Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10627 cluster # 10627       Sequences # 7       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10627#0 length = 2750 sequences # 3  
consensus_10627#1 length = 797 sequences # 1  
consensus_10627#2 length = 722 sequences # 1  
consensus_10627#3 length = 694 sequences # 1  
consensus_10627#4 length = 694 sequences # 1  

consensusID : consensus_10627#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2750
fasta sequence
                              [TCCTCCGATTCGGGCGGCGGCGGGAACGACGATGACGACGACGACGAGGCGCTCTGCGCGATCATGCGGCGAGCTAGGGAGAAGAAGCGGAAGCGGAGGCTGCAGGAGGAGGCGGCGGGGGCTGCTTCTGCTCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGACGCGTGATTCCGAGGGAAACTTCACCAGAAAGGAAGCACATGACAAGACAAATTTGCCTGGTGGATTGGATACTCCTCAAGCGTCAAGGAGACCTGATGGTGTACACCATGCAAGAACAGACGAGGAAAGGTCTCCAGACTCAAAGAGAAGGAAGAAGGTAAAGATCACTAACTTAGATAAGAACAACAACAAGAAGATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCATGACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCCGTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGCCGCAAATCAGTGAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGC-TTGGTA-TTAACAAGC--AAAATATCTGCAAGCTGTTCTCGGATGC-TTTGGCGTCATCGTCGTCATCATCCACGGACATGTCCAGTGAAGGGGACAAGCACATAGCTGCAGAAAGCTGTAGTTCTCATATGCCGGAGACAGCAACTAAAGAAGCAAGCAAGAGTACAGATCATGAGGATTCTCTTGAGCTCACCAGCACACAGTTGTCCTCCCATTTGTTTGATCTGAATGAGGCACTGCCAGAATCTACTGATTTGAACTACCCATATGTGTCAAATCCAGAGGAGCCAAATCATGAGCCTAGACAGCATGAGCCTTTAGACTCTGATGTGCAAGTTATTGACGAAGGAGGACAAAACCAGCAGGATCTGTCTTTGGATTCACATGGACTTCAATGTCAGTCCGTTCCTGAGTCTGGGTTAGAAAGAGCTAGAAGTTCAATATCGCCAGGCACATTTTTGCACGGTGAGTTCATGGAAGTGTCTGACACATTTTTTGTTGGTTCTTCACGGAAGTTGACAGAACTTGCTGAGTCTCATGGTGATTGTAGTAGTGGTTCGGTTAAAGATGCTATGACAAAGGGGAAGTCACCTTGTGCATTGCCCAATCATACAGTTCAGGACTCATTTCAGCAGCACCAGAGGTATTATGCCTTCAATCTGAATCTTGGAGGCAGTCAGCCCTCCAATGAAGGGGAAGTTCCTCCCCAAGACTGTAATGCATCTGCCGGAGCGGCTTCAAGTTCTCATGCTGAAATGGGTGTGCAGCAGGGGTGTAGGCCTGCTCCAGGACAAACTGTGCGTCTAATGGGCAAAGATCTTGCAGTATCTACAACCAGAGGAGAGTATGTGTCTGGGACACATTCCTATACTGAAGACCATCCCACAAAGTTGTTCTTGGAATTGCCGCGACAAGGACGGCCTTATCTCTCTTTACAAGCTCAAAGTGTGCCCAATGTTTCAGCAAATTCTGCAAGCCCAAGTCAATCACATATCAGGTACACTGCCCCACAGAATTTGAGCCACTCATTCCCCATGGCCAATGCATTATCTGGAGATCGATTGCAATACGACGATCGGTTCAGCTACTTGTCAGGCTCACAGCACCATGGAAATGTTCTGCTGGGGAGTCCATCACTTACAAGTCATGGCAGTGCAGCGCTCCGTCAGAATTTGCCGTATGTTTGGAGCCGTTACTCTGATCCTTCTTCATCCAGTACTGCATCACCCTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCAGTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCACCCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCTGGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCAGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGTAGAGTAGGTGGTCAATCCAAGAAGATGATGCTGCTGCTGCTGCATAGTGCTATAAAAATACCAGCACATAATGCTGCTGGCCTGGACTAGTCTTTCACTATCTTTGTACTCCCAATTCTCAAACAGATAGCTTTGCAATTGAGTCAGGGAGAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCAGGAGCCATGGAAGAAGGGCAAGACAGCAAGGAGGTGAACGTGCTCTTCGCAGGGTATGTGTTGAAGTAAATCATAAAATTTCACAGTTAACTACGTGCTGTTGATGCCGCATTAGTAGTAGTTGTTCGGTATTCTTTTTCGTTTATGCTTATACTTATCAGCCACAGTTTGAATTTTTAAAATTAAATTTGAAAT]

[+] EMBL CB644712             [TCCTCCGATTCGGGCGGCGGCGGGAACGACGATGACGACGACGACGAGGCGCTCTGCGCGATCATGCGGCGAGCTAGGGAGAAGAAGCGGAAGCGGAGGCTGCAGGAGGAGGCGGCGGGGGCTGCTTCTGCTCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGACGCGTGATTCCGAGGGAAACTTCACCAGAAAGGAAGCACATGACAAGACAAATTTGCCTGGTGGATTGGATACTCCTCAAGCGTCAAGGAGACCTGATGGTGTACACCATGCAAGAACAGACGAGGAAAGGTCTCCAGACTCAAAGAGAAGGAAGAAGGTAAAGATCACTAACTTAGATAAGAACAACAACAAGAAGATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCATGACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCCGTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGCCGCAAATCAGTGAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGC TTGGTA TTAACAAGC  AAAATATCTGCAAGCTGTTCTCGGATGC TTTGGCGTCATCGTCGTCATCATCCACGGACATGTCCAGTGAAGGGGACAAGCACATAGCTGCAGAAAGCTGTAGTTCTCATATGCCGGAGACAGCAACTAAAGAAGCAAGCAAGAGTACAGATCATGAGGATTCTCTTGAGCTCACCAGCACACAGTTGTCCTCCCATTTGTTTGATCTGAATGAGGCACTGCCAGAATCTACTGATTTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU062573             [                                                                                                                                                                                                                          GCCTGGTGGATTGGATACTCCTCAAGCGTCAAGGAGACCTGATGGTGTACACCATGCAAGAACAGACGAGGAAAGGTCTCCAGACTCAAAGAGAAGGAAGAAGGTAAAGATCACTAACTTAGATAAGAACAACAACAAGAAGATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCATGACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCCGTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGCCGCAAATCAGTNAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGCTTTGGTATTTAACAAGCCAAAAATATCTGCAAGCTGTTCTCGGATGCTTTTGGCGTCATCGTCGTCATCATCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK106359             [                                                                                                                                                                                                                                                                                                                                                  AGATAAGAACAACAACAAGAAGATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCATGACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCCGTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGCCGCAAATCAGTGAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGC