cluster # 10610

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10610 cluster # 10610 Sequences # 7 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10610#0 length = 1443 sequences # 7
consensusID : consensus_10610#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1443
fasta sequence
                              [CCGCCCGGCCGCGTCCGCCTCCCGGTCTGCCCCCCTCGCGGCGGCGCCGCTGCCGCCGCCGCACCAGGTCTCGCGGCCGTGGCTCCCCGCCGCCGGGTTCCGGTCGTCGGCGGCGGCGTCGGCGGCGGCGCGCGGGGATGACTACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGACGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGACCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAA-GGTCGTCGGAAGTTATGAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGGTTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGTATTCATATTACCTGATTCATATCTTTAT-CCAGAGACAAAGGAGTATGGAGGAGACAAATATGAAAATGGTGTGATCACCCCAAGACCACC-TCCTGTTCA-TTATAGCAAACCTTCAAGGACTGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCAGAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGGCAGAATTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACAATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAAGAGCGCAGGAACTTCAACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCGCCTGGAACTTATGGTCAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACTTATCCTGGAAGCAACCAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGGCAGGGGCCTGGACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCTAGCCAAAGCGAAGGACAACAAGAGAGCTGGC-GGGGAAGGCAATAAGGGCTTTAACATGTGTTCCAGTCACGGACGAGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCA-CCTGTACAATAAATGACTGCGCTGCTTTACTATTTCTTGCTGCTTGCATTCATGTTCTGAAGAATGAGCTAAGCCTAGTACCAACAGTTTAAATGGATGCAGACATTAATTTTGTTGTTTTTAGCCATATTGTCATTTACATCACAAGGGCTCTTCATTTTTAATGATTGGCTTTGGGGGCTATCACTAATTGAATCGTGGCATCGGCCTACAGTTGCTAGTTCCCAGAAGTTGAATCTTATCCC-CTTAAAGATGAACAATATATTGAAGGTTAGCTTTATATAACCTGGTAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CB679773             [CCGCCCGGCCGCGTCCGCCTCCCGGTCTGCCCCCCTCGCGGCGGCGCCGCTGCCGCCGCCGCACCAGGTCTCGCGGCCGTGGCTCCCCGCCGCCGGGTTCCGGTCGTCGGCGGCGGCGTCGGCGGCGGCGCGCGGGGATGACTACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGACGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGACCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAA GGTCGTCGGAAGTTATGAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGGTTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGTATTCATATTACCTGATTCATATCTTTAT CCAGAGACAAAGGAGTATGGAGGAGACAAATATGAAAATGGTGTGATCACCCCAAGACCACC TCCTGTTCA TTATAGCAAACCTTCAAGGACTGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCAGAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGGCAGAATTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACAATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAag                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU062748             [                                                                                                                                             CTACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGACGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGACCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTNCAGACCCTCGCCAA GGTCGTCGGAAGTTATGAAGNGGCTAAGAAGAGGATNTACGNTTTTAGTACAACAACATATNTTGGTTTTCAAGCTGTAATGACTNAGGAGNTGTCAGAAAAGTTCCGTGGATTNCCTGGGGTTGTATTCATATTACCTGNTTCATATCTTTAT CCAGng                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AU197554             [                                                                                                                                              TACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGACGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGACCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAAGGGTCGTCGGAAGTTATGAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGGTTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGTATTCATATTACCTGATTCATATCTTTATCCCAGAGACAAAGGAGTATGGAGGAGACAAATATGAAAATGGTGTGATCACCCCAAGACCACCTTCCTGTTCATTTATAGCAAAacc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C28461               [                                                                                                                                                                                                                                                                                                                                AAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGGTTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGTATTCATATTACCTGATTCATATCTTTAT