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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10593#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 2595 fasta sequence
[CATTCTCTCTCTAGGGTTGCGGCCGCACCAAACCCCCACCCCCCCCCCAACTCCGGCGACCGGCGGCCGGCGGCGCACGCCCATAACCCTCCCATGCCGCCTCACCGGTGACCACCTACCCGCCCTTCCCAAGATCCCCCTTCGATTCATCTGATTAGCGCGAGCAGCGAGGTTCGGCGCGGCGGGATGGGGACGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCCGTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCGAGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTCATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGCAAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATGTACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGGAAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACCTGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCATGAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCCATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAAC-AAGAAAGGGA-GGAAAGTAGCTGCAAAGCGCA-CCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAAC---TAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAGGCAGCATAAGAAATACATCGAATCAGTCTCTCTGGT]
[+] EMBL AK102522 [CATTCTCTCTCTAGGGTTGCGGCCGCACCAAACCCCCACCCCCCCCCCAACTCCGGCGACCGGCGGCCGGCGGCGCACGCCCATAACCCTCCCATGCCGCCTCACCGGTGACCACCTACCCGCCCTTCCCAAGATCCCCCTTCGATTCATCTGATTAGCGCGAGCAGCGAGGTTCGGCGCGGCGGGATGGGGACGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCCGTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCGAGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTCATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGCAAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATGTACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGGAAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACCTGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCATGAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCCATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAAC AAGAAAGGGA GGAAAGTAGCTGCAAAGCGCA CCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAAC TAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAG ]
[+] EMBL AK066095 [ TATGTGGGGAGCGAGATCCAGCAGCAGACCATGTCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATACATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAGCTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATCAGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACAGATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGTCATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTGCACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAAC AAGAAAGGGA GGAAAGTAGCTGCAAAGCGCA CCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAAC TAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAGGCAGCATAAGAAATACATCGAATCAGT ]
[+] EMBL AK062033 [ GCTCTACCTGTTGCGTGGATTATAACCCGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATATTCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTGGATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGTTCGTGGTCAATGCAGGGCAACCTATGTAAGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAAC AAGAAAGGGA GGAAAGTAGCTGCAAAGCGCA CCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAAC TAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAGGCAGCATAAGAAATACATCGAATCAGT ]
[-] EMBL BE530913 [ AGCACATCATAAAGGTTAACATGATGTGTGGACCACGCAAGGATTTCCAGCCCTCGCTCTCATTTCAATCGTTTCAGCGTGTCCTACTTGATCTGTGGCAAAAACCCATGGATGATTCATTCTCACTCGATCTGTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTGGCTACCGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAAC AAGAAAGGGA GGAAAGTAGCTGCAAAGCGCA CCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAACTAGTAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATC ]
