAACCGGTGCAAAATGTGGACTACACAGAGTTACTGAACAT
TGAAGATCCTGATGAATACTTTTTGACCCTGGAAAAGCTCGAAAGAGCTGATAAGGAGAT
TAAAAGGTTAAGGGGTGAGGTTCCAACTGAAGGAACATATAATAACCGAGGCATTGAACC
ACCTAAGCTACGACCTGGGCTGTTGAGGAGAAAATCAGTCCATTCTTACAAGTTTAGCGC
CAGCTCTGATGCCCCAGATGCCATTGAAGCACCTGCTTCCCAAACAGAAACTGTGACAGA
ATCACAGACTACCCAAGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGT
TTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGT
TTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGA
AGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAA
AGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCA
GAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCG
AATTTCACAATTGGAGAAACGCATTTTTGTTGGAGATGCCCTGGAAGATAAACATGCAGA
TCTTTCAAAAGATGATGAATCTGATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACC
TGTGCGACGTTCATCTGATGCAGTGGGTTTGATGATCAATGAGGGCTCTACTGCAATGGA
GACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTGCTTGAATCTGAATCGAACCCTCC
AGATGGTGTAACAACAGATGAACAGCCAACAGAAAATTCACCAATTGGTGTGGACAGAGA
TAGTGAACTTGTCAAAGAGAAGGGCACATCTTCCAGGCATAGTGTTTCGTTAGAGGAAGA
TGTTATGCCAATAGATTGCACGGTTTCTCCTCCCGATCATTTGGAAGGTGGCTCGACTGA
AGTGTTGACGAACATTACAAGTAGAAATGTATCTCCATTGCATCATGGAGATGGCAATTC
TGAACATCAGGAAATAGTTGGAGGTGATGTGGCCCAAGATAATCCGATCCATACACTGGA
AACACCCCCAGAAGATACTCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAA
ACTGGCAGTTGATAAAAGCAACGCACTCTCCCCAAGTCAAGGGAAGCAACATAGAGGCAA
AAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAGAGACAGATAATCCGATCCATACATC
AGAAACACCCCCAATGGATACTAATCCACAGAATCAATCTGAAATACATCGTGGAAGCAT
TGAGAAACTGGCAGTTGATAAAAGCAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAG
AGGCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAAAGACAGACAACCTGATCCA
TACACCGGAAATACCCCCAGAAGATACAGACAACACAGTACATACACCGGAAATTCCTCC
AGAAGATACTTATCCACAGAATCAATCTGAAATACATCGTGGAAACACTGAGAAACTGGC
AGTTGATATAAACAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAGGAAACAATAA
GAAGCAGCCATCAAAGCGACAAAAAAGAGCAGCAGGTGAGGCAGGTGATTTGGAAACACA
CGCACCAAACTTTGAACCAGAGATTCAACCTCATGTGCAGGACACAGATGTTGAGCAACA
GCCAGCTTGTACAAGCCAGTCACCATCACCGAGTAATGGTACGAGTAAAAATGAAGTTCG
AAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGCGGGTCTTAC
TTGGCAAGCGGGTGTTAGACGAAGCACACGAATACGGTCAAAACCTTTGCAGCATTGGCT
TGGTGAAAGATTTATATATGGGCGTATACATGGAACAATGGCCACAGTCATCGGTGTTAA
ATCATTCTCTCCTAGTCAGGAAGGCAAAGGCCCATTGAGGGTGAAATCCTTTGTTCCTGA
ACAGTTCTCAGATTTGTTAGCCGAATCTGCCAAGTACTGAGGTCCTGGCCCGGGAAAGTC
CCTATCTTCCTTTCTTTGGACAAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGT
GATCTGTTCCGTATCTATGTGTTACTTTTGCTGTTAATTTTTCGTCATTTGAGGTGCTTC
CTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTA
ATGCATACATGCTATGAACTTGCATACATGATTTATTTTTTTTAAAAGGAAGCTGCTCGG
AGTCGGGGCCCGGGACTGCCCATTTTCATTTGTAGCTGTTGTGTGTTTTCAAAAG

consensusID : consensus_10576#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 244
fasta sequence

                              [CGGGAAAGTCCCTATCTTCCTTTCTTTGGACGAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGTGATTTGTTCCGTATGTATGTGTTACTTTTGATGATAAATTTTCGTCCTTTGAGGTGCTTCCTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTAATGCATACATGCTATGAACTTGCAGTCATGGAAAAAAAAAAGAAAAAAACTACT]

[-] EMBL CF307070             [CGGGAAAGTCCCTATCTTCCTTTCTTTGGACGAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGTGATTTGTTCCGTATGTATGTGTTACTTTTGATGATAAATTTTCGTCCTTTGAGGTGCTTCCTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTAATGCATACATGCTATGAACTTGCAGTCATGGAAAAAAAAAAGAAAAAAACTACT]




>consensus_10576#1
CGGGAAAGTCCCTATCTTCCTTTCTTTGGACGAGTTGCATTCTTCGACATGCATGGCTCG
CGCAACCTGTGATTTGTTCCGTATGTATGTGTTACTTTTGATGATAAATTTTCGTCCTTT
GAGGTGCTTCCTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAG
TTGCAGTGTAATGCATACATGCTATGAACTTGCAGTCATGGAAAAAAAAAAGAAAAAAAC
TACT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10576#0      TCCGCCACCCCGCGCGGCGGCGAGATCGAGGCGCCGCCGCCGCCGTATGGCCTCGGCTGA 60
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TCCCTTCCTAGCCGCATCGTCCCCGGCGCACCTCCTCCCCCGAACCCTCGGCCCCGCCGC 120
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GCCGCCCGGGACCGCCGCGTCCCCCTCCGCGGCCCGCGGGGCGCTGCTCGACGGCATCTC 180
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      CCGACCACTGAAAGGGTCCAAGGAGCTAGTTGAGCAGGCTAGAATGGCGATGAAGGCTGT 240
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      CGGGGACATAGGGAAGCTCTATGGCGGCGATGGAGCGGGGGTGGCTGCCGCCGCTGCGGA 300
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGGCAAGAACAACCAGCTGGGGAGAAGGCCTGCGCCGGACCGCAAGCGATTTCGGCTCAA 360
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GACCAAGCCCCCCGCGAACAAACCGGTGCAAAATGTGGACTACACAGAGTTACTGAACAT 420
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGAAGATCCTGATGAATACTTTTTGACCCTGGAAAAGCTCGAAAGAGCTGATAAGGAGAT 480
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TAAAAGGTTAAGGGGTGAGGTTCCAACTGAAGGAACATATAATAACCGAGGCATTGAACC 540
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      ACCTAAGCTACGACCTGGGCTGTTGAGGAGAAAATCAGTCCATTCTTACAAGTTTAGCGC 600
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      CAGCTCTGATGCCCCAGATGCCATTGAAGCACCTGCTTCCCAAACAGAAACTGTGACAGA 660
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      ATCACAGACTACCCAAGATGATGTGCATGGCTCAGCTCATGAAATGACAACAGAGCCTGT 720
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TTCTTCAAGATCTAGCCAAGATGCTATACCAGATATCTCAGCGAGAGAAGATTCATTTGT 780
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TTGGAAGGATAACAGTTTCACCTTGAATTACTTACTCTCCGCATTCAAAGATCTGGATGA 840
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGACGAAGAAGAAAATTTACTCCGAAAGACTTTACAGATTAAAGAAATAAGCATAGGAAA 900
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGTTTGTCTCCCTGACTTCAATGTTCCAGGTGACACGCCTGCAAGCAACACTACTGAGCA 960
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GAAAAATCCCATGAGTGATCATGCATTAGAAAGAACTGCACCTGGAAGCAACCTTGCTCG 1020
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AATTTCACAATTGGAGAAACGCATTTTTGTTGGAGATGCCCTGGAAGATAAACATGCAGA 1080
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TCTTTCAAAAGATGATGAATCTGATGGGTCTCCGGAAAGTCTGCTGTGTAAACAATCACC 1140
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGTGCGACGTTCATCTGATGCAGTGGGTTTGATGATCAATGAGGGCTCTACTGCAATGGA 1200
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GACCCCAAGTCCTAGCATCAAATCTCCAGAGCATGTGCTTGAATCTGAATCGAACCCTCC 1260
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGATGGTGTAACAACAGATGAACAGCCAACAGAAAATTCACCAATTGGTGTGGACAGAGA 1320
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TAGTGAACTTGTCAAAGAGAAGGGCACATCTTCCAGGCATAGTGTTTCGTTAGAGGAAGA 1380
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGTTATGCCAATAGATTGCACGGTTTCTCCTCCCGATCATTTGGAAGGTGGCTCGACTGA 1440
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGTGTTGACGAACATTACAAGTAGAAATGTATCTCCATTGCATCATGGAGATGGCAATTC 1500
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGAACATCAGGAAATAGTTGGAGGTGATGTGGCCCAAGATAATCCGATCCATACACTGGA 1560
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AACACCCCCAGAAGATACTCCACAGAATCAATCTGAAATACATCGTGGAAGCATTGAGAA 1620
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      ACTGGCAGTTGATAAAAGCAACGCACTCTCCCCAAGTCAAGGGAAGCAACATAGAGGCAA 1680
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAGAGACAGATAATCCGATCCATACATC 1740
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGAAACACCCCCAATGGATACTAATCCACAGAATCAATCTGAAATACATCGTGGAAGCAT 1800
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGAGAAACTGGCAGTTGATAAAAGCAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAG 1860
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGGCAAAAATAAGAAGCAGCCATCGAAGAGAGGAAAAAGAAAGACAGACAACCTGATCCA 1920
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TACACCGGAAATACCCCCAGAAGATACAGACAACACAGTACATACACCGGAAATTCCTCC 1980
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGAAGATACTTATCCACAGAATCAATCTGAAATACATCGTGGAAACACTGAGAAACTGGC 2040
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AGTTGATATAAACAATGCACTCTCCCCAAGTAAAGGCAAGGAACAAAGAGGAAACAATAA 2100
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GAAGCAGCCATCAAAGCGACAAAAAAGAGCAGCAGGTGAGGCAGGTGATTTGGAAACACA 2160
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      CGCACCAAACTTTGAACCAGAGATTCAACCTCATGTGCAGGACACAGATGTTGAGCAACA 2220
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      GCCAGCTTGTACAAGCCAGTCACCATCACCGAGTAATGGTACGAGTAAAAATGAAGTTCG 2280
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      AAAGAGAAATAAGAAGCAAGATTTGAACAGAAGAAAAAGCTTGGCAGATGCGGGTCTTAC 2340
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TTGGCAAGCGGGTGTTAGACGAAGCACACGAATACGGTCAAAACCTTTGCAGCATTGGCT 2400
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      TGGTGAAAGATTTATATATGGGCGTATACATGGAACAATGGCCACAGTCATCGGTGTTAA 2460
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      ATCATTCTCTCCTAGTCAGGAAGGCAAAGGCCCATTGAGGGTGAAATCCTTTGTTCCTGA 2520
consensus_10576#1      ------------------------------------------------------------
                                                                                   

