These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10620#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1424 fasta sequence [TGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGCCGTTTTCATGACAGTATTACTTTTAGAAAGTACATATATGTGTGCTGTAAAGAAATACTTTGATGACAATAAGTCACT] [+] EMBL AK067453 [TGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGC ] [+] EMBL CF297008 [ AGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCG ] [+] EMBL CF297403 [ TTAGCTAGTAACAACTCAAACATTGTAAGCGCACAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCTTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACG ] [+] EMBL CB657192 [ TGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGNCAAATGAGACGTGCACCACTGACCTCAA ] [-] EMBL CB657193 [ ACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGCCGTTTTCATGACAGTATTACTTTTAGAAAGTACATATATGTGTGCTGTAAAGAAATACTTTGATGACAATAAGTCACT] [-] EMBL CF297402 [ CAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGACCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTAaaa ] [-] EMBL CF297009 [ CGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||