[-] EMBL AU062874 [ aaAGNTTGCCGATTCAATGGACAAACAAAGCAANGGANGAAAAGTAGCTGCAAAGCGCACCCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTATTGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTCGGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAGATGGCTAACCGTCTTTTGTTTGTTNTCTGTCTCAAC TAGTTACTTTTGGTATAGGCATTGGTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATATAATTATTCAGGCAGCATAAGAAATACATCGAATCAGTCTCTCTGGT]
consensusID : consensus_10593#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 766 fasta sequence
[AATCAGGGGTGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGAGTAAGAATTTCGGGTAGCTGCTTCAGTTTATGCATCGCATTGTAGATTATTATGCAATGCTAATGATATTCCTAATATGCTTTTTAGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGGCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGGCAGAAGGATACTAGTCAAATGTGGACTGTTATGGATCCTGGGCTGAAGTTTCTCTTTGTGATTGGTCGTGGTCATGCAGGGAACCTATGTAAGACATCATTA]
[+] EMBL BE040345 [AATCAGGGGTGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGAACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTTTGGGTTCCCAAATTGAGTAAGAATTTCGGGTAGCTGCTTCAGTTTATGCATCGCATTGTAGATTATTATGCAATGCTAATGATATTCCTAATATGCTTTTTAGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGGCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGGCAGAAGGATACTAGTCAAATGTGGACTGTTATGGATCCTGGGCTGAAGTTTCTCTTTGTGATTGGTCGTGGTCATGCAGGGAACCTATGTAAGACATCATTA]
consensusID : consensus_10593#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 757 fasta sequence
[ACATTAGGAGAACCNGGNTTAAAANTATAATCNAGAAATGCAACAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACNGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGATTTCGTTGACCAAACCACCTTCATACAATATTNCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGGTCGNGGGCAATGCAGGGGCAACCTATGTAAGCNCTCATAAAGGGTAACATGATGTGTGGACCACCGCAAGGATTTCCAGCCCTCGCTCTCATTTTCNATCGGTTCAGCGGGTCCTACTTGATCNGGGGGCAAAAACCCCTGGGTGATTNCNTTTCCCA]
[+] EMBL CA765494 [ACATTAGGAGAACCNGGNTTAAAANTATAATCNAGAAATGCAACAACAGTGAGGTACAGCGGGAAATGTTTATGCAACTAGGAAAAGTTATGTACNGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTTGAGCAATTATTTCAAGATTTCGTTGACCAAACCACCTTCATACAATATTNCAAGTCCTTTTGGGTTCCCAAATTGGAGATGTGGATTGACACCATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTAAAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGGTTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGATGAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGAGCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAGGTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTTTCTCTTTGTGATTGGTCGNGGGCAATGCAGGGGCAACCTATGTAAGCNCTCATAAAGGGTAACATGATGTGTGGACCACCGCAAGGATTTCCAGCCCTCGCTCTCATTTTCNATCGGTTCAGCGGGTCCTACTTGATCNGGGGGCAAAAACCCCTGGGTGATTNCNTTTCCCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10593#0 CATTCTCTCTCTAGGGTTGCGGCCGCACCAAACCCCCACCCCCCCCCCAACTCCGGCGAC 60
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CGGCGGCCGGCGGCGCACGCCCATAACCCTCCCATGCCGCCTCACCGGTGACCACCTACC 120
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CGCCCTTCCCAAGATCCCCCTTCGATTCATCTGATTAGCGCGAGCAGCGAGGTTCGGCGC 180
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GGCGGGATGGGGACGGAGGCGGAGGCGGCGGAGGTGGTGGAGTCGGTGAGCGACCTCGCC 240
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GTGCAGGACCCTCCCGGGGAGGAGTTCTCCGCGGCGGACCTCCGGTGGGTCAAGTACGCG 300
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 AGCTCCGAGCACCAGCGGGACGACGTGGCGCTCATCCCCTACGAGCGGATGGACGCCTTC 360
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 ATCGCCGGCGAATGCAGCAACCCGGAGTGCCCCACGCGCTTCCACATCGAGCGCGGCCGC 420
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 AAGCGCGACCGCGGCACCCTCCGGGAGGTCAGGAGCGACGACTACCTTCTCTACAGGATG 480