CCAGAGACAAAGGAGTATGGAGGAGACAAATATGAAAATGGTGTGATCACCCCAAGACCACC TCCTGTTCA TTATAGCAAACCTTCAAGGACTGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCAGAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATG CCCACGGCAGAATTATGCAGATCGTCCAGGTTACAGTGG ACGTCTTGTGGNTACCAAAGTCAAACAACACAATNCC AGGGCAT CAAATCCACTTGGca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF317101             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCAAGACCACC TCCTGTTCA TTATAGCAAACCTTCAAGGACTGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCAGAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGGCAGAATTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACAATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAAGAGCGCAGGAACTTCAACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCGCCTGGAACTTATGGTCAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACTTATCCTGGAAGCAACCAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGGCAGGGGCCTGGACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCTAGCCAAAGCGAAGGACAACAAGAGAGCTGGCGGGGGAAGGCAATAAGGGCTTTAACATGTGTTCCAGTCACGGACGAGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCA CCTGTACAATAAATGACTGCGCTGCTTTACTATTTCTTGCTGCTTGCATTCATGTTCTGAAGAATGAGCTAAGCCTAGTACCAACAGTct                                                                                                                                                                                                                                ]
[-] EMBL CB679774             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGAGGCTATGCCCCACGGCAGAATTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACAATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAAGAGCGCAGGAACTTCAACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCGCCTGGAACTTATGGTCAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACTTATTCTGGAAGCAACCAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGGCAGGGGCCTGGACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCTAGCCAAAGCGAAGGACAACAAGAGAGCTGGC GGGGAAGCCAATAAGGGCTTTAACATGTGTTCCAGTCACGGACGAGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCA CCTGTACAATAAATGACTGCGCTGCTTTACTATTTCTTGCTGCTTGCATTCATGTTCTGAAGAATGAGCTAAGCCTAGTACCAACAGTTTAAATGGATGCAGACATTAATTTTGTTGTTTTTAGCCATATTGTCATTTACATCACAAGGGCTCTTCATTTTTAATGATTGGCTTTGGGGGCTATCACTAATTGAATCGTGGCATCGGCCTACAGTTGCTAGTTCCCAGAAGTTGAATCTTATCCC CTTAAAGATGAACAATATAT                                                ]
[-] EMBL CF317100             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTTTAATCAGTATCCTAGCCAAAGCGAAGGACAACAAAAAAGCTGGC GGGGAAGGCAATAAGGGCTTTAACATGTGTTCCAGTCACGGACGAGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCACCCTGTACAATAAAAGACTGCGCTGCTTTACTATTTTTTGCTGCTTGCATTCATGTTTTGAAGAATGAGGTAAGCCTAGTACCCACAGTTTAAATGGATGCAGACATTAATTTTGTTGTTTTTAGCCATATTGTCATTTACATCCCAAGGGGTTTTCATTTTTAATGATTGGCATGGGTGTTTATCCCTAATTGAATTGTGGCATCGGCCTACAGTTGGTAGTTCCCAGAAGTTGAATTTTATCCCAGATGGA ATGAACCATATATTGAAGGTTAGCTTTATATAACCTGGTAAAAAAAAAAAAAAAAAAAAAA]




>consensus_10610#0
CCGCCCGGCCGCGTCCGCCTCCCGGTCTGCCCCCCTCGCGGCGGCGCCGCTGCCGCCGCC
GCACCAGGTCTCGCGGCCGTGGCTCCCCGCCGCCGGGTTCCGGTCGTCGGCGGCGGCGTC
GGCGGCGGCGCGCGGGGATGACTACGGGAGGCGCGACGTGGACGAGAAGATATCCCCCGA
CGAGATCCTCTTCGAGGGCTGCGACTACAACCACTGGCTCATCACCATGGAGTTCCCCGA
CCCCAAGCCCACCCGCGAGGAGATGATCGAGACCTACCTCCAGACCCTCGCCAAGGTCGT
CGGAAGTTATGAAGAGGCTAAGAAGAGGATGTACGCTTTTAGTACAACAACATATGTTGG
TTTTCAAGCTGTAATGACTGAGGAGATGTCAGAAAAGTTCCGTGGATTGCCTGGAGTTGT
ATTCATATTACCTGATTCATATCTTTATCCAGAGACAAAGGAGTATGGAGGAGACAAATA
TGAAAATGGTGTGATCACCCCAAGACCACCTCCTGTTCATTATAGCAAACCTTCAAGGAC
TGACAGGAACCGTAACTATCGTGGAAATTACCAGAACGGTCCTCCACAGGGAAATTACCA
GAACAGTCCTCCACCATATGGCTCACAGCAAGATGGAAGAGGCTATGCCCCACGGCAGAA
TTATGCAGATCGTCCAGGTTACAGTGGAACGTCTGGTGGCTACCAAAGTCAAACAACACA
ATACCAAGGGCATGCAAATCCAGCTGGACAAGGTCAAGGTTACTACAACTCACAAGAGCG
CAGGAACTTCAACCAGGGGCAGGGAGGCGATTTCAGGCCTGGCGGCCCTTCAGCGCCTGG
AACTTATGGTCAACCACCAGCACCTGGAAATTATGCGCAACCACATCCACCAACTTATCC
TGGAAGCAACCAAGGAGCTCCTGGTGTAAATCCTGGTTATGGTGGAAACAACAGGCAGGG
GCCTGGACCTGCATATGGAGGAGATAACTGGCAAGGGGGTTCTAATCAGTATCCTAGCCA
AAGCGAAGGACAACAAGAGAGCTGGCGGGGAAGGCAATAAGGGCTTTAACATGTGTTCCA
GTCACGGACGAGAGGGCATAATTATGCTGCTTGAAATGTAGAAACTCCCACCTGTACAAT
AAATGACTGCGCTGCTTTACTATTTCTTGCTGCTTGCATTCATGTTCTGAAGAATGAGCT
AAGCCTAGTACCAACAGTTTAAATGGATGCAGACATTAATTTTGTTGTTTTTAGCCATAT
TGTCATTTACATCACAAGGGCTCTTCATTTTTAATGATTGGCTTTGGGGGCTATCACTAA
TTGAATCGTGGCATCGGCCTACAGTTGCTAGTTCCCAGAAGTTGAATCTTATCCCCTTAA
AGATGAACAATATATTGAAGGTTAGCTTTATATAACCTGGTAAAAAAAAAAAAAAAAAAA
AAA
clustalw multiple alignements is not computed in this case