TTGGTA TTAACAAGC  AAAATATCTGCAAGCTGTTCTCGGATGC TTTGGCGTCATCGTCGTCATCATCCACGGACATGTCCAGTGAAGGGGACAAGCACATAGCTGCAGAAAGCTGTAGTTCTCATATGCCGGAGACAGCAACTAAAGAAGCAAGCAAGAGTACAGATCATGAGGATTCTCTTGAGCTCACCAGCACACAGTTGTCCTCCAATTTGTTTGATCTGAATGAGGCACTGCCAGAATCTACTGATTTGAACTACCCATATGTGTCAAATCCAGAGGAGCCAAATCATGAGCCTAGACAGCATGAGCCTTTAGACTCTGATGTGCAAGTTATTGACGAAGGAGGACAAAACCAGCAGGATCTGTCTTTGGATTCACATGGACTTCAATGTCAGTCCGTTCCTGAGTCTGGGTTAGAAAGAGCTAGAAGTTCAATATCGCCAGGCACATTTTTGCACGGTGAGTTCATGGAAGTGTCTGACACATTTTTTGTTGGTTCTTCACGGAAGTTGACAGAACTTGCTGAGTCTCATGGTGATTGTAGTAGTGGTTCGGTTAAAGATGCTATGACAAAGGGGAAGTCACCTTGTGCATTGCCCAATCATACAGTTCAGGACTCATTTCAGCAGCACCAGAGGTATTATGCCTTCAATCTGAATCTTGGAGGCAGTCAGCCCTCCAATGAAGGGGAAGTTCCTCCCCAAGACTGTAATGCATCTGCCGGAGCGGCTTCAAGTTCTCATGCTGAAATGGGTGTGCAGCAGGGGTGTAGGCCTGCTCCAGGACAAACTGTGCGTCTAATGGGCAAAGATCTTGCAGTATCTACAACCAGAGGAGAGTATGTGTCTGGGACACATTCCTATACTGAAGACCATCCCACAAAGTTGTTCTTGGAATTGCCGCGACAAGGACGGCCTTATCTCTCTTTACAAGCTCAAAGTGTGCCCAATGTTTCAGCAAATTCTGCAAGCCCAAGTCAATCACATATCAGGTACACTGCCCCACAGAATTTGAGCCACTCATTCCCCATGGCCAATGCATTATCTGGAGATCGATTGCAATACGACGATCGGTTCAGCTACTTGTCAGGCTCACAGCACCATGGAAATGTTCTGCTGGGGAGTCCATCACTTACAAGTCATGGCAGTGCAGCGCTCCGTCAGAATTTGCCGTATGTTTGGAGCCGTTACTCTGATCCTTCTTCATCCAGTACTGCATCACCCTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCAGTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCACCCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCTGGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCAGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGATGGGTTTCGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGTAGAGTAGGTGGTCAATCCAAGAAGATGATGCTGCTGCTGCTGCATAGTGCTATAAAAATACCAGCACATAATGCTGCTGGCCTGGACTAGTCTTTCACTATCTTTGTACTCCCAATTCTCAAACAGATAGCTTTGCAATTGAGTCAGGGAGAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCAGGAGCCATGGAAGAAGGGCAAGACAGCAAGGAGGTGAACGTGCTCTTCGCAGGGTATGTGTTGAAGTAAATCATAAAATTTCACAGTTAACTACGTGCTGTTGATGCCGCATTAGTAGTAGTTGTTCGGTATTCTTTTTCGTTTATGCTTATACTTATCAGCCACAGTTTGAATTTTTAAAATTAAATTTGAAAT]


>consensus_10627#0 TCCTCCGATTCGGGCGGCGGCGGGAACGACGATGACGACGACGACGAGGCGCTCTGCGCG ATCATGCGGCGAGCTAGGGAGAAGAAGCGGAAGCGGAGGCTGCAGGAGGAGGCGGCGGGG GCTGCTTCTGCTCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGACGCGTGATTCCGAGGGA AACTTCACCAGAAAGGAAGCACATGACAAGACAAATTTGCCTGGTGGATTGGATACTCCT CAAGCGTCAAGGAGACCTGATGGTGTACACCATGCAAGAACAGACGAGGAAAGGTCTCCA GACTCAAAGAGAAGGAAGAAGGTAAAGATCACTAACTTAGATAAGAACAACAACAAGAAG ATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCAT GACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCC GTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGC CGCAAATCAGTGAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGCTTGGTATTAACAAG CAAAATATCTGCAAGCTGTTCTCGGATGCTTTGGCGTCATCGTCGTCATCATCCACGGAC ATGTCCAGTGAAGGGGACAAGCACATAGCTGCAGAAAGCTGTAGTTCTCATATGCCGGAG ACAGCAACTAAAGAAGCAAGCAAGAGTACAGATCATGAGGATTCTCTTGAGCTCACCAGC ACACAGTTGTCCTCCCATTTGTTTGATCTGAATGAGGCACTGCCAGAATCTACTGATTTG AACTACCCATATGTGTCAAATCCAGAGGAGCCAAATCATGAGCCTAGACAGCATGAGCCT TTAGACTCTGATGTGCAAGTTATTGACGAAGGAGGACAAAACCAGCAGGATCTGTCTTTG GATTCACATGGACTTCAATGTCAGTCCGTTCCTGAGTCTGGGTTAGAAAGAGCTAGAAGT TCAATATCGCCAGGCACATTTTTGCACGGTGAGTTCATGGAAGTGTCTGACACATTTTTT GTTGGTTCTTCACGGAAGTTGACAGAACTTGCTGAGTCTCATGGTGATTGTAGTAGTGGT TCGGTTAAAGATGCTATGACAAAGGGGAAGTCACCTTGTGCATTGCCCAATCATACAGTT CAGGACTCATTTCAGCAGCACCAGAGGTATTATGCCTTCAATCTGAATCTTGGAGGCAGT CAGCCCTCCAATGAAGGGGAAGTTCCTCCCCAAGACTGTAATGCATCTGCCGGAGCGGCT TCAAGTTCTCATGCTGAAATGGGTGTGCAGCAGGGGTGTAGGCCTGCTCCAGGACAAACT GTGCGTCTAATGGGCAAAGATCTTGCAGTATCTACAACCAGAGGAGAGTATGTGTCTGGG ACACATTCCTATACTGAAGACCATCCCACAAAGTTGTTCTTGGAATTGCCGCGACAAGGA CGGCCTTATCTCTCTTTACAAGCTCAAAGTGTGCCCAATGTTTCAGCAAATTCTGCAAGC CCAAGTCAATCACATATCAGGTACACTGCCCCACAGAATTTGAGCCACTCATTCCCCATG GCCAATGCATTATCTGGAGATCGATTGCAATACGACGATCGGTTCAGCTACTTGTCAGGC TCACAGCACCATGGAAATGTTCTGCTGGGGAGTCCATCACTTACAAGTCATGGCAGTGCA GCGCTCCGTCAGAATTTGCCGTATGTTTGGAGCCGTTACTCTGATCCTTCTTCATCCAGT ACTGCATCACCCTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCA GTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCAC CCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCT GGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCT GCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCG ATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGC ACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCAGCA ACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGAC ATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGATGGGTTTCGTCTTT GCGCACGGCTGCCTGCATCAACACTCATGTAGAGTAGGTGGTCAATCCAAGAAGATGATG CTGCTGCTGCTGCATAGTGCTATAAAAATACCAGCACATAATGCTGCTGGCCTGGACTAG TCTTTCACTATCTTTGTACTCCCAATTCTCAAACAGATAGCTTTGCAATTGAGTCAGGGA GAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCAGGAGCCATGGAAGAAGGGCAAGACA GCAAGGAGGTGAACGTGCTCTTCGCAGGGTATGTGTTGAAGTAAATCATAAAATTTCACA GTTAACTACGTGCTGTTGATGCCGCATTAGTAGTAGTTGTTCGGTATTCTTTTTCGTTTA TGCTTATACTTATCAGCCACAGTTTGAATTTTTAAAATTAAATTTGAAAT



consensusID : consensus_10627#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 797
fasta sequence
