These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1244 fasta sequence [AGCGACGAGAAAAAAAAATTTCTTAAAAACAAAACAAAAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT-GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAG] [+] EMBL CB677548 [AGCGACGAGAAAAAAAAATTTCTTAAAAACAAAACAAAAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAAATGC ] [+] EMBL CB629744 [ AAAAAATTTCTTAAAAACAAAAC AAAAAAAAAAATCCTCGAGACACCGAGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTAAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGC ] [+] EMBL CF307330 [ AGCGAGTGAGCGAGCGGCGGCGAGGCGGCCACCGACGACGACCGCCGGAGCCGGAGCCCGGCGGAGATGGAGATGGAGTCCAAGTACGCGGCGCTGCGGCGCGCGGCGGAGGAGGCGGCGGCGGTGGACGCGCACGCGCACAACCTCGTCGCCGACGGCTCCGCGTTCCCCTTCCTCCGCTGCTTCTCCGAGGCCGACGCCGCCGACGCCCTCGCCCTCGCTCCCCACACCCTCTCCTTCAAGAGAAGCCTGAGGGACATCGCTGCATTGTACAACTGTGAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATC ] [+] EMBL OSS4994A [ anaggagGAAGNCTGAGGGACATCGCTGCATTGTACAACTGTNAAGCTTCACTTGAGAAGGTGGAGGAGTTCAGAAGGGCTGAAGGGTTGTCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGANCTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCACCAAAATTGTTGGNTTGAAAAGTATAGCTGCATATAGAAGTGGGCTTAGAGATTGATCCCAATATTAGC ] [+] EMBL CF306372 [ TCGTCTATAAGCTCAAAGTGCTTCAAGGCTGCCAACTTATCTGCAATTCTTATAGATGATGGCATAGACTTTGACAAGATGCTTGAACTGGAGGCACACAAGGCGTTTGCTCCTACAGTTGGCAGAATTCTGAGGATTGAAAAGCTGGCAGAAACAATTATTAATGATGAATCATTCAGCGCATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTT ] [+] EMBL CB636473 [ CATCAAGCTGGACACTTGACTCTTTTACTGAAATTTTTGTCACTAAGCTGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGAT ] [+] EMBL CF307329 [ TGAAATCAGTTGCCAACAAAATTGTTGGATTGAAAAGTATAGCTGCATATAGAAGT GGCTTAGAGATTGATCCAAATATTAGCAAGACAGATGCAGAGGATGGACTACGTAAGGAGTTATCAGGTCAGAGGCCTCTTCGGATTACAAATAAGAACCTGATTGACTATCTATTTACTTGCAGTCTTGAAATTGCTGTATCATATCACCTGCCAATGCAGATTCACACAGGATTTGGAGATAAGGACCTGGACTTGCGAAAGTGCAACCCTCTCCATCTGCGTGCTGTTCTTGAGGACACAAGATTCTCTAAGTGCCAAATTGTTCTTTTACATGCCTCTTATCCATTTTCAAAGGAAGCATCATATCTAGCATCAGTGTACTCCCAGGTATACCTTGATTTTGGCTTGGCAATTCCAAAACTTAGTGTTCAAGGAATGACATCATCAATTAAAGAGCTCCTTGAGCTAGCTCCCATAAAGAAGGTCATGTTCAGCACAGATGGTTATGCTTTTCCAGAGACATATTACCTAGGTGCAAGGAGGGCACGTGATGTTGTTTATCGTGTACTCTCAGCTGCATGTGAAGATGGTGACCTTAGCATTCAAGAAGCTATTGAAGCAGTTGAG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||