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Oryza sativa
cluster # 10620 cluster # 10620       Sequences # 7       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10620#0 length = 1424 sequences # 7  

consensusID : consensus_10620#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1424
fasta sequence
                              [TGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGCCGTTTTCATGACAGTATTACTTTTAGAAAGTACATATATGTGTGCTGTAAAGAAATACTTTGATGACAATAAGTCACT]

[+] EMBL AK067453             [TGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGC                                                                              ]
[+] EMBL CF297008             [      AGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAAGCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CF297403             [                                TTAGCTAGTAACAACTCAAACATTGTAAGCGCACAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACTAATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCTTCGTCGTTTTCACTTGCTGCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CB657192             [                                                                                                                                                                                                                                  TGGAGGCAGCTCGCAAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAGTGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAGGTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGCCCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTACGGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGGACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAGAACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGNCAAATGAGACGTGCACCACTGACCTCAA                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB657193             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATCCACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCCACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATCACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTACTATGCCGTTTTCATGACAGTATTACTTTTAGAAAGTACATATATGTGTGCTGTAAAGAAATACTTTGATGACAATAAGTCACT]
[-] EMBL CF297402             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGACCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTAGCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTATCAGTGTTTGTTATATTTTAaaa                                                                                 ]
[-] EMBL CF297009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CGAAGACCGCGCGCTGGGCACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCTCCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTCGACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAATGAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAGCACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGATATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAACCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAAaa                                                                                                                                                                          ]


>consensus_10620#0 TGAGCAAGTGAGCAACTGGCTAGGTTACCTGGTTAGCTAGTAACAACTCAAACATTGTAA GCGCATAGAGGAGTCTGGTGCTCTACTCAACTCTGAAACAATCAACTGCACCAGTGTACT AATTAAATATATTACTGTACTTAAGACATGGCTATCGCGTCGTCGTCGTTTTCACTTGCT GCTATCCTCCTCATCATCATCATGTACTGCTGCCCCACGGGTTTGGTGGAGGCAGCTCGC AAGGGGCCGGCTGCTGCCGGCGGCGGCGACGACAGCGCGATGAGGGAGAGGTACGAGAAG TGGGCGGCGGACCATGGGCGCACGTACAAGGACTCCCTGGAGAAGGCGCGGCGATTCGAG GTATTCAGGACCAACGCCCTGTTCATCGATTCGTTTAATGCTGCAGGAGGCAAGAAGAGC CCCCGGCTGACGACCAACAAGTTCGCCGACCTGACAAACGAAGAGTTCGCGGAGTACTAC GGTAGGCCGTTTAGCACGCCTGTAATTGGAGGTAGTGGCTTCATGTACGGGAACGTGAGG ACCTCAGACGTGCCAGCCAACATAAACTGGAGGGATAGAGGCGCTGTCACCCAAGTCAAG AACCAAAAGGATTGTGCGAGCTGTTGGGCGTTCTCAGCGGTGGCAGCGGTGGAAGGCATC CACCAGATCAGGAGTCACAATCTGGTTGCCCTCTCGACGCAGCAACTGTTGGACTGCTCC ACCGGGAGGAACAACCATGGCTGCAACCGCGGCGACATGGACGAAGCGTTCCGCTACATC ACCAGCAACGGCGGCATCGCCGCCGAGTCAGACTACCCCTACGAAGACCGCGCGCTGGGC ACCTGCCGCGCCTCAGGGAAACCGGTGGCGGCCTCCATCAGAGGCTTCCAGTATGTCCCT CCGAACAACGAGACCGCCCTCCTGCTGGCCGTCGCCCACCAGCCTGTGTCCGTGGCACTC GACGGCGTGGGCAAGGTGTCCCAGTTCTTCAGCAGCGGAGTGTTTGGCGCGATGCAAAAT GAGACGTGCACCACTGACCTCAACCATGCCATGACGGCGGTGGGGTACGGCACCGACGAG CACGGCACCAAGTACTGGCTAATGAAGAACTCGTGGGGAACCGACTGGGGCGAGGGAGGA TATATGAAGATCGCGCGGGATGTCGCGTCCAACACCGGCCTTTGCGGCCTCGCCATGCAA CCCTCTTACCCCGTTGCCTAATAAACTAAAGAGACATAAATTGAGCCGATAACCGTGTTA GCGTCTGGTGAAAAAGTAGTACGGCGTGGTGTAATATGCGATTCATGTGATAAATTATTA TCAGTGTTTGTTATATTTTACTATGCCGTTTTCATGACAGTATTACTTTTAGAAAGTACA TATATGTGTGCTGTAAAGAAATACTTTGATGACAATAAGTCACT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)