                              [TTTTTTTTTTGAAAAAACATTAGCATCACGGTGATTGGACTGTTGCTGCAAATTCGAGAGACAGAACGGCTTCAATTCTGTCTATATCTATATCATTAACTCCTACGCGAGCTCCTCCTGAGGAAGGAGCCGGACTTGGCGATCACACGCAGCGTCTTGTCGGTGAAGCGGAGCAGGTTGTAGGCCCACGCGCCGCACACCGCCCCGCTCACCGGCGCCGCCACGTACACCCACACACCGCCGTACCTCCCCGCCACCATCGCCGGACCAAGGCTCCGAGCCGGGTTCATCGACGCCCCCGTCACCGGCCCTGCGAAGAGCACGTTCACCGCGACCGTCGCACCGACAGCGAGCCCAGCCAATTCACCGATTGCTCTGTTGTCCGTGGCGACGCTGGAGACGACGAACATGAGGAAGAAAGAGATGACGAACTCCAGCGCCGCCGCCTGCGCCATCGACCCCGCCGGCGTCGTCCCCAAGAACAAGTGCTCCCCCCGCGCGCTGCCGCCGCCGCCGAACACCACGCGCAGCGTCAGGCTTGCCATGGTGGATCCCAGCACCTGGGCCACCACGTACGATGGCACCTGCACCCCCACACACACACATTGATCACCACAAATGAGTTATTGGCAGTAAATTTAACCGAAACATAATCCGATCCATCGTTTGCTCCACGGCTGATAAGCCCTGCTTCCACGGGAAGCATCCTTACGTGGCGAAGGCGACGGTAACGGCGGGGTTGAGGTGGGTGCCGGAGATGTGGCCGACGGAGTAGACCAGCACCGTGACGACGAGCC]

[+] EMBL CB644713             [TTTTTTTTTTGAAAAAACATTAGCATCACGGTGATTGGACTGTTGCTGCAAATTCGAGAGACAGAACGGCTTCAATTCTGTCTATATCTATATCATTAACTCCTACGCGAGCTCCTCCTGAGGAAGGAGCCGGACTTGGCGATCACACGCAGCGTCTTGTCGGTGAAGCGGAGCAGGTTGTAGGCCCACGCGCCGCACACCGCCCCGCTCACCGGCGCCGCCACGTACACCCACACACCGCCGTACCTCCCCGCCACCATCGCCGGACCAAGGCTCCGAGCCGGGTTCATCGACGCCCCCGTCACCGGCCCTGCGAAGAGCACGTTCACCGCGACCGTCGCACCGACAGCGAGCCCAGCCAATTCACCGATTGCTCTGTTGTCCGTGGCGACGCTGGAGACGACGAACATGAGGAAGAAAGAGATGACGAACTCCAGCGCCGCCGCCTGCGCCATCGACCCCGCCGGCGTCGTCCCCAAGAACAAGTGCTCCCCCCGCGCGCTGCCGCCGCCGCCGAACACCACGCGCAGCGTCAGGCTTGCCATGGTGGATCCCAGCACCTGGGCCACCACGTACGATGGCACCTGCACCCCCACACACACACATTGATCACCACAAATGAGTTATTGGCAGTAAATTTAACCGAAACATAATCCGATCCATCGTTTGCTCCACGGCTGATAAGCCCTGCTTCCACGGGAAGCATCCTTACGTGGCGAAGGCGACGGTAACGGCGGGGTTGAGGTGGGTGCCGGAGATGTGGCCGACGGAGTAGACCAGCACCGTGACGACGAGCC]


>consensus_10627#1 TTTTTTTTTTGAAAAAACATTAGCATCACGGTGATTGGACTGTTGCTGCAAATTCGAGAG ACAGAACGGCTTCAATTCTGTCTATATCTATATCATTAACTCCTACGCGAGCTCCTCCTG AGGAAGGAGCCGGACTTGGCGATCACACGCAGCGTCTTGTCGGTGAAGCGGAGCAGGTTG TAGGCCCACGCGCCGCACACCGCCCCGCTCACCGGCGCCGCCACGTACACCCACACACCG CCGTACCTCCCCGCCACCATCGCCGGACCAAGGCTCCGAGCCGGGTTCATCGACGCCCCC GTCACCGGCCCTGCGAAGAGCACGTTCACCGCGACCGTCGCACCGACAGCGAGCCCAGCC AATTCACCGATTGCTCTGTTGTCCGTGGCGACGCTGGAGACGACGAACATGAGGAAGAAA GAGATGACGAACTCCAGCGCCGCCGCCTGCGCCATCGACCCCGCCGGCGTCGTCCCCAAG AACAAGTGCTCCCCCCGCGCGCTGCCGCCGCCGCCGAACACCACGCGCAGCGTCAGGCTT GCCATGGTGGATCCCAGCACCTGGGCCACCACGTACGATGGCACCTGCACCCCCACACAC ACACATTGATCACCACAAATGAGTTATTGGCAGTAAATTTAACCGAAACATAATCCGATC CATCGTTTGCTCCACGGCTGATAAGCCCTGCTTCCACGGGAAGCATCCTTACGTGGCGAA GGCGACGGTAACGGCGGGGTTGAGGTGGGTGCCGGAGATGTGGCCGACGGAGTAGACCAG CACCGTGACGACGAGCC



consensusID : consensus_10627#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 722
fasta sequence
                              [CCGGCATCCTCGAAGAACTGGACCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAATGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCATCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAAGTTGAAGGGAGAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCATGAGCCATGGAAGAAGGGCAAGACAGCAAGGAGGTGAAGTGTGAGAATTCATAGGATGGAAGCAACACCAGCAGAAGATGCCAAGGCAACGACATGATCTCCGTCCAATTCATGCAGAAGATTCTTACGGAAATTCTGGGGACATATTTCATGATATTTGCCGGGTGCGGCGCGGTGGTGGTGAACCTGAGCACCGGCGGCGCGGTGATGTTCCCGGGGATCTGCGTCGTGTGGGGGCTCGTCGTCACGGTGCTGGTCTACTCCGTCGGCCACATCTCCGGCACCCACCTCAACCCCGCCGTTACCGTCGCCTTCGCCACGTAAGGATGCTTCCCGTGGAAGCAAGTGCCATCGTACGTGGTGGCCCACGTGCTGGGATCCACCATGGCAAGCCTGACGCTGCGCGTGGTGTTCAGCGGCGGCGGCAGCGCGCG]

[+] EMBL CB652178             [CCGGCATCCTCGAAGAACTGGACCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAATGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCATCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAAGTTGAAGGGAGAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCATGAGCCATGGAAGAAGGGCAAGACAGCAAGGAGGTGAAGTGTGAGAATTCATAGGATGGAAGCAACACCAGCAGAAGATGCCAAGGCAACGACATGATCTCCGTCCAATTCATGCAGAAGATTCTTACGGAAATTCTGGGGACATATTTCATGATATTTGCCGGGTGCGGCGCGGTGGTGGTGAACCTGAGCACCGGCGGCGCGGTGATGTTCCCGGGGATCTGCGTCGTGTGGGGGCTCGTCGTCACGGTGCTGGTCTACTCCGTCGGCCACATCTCCGGCACCCACCTCAACCCCGCCGTTACCGTCGCCTTCGCCACGTAAGGATGCTTCCCGTGGAAGCAAGTGCCATCGTACGTGGTGGCCCACGTGCTGGGATCCACCATGGCAAGCCTGACGCTGCGCGTGGTGTTCAGCGGCGGCGGCAGCGCGCG]


>consensus_10627#2 CCGGCATCCTCGAAGAACTGGACCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGAT GCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAATGTACTCTTGTGTTTCTTTCGG AAGTAAGAGTGGAAATGCTTCATCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATA GTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTG TAAGTTGAAGGGAGAGAGATGGCTGGGAGAGAGGATGGAGCAGCAGCATGAGCCATGGAA GAAGGGCAAGACAGCAAGGAGGTGAAGTGTGAGAATTCATAGGATGGAAGCAACACCAGC AGAAGATGCCAAGGCAACGACATGATCTCCGTCCAATTCATGCAGAAGATTCTTACGGAA ATTCTGGGGACATATTTCATGATATTTGCCGGGTGCGGCGCGGTGGTGGTGAACCTGAGC ACCGGCGGCGCGGTGATGTTCCCGGGGATCTGCGTCGTGTGGGGGCTCGTCGTCACGGTG CTGGTCTACTCCGTCGGCCACATCTCCGGCACCCACCTCAACCCCGCCGTTACCGTCGCC TTCGCCACGTAAGGATGCTTCCCGTGGAAGCAAGTGCCATCGTACGTGGTGGCCCACGTG CTGGGATCCACCATGGCAAGCCTGACGCTGCGCGTGGTGTTCAGCGGCGGCGGCAGCGCG CG



consensusID : consensus_10627#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [AATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCAAGCGCAAAGAACTGGTCTGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGACTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCCTGTGTTTCTTTCGGGAGTAGGAGAGAAAATGCTTTAGCAACTCGCAACATGGGAGCCGAGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGGCATGTTTTTCCTGAGCTGTTGCGGAGGAGTAAACTGTAGGTTGAAGGAGTTGAGAAGATAGTGGAGAAGTGATAGATCGTGCATGCACGGATAACAAGAAGCAACAGATCGATCGAGATGACTTTGTGGATCAGAATGCAAGACTTTTAGAGCCGTCCCTAGCTTAGAAATCTTGCAGCATTTAATTTCGTTCTTTACTTAAGAGAGATGACAAAAATGCATGCTCGAATGTAAGGGATATGTGTