These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10625#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2666 fasta sequence [GACGCGTCCAAGCAGAATCCCAAATCCCAAGCCCTCTCTCTCTCTCGCTCGCTCACGCAGGAGCGAGAGATCCCACTCTCTCCCCACCATTTCCCCCCCCCCCCTCTGTGTCCCCTCCTCCTCCTCTACACCTGGTTGGGCATGGCGCTGCGGCGCGGGTGGAGACGAGCGGCGGCGGCGGTTGTTCTTCCTGCCGCCTCCGTGGAGTGAACCACCGACGACGACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAACTATGATGATAAAATT-ACAATCATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCCCTTGCAGTAGTGCCAAAGAAGGGTTTCCGCATTTCAGAGACTCCATTACATGAATTCCAAGGCCATACAGATGATATCCTGGATATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCATCAAAAGATAAGATGGTGCGTTTGTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTTAAACACAAAGACTACGTGACATGTGTTCAATTCAATCCTATCGATGAAAGATACTTCATCAGTGGTTCAATAGATGGAAAAGTTCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGACTGGACTGATACACGGAAGATCATAACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACTACTTCTGGAGAATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAACTAGACAAAGAATTGTTTATGCAAGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTGCAGTCACGTTCAAGTGATTCCTCTAGGATTACAATAACATCAACGGGTTCCAAAATTCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT-TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA-GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGTGAGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTCCCTCTTGTCCNAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK067483 [GACGCGTCCAAGCAGAATCCCAAATCCCAAGCCCTCTCTCTCTCTCGCTCGCTCACGCAGGAGCGAGAGATCCCACTCTCTCCCCACCATTTCCCCCCCCCCCCTCTGTGTCCCCTCCTCCTCCTCTACACCTGGTTGGGCATGGCGCTGCGGCGCGGGTGGAGACGAGCGGCGGCGGCGGTTGTTCTTCCTGCCGCCTCCGTGGAGTGAACCACCGACGACGACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACGTCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAACTATGATGATAAAATT ACAATCATCAAAACGGAACTAGGAAGAGGGAAGAATCATGCCCTTGCAGTAGTGCCAAAGAAGGGTTTCCGCATTTCAGAGACTCCATTACATGAATTCCAAGGCCATACAGATGATATCCTGGATATGGCATGGTCAGAGTCAGATTATCTCTTGACCTCATCAAAAGATAAGATGGTGCGTTTGTGGAAAGTTGGCTGTGATGGTTGTCTTGGACTGTTTAAACACAAAGACTACGTGACATGTGTTCAATTCAATCCTATCGATGAAAGATACTTCATCAGTGGTTCAATAGATGGAAAAGTTCGTGTTTGGGATGCTTTGGATAAGAGAGTAGTTGACTGGACTGATACACGGAAGATCATAACTGCTCTTAGTTACCAACCGGATGGAAAGGGCTTTATTGTTGGCACTACTTCTGGAGAATGCCGCTTTTACGATCAATCAGGTGAAAACATCCAACTAGACAAAGAATTGTTTATGCAAGGGAAGAAGTCTGCTGTCCATCGGGTCAACAGTCTGCAGTCACGTTCAAGTGATTCCTCTAGGATTACAATAACATCAACGGGTTCCAAAATTCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGTGAGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTC ] [+] EMBL AU166637 [ ACGACGAACAAGATGACATTTTGAGCACCGCGTGCTAACTTCACAGAGGGTGAGAGAACCCCCCTCTGTGTTGATTCTTTTTCTTGGGCTAGAAGTATTTCGGTTAGATATGCCAAGTTCCGAATCAGACAGGGATGATATCTTCTTTGATGCATTTGATGATGTTACTTCAACAAGGGAGCCTTCATTGTCAGATGATTGCAGCACAAGTGACGAAGGATTAGCATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAG ] [+] EMBL CB632095 [ CATCAAGGAGATTTGAGTATGATATTTGGGGAAACGAGCCAATGAGTGTTGAAGAAAGGCGGCAAAGGTTCCTGAAGGGAATGGGGTTTGATGAATTTCTTGCTACCAGAGTGGATTTTTCTCAACCACAGGGAGAAATCACAACTGTTGGTCCTTTCGCTGACTTGGGGTTGGAGGAGAGTACTACCAGTGACATTTCTTCCGTGAATTCATCTGTTCCTGAGAATGAATCAGTTTCTGATGCCTCCTGTTGCATAGGAGATATTGACAGTGGCGAGAGATACACAGTTCAGAATGATGGATACGGCGAATTGACTAGCATGCTTAAGGATGTGGCATCACATAAGGTGGTGTCTCTTCTGGAGTTTGATGGCGTACCAGGCCTTTCTCAATCTGTTCAAAAGTTGTTGCGCAAGGTGTATAGCAGTTCTATGGAAGAGAAAAAGAATGTGTTTAATAAGAAAAAGGGTGTCAAGAGCTTGTGGAAGAGCTTCATGAAAAACAGGAGTTTTGGTGGAATTTGCAAGCACGACATCAATGTAAAAAACTGCACAATAGGCATACCATCCAGAACAAAAGTTCAACATCGAAAGAAAAAAACTATGGAATTTTCTGCTGTCCATCTGGGTCAAGAAATCCAAGCTCACAAGGGTTTAATTAAAGTCATGAAATTCAGCCCGTCAGGCTGGTATTTGGCAACTGGTGGTGAGGACTGCATTGTACGGATATGGCAGATTATGGAAGTGGAAGCATCTTCGAAGTTGCATGGGGGAGACAACCCTCAGAATTATGATGATAAAATTCACA ] [-] EMBL CB632096 [ TCGAGTTGCCGATGGTGTTGATATCATTCAAAAGTTTGAAGGGCCTTGGAATTTGAAGGCTCTTTCTTCACCATCTTTAACATCAGATGGAAGATATCTCATATCTGCCGGATTGGATTCCAATGTCTACATCTGGAACTTTGACATTCCAAGTGTCGCCGATCATAAAGGCGAAGCTAAATCGGTTCGCTCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCTATTTTGCACCGCCACGGGGAACGCCGTTCCCCCGCAGCGCGGTGT TTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGAGGAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCA GGTCTTTCCACAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTGTGATTTGCGTGCGTGCGTGAGTGTGTTCGCTGAAGAAGAAGCTACAGAAAACTGTAGCTTTGGTGATAGCCTTTACTAACACAGTAAAGTTTTTTTGTTGGTAGTAGATGGTAGGAAGGGGGGGAGAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATCTGAACTTGTGGTGC ] [+] EMBL OSC543 [ TCCTGTGAGAAATTCTTCTCCAAGGACGTGACAACCGCGGTACCATGGCCCGGGCTGCATCAAGAAAGACAGCAGGTGAAGAATTCTTCCAGCCTGACTGAAGAATCCGTCAGTTCACCCATTTTGCACCGCCACGGGGAACGCCGTT CCCCGCAGCG GTNGTNTTCGCTGACGGCATGAAGGGTACTCCGACATGGCCGGA GAGAAGCTTCCACCTGCAAAAGCCGCTGATGCCCCACGACTGTCTGACTGTCTCTCCACGATCTCGCCTGCTTGGAACACGGTGATCGTGACTGCAAGTCGAGACGGTGTGATCAGGGTCTTTNCACAACTACG ] [+] EMBL AU166636 [ CTCCACGATNTCGCCTGCTTGGAACNCGGTGATCGTGACTGCAAGTCGANACGGTGTGATCA GGTCTTTCCNCAACTACGGCTTGCCTGTGAGATTGTGATGATCTGCAAATGCAAGGCAATCAGCTTTGGTATAGTCTGACTCTGATTTGCGNGCGTGCGTNAGTGTGTTCGCTGAANAANAAGCTACAGAAAACTGTAGCTTTGGTGANAGCCTTTACTAACCCAGTAAAGTTTTTTTGTTGGTAGTANATGGTAGGAAGGTNAGGAAAGGATCTTATTTTTTTTGTACTGCGAATTCAGAATNTGAACTTGTGGTGCTTGTCGAAATGAGGTGGTCAATCCAGAAGCGTTTTTTCCCTCTTGTCCNAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL CF333653 [ ACTGCGAATTCAGAATCTGAACTTGTGGTGCTTGTCGAAACGAGGTGGTCAATCCAGAAGCGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||