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 TACTGGTGCTCGTTCGGCCCGGAGAATTACGGCGAGGGAGGGACGATCTTGCCGAGCAGG 540
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 AAGTATAGGCTCAACACGAGGAATCGTGCCGCTCGTCCGCAGTCGATGCGTGGCTGCACC 600
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 TGCCACTTTGCCATCAAGCGGCTATATGCCCGCCCGTCCCTGGTGCTCATTATCTACCAT 660
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GAGAGGCGGCATATCAACAAGTCTGGTTTCATATGCCATGGTCCCTTGGACCGGGACGCC 720
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 ATTGGGCCGGGTGCCAGGAGGGTGCCGTATGTGGGGAGCGAGATCCAGCAGCAGACCATG 780
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 TCGCTGATTTACCTTGGTGTGCCGGAGGAGAACATCCTGCAGACACATATGGAAGGGATA 840
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CATCGTTACTGCGGCTCGGACGCGAAGGTTGATAGCCTCGCTTCACAGTATGTCCAGAAG 900
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CTTGGGATGATCATCAAGAGGTCTACGCATGAGCTGGATCTTGATGACCAGGCTAGCATC 960
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 AGAATGTGGGTTGATAGGAACAAGAAGTCTGTGTTCTACTACCAGGATTCGACGGATACA 1020
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GATGCATTTGTTCTAGGGATCCAGACAGAGTGGCAACTGCAGCAGATGATTCGCTTTGGT 1080
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CATCAGGATCTTTTGGCTTCTCATTCCTCGTTTGGTGTTAGCAAGCTGAAGTATCCATTG 1140
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CACACACTCCTTGTCTTTGACTCAAGACAACATGCTCTACCTGTTGCGTGGATTATAACC 1200
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CGATCAGTTACCAAGCAAGACACTTTGAGATGGATGAAAGCACTTACTGAGAGAATATAT 1260
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 TCTGTTGATTCCACCTGGAGAATCGGTGGATTTGTAATTGATGACCCAGCTTCAGAGCTG 1320
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GATCCAATCAGGGATGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGA 1380
consensus_10593#2 -------------------------------------------------ACATTAGGAGA 11
consensus_10593#1 -----AATCAGGGGTGTATTCTCTTGCCCAATTTTGTTTTCTTTATGGCACATTAGGAGA 55
***********
consensus_10593#0 ACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTT 1440
consensus_10593#2 ACCNGGNTTAAAANTATAATCNAGAAATGCAACAACAGTGAGGTACAGCGGGAAATGTTT 71
consensus_10593#1 ACCTGGCTTAAAAATATAATCAAGAAATGCAGCAACAGTGAGGTACAGCGGGAAATGTTT 115
*** ** ****** ******* ********* ****************************
consensus_10593#0 ATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTT 1500
consensus_10593#2 ATGCAACTAGGAAAAGTTATGTACNGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTT 131
consensus_10593#1 ATGCAACTAGGAAAAGTTATGTACAGTATCTGGAGTGAGAAAAATCCCATGGATGCTCTT 175
************************ ***********************************
consensus_10593#0 GAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTT 1560
consensus_10593#2 GAGCAATTATTTCAAGATTTCGTTGACCAAACCACCTTCATACAATATTNCAAGTCCTTT 191
consensus_10593#1 GAGCAATTATTTCAAGACTTCGTTGACCAAACCACCTTCATACAATATTTCAAGTCCTTT 235
***************** ******************************* **********
consensus_10593#0 TGGGTTCCCAAATTG--------------------------------------------- 1575
consensus_10593#2 TGGGTTCCCAAATTG--------------------------------------------- 206
consensus_10593#1 TGGGTTCCCAAATTGAGTAAGAATTTCGGGTAGCTGCTTCAGTTTATGCATCGCATTGTA 295
***************
consensus_10593#0 ------------------------------------------GAGATGTGGATTGACACC 1593
consensus_10593#2 ------------------------------------------GAGATGTGGATTGACACC 224
consensus_10593#1 GATTATTATGCAATGCTAATGATATTCCTAATATGCTTTTTAGAGATGTGGATTGACACC 355
******************
consensus_10593#0 ATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTA 1653
consensus_10593#2 ATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTA 284
