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Oryza sativa
cluster # 10613 cluster # 10613       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10613#0 length = 1244 sequences # 7  

consensusID : consensus_10613#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1244
fasta sequence
                              [AGCGACGAGAAAAAAAAATTTCTTAAAAACAAAACAAAAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT-GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAG]

[+] EMBL CB677548             [AGCGACGAGAAAAAAAAATTTCTTAAAAACAAAACAAAAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB629744             [            AAAAAATTTCTTAAAAACAAAAC  AAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTAAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CF307330             [                                                              AGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL OSS4994A             [                                                                                                                                                                                                                                                                                                           anaggagGAAGNCTGAGGGACATCGCTGCATTGTACAACTGTNAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGANCTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCACCAAAATTGTTGGNTTGAAAAGTATAGCTGCATATAGAAGTGGGCTTAGAGATTGATCCCAATATTAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CF306372             [                                                                                                                                                                                                                                                                                                                                                                                                     TCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTT                                                                                                                                                                                                                                  ]
[+] EMBL CB636473             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGAT                                                                           ]
[+] EMBL CF307329             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAG]


>consensus_10613#0 AGCGACGAGAAAAAAAAATTTCTTAAAAACAAAACAAAAAAAAAAAAATCCTCGAGACAC CGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCC CGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGG CGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCC GCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCT TCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGG TGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTG CCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGG AGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAG AAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTG AAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAG CTGCATATAGAAGTGGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATG GACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTG ACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTC ACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTG CTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATC CATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTG GCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTG AGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACAT ATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTG AAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)