consensus_10576#0      ACAGTTCTCAGATTTGTTAGCCGAATCTGCCAAGTACTGAGGTCCTGGCCCGGGAAAGTC 2580
consensus_10576#1      --------------------------------------------------CGGGAAAGTC 10
                                                                         **********

consensus_10576#0      CCTATCTTCCTTTCTTTGGACAAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGT 2640
consensus_10576#1      CCTATCTTCCTTTCTTTGGACGAGTTGCATTCTTCGACATGCATGGCTCGCGCAACCTGT 70
                       ********************* **************************************

consensus_10576#0      GATCTGTTCCGTATCTATGTGTTACTTTTGCTGTTAATTTTTCGTCATTTGAGGTGCTTC 2700
consensus_10576#1      GATTTGTTCCGTATGTATGTGTTACTTTTGATGATAAATTTTCGTCCTTTGAGGTGCTTC 130
                       *** ********** *************** ** *** ******** *************

consensus_10576#0      CTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTA 2760
consensus_10576#1      CTCCTATATTGTAGAGCTAACTCTGTGTAGAAGTGTTTGTATCTGTGGAGTTGCAGTGTA 190
                       ************************************************************

consensus_10576#0      ATGCATACATGCTATGAACTTGCATACATGATTTATTTTTTTTAAAAGGAAGCTGCTCGG 2820
consensus_10576#1      ATGCATACATGCTATGAACTTGCAGTCATGGAAAAAAA---AAAGAAAAAAACTACT--- 244
                       ************************  ****    *        * **  ** ** **   

consensus_10576#0      AGTCGGGGCCCGGGACTGCCCATTTTCATTTGTAGCTGTTGTGTGTTTTCAAAAG 2875
consensus_10576#1      -------------------------------------------------------