consensus_10593#1 ATCAGAAGTCTTCCACTAGCAAGTCAGGAATCATCAGGCACTATTGAAGGTTACCATCTA 415
************************************************************
consensus_10593#0 AAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGG 1713
consensus_10593#2 AAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGG 344
consensus_10593#1 AAGCTCAAGGTTAAAGCATATGATGACTCACAGCTTGATGCTCTCCAGCGTGTGGACTGG 475
************************************************************
consensus_10593#0 TTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGAT 1773
consensus_10593#2 TTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGAT 404
consensus_10593#1 TTGGTGCATAAGCTCACAACAGAGCTCCATTCGAGTTACTGGCTCAATCTGTATGCGGAT 535
************************************************************
consensus_10593#0 GAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGA 1833
consensus_10593#2 GAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGTCCACTTCATGGCATAGA 464
consensus_10593#1 GAAAGCGGTTCATTTCCTGAGGTGAAAGCAGAGTACATTGCGGCCACTTCATGGCATAGA 595
****************************************** *****************
consensus_10593#0 GCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAG 1893
consensus_10593#2 GCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAG 524
consensus_10593#1 GCGCTGCAGATACCTGACGATGCTGTTATATTTGATGACAAGGAACCATTTTCAGCAAAG 655
************************************************************
consensus_10593#0 GTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTT 1953
consensus_10593#2 GTGACAAGCCAGAAGGATACTAGTCAGATGTGGACTGTCTGGAATCCTGGGTCTGAGTTT 584
consensus_10593#1 GTGACAAGGCAGAAGGATACTAGTCAAATGTGGACTGTTATGGATCCTGGG-CTGAAGTT 714
******** ***************** *********** * ******** **** **
consensus_10593#0 TCTCTTTGTGATTGTTCGTGGTCAATGCAGGG-CAACCTATGTAAGCACATCATAAAGGT 2012
consensus_10593#2 TCTCTTTGTGATTGGTCGNGGGCAATGCAGGGGCAACCTATGTAAGCNC-TCATAAAGGG 643
consensus_10593#1 TCTCTTTGTGATTGGTCGTGGTCA-TGCAGGG--AACCTATGTAAG-ACATCATTA---- 766
************** *** ** ** ******* ************ * **** *
consensus_10593#0 TAACATGATGTGTGGACCAC-GCAAGGATTTCCAGCCCTCGCTCTCATTT-CAATCGTTT 2070
consensus_10593#2 TAACATGATGTGTGGACCACCGCAAGGATTTCCAGCCCTCGCTCTCATTTTCNATCGGTT 703
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CAGCGTGTCCTACTTGATCTGTGG-CAAAAACCCATGGATGATTCATTCTCACTCGATCT 2129
consensus_10593#2 CAGCGGGTCCTACTTGATCNGGGGGCAAAAACCCCTGGGTGATTNCNTTTCCCA------ 757
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GTCAGTAGCATGGGTTATGCAAATGCAGGAGAGGATCCAGAAGGTGACTGAGCTTGCTAC 2189
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 CGCTGACGGCATTGCGGAAGTATCTAACAGATTGCCGATTCAATGGACAAACAAGAAAGG 2249
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GAGGAAAGTAGCTGCAAAGCGCACCAGCCCTTTACGTGTTCTTCCTCACTCCAATGGTAT 2309
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 TGTGCAAAAGGATTTCACACCCAAGAAGAACAGAAAGAGAAAGAGGTTGTCAACAGTCTC 2369
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GGGTTAACAGTACTCCAATTGTTCTTGTCCAGAGAGTTATTTTTCTCTCTGTGTAATTAG 2429
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 ATGGCTAACCGTCTTTTGTTTGTTTTCTGTCTCAACTAGTTACTTTTGGTATAGGCATTG 2489
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 GTTACTAGGATGATCACCTCACGTTTCTGAAACCAATTCTTCTGTTGTTTAGTTGGATAT 2549
consensus_10593#2 ------------------------------------------------------------
consensus_10593#1 ------------------------------------------------------------
consensus_10593#0 AATTATTCAGGCAGCATAAGAAATACATCGAATCAGTCTCTCTGGT 2595
consensus_10593#2 ----------------------------------------------
consensus_10593#1 ----------------------------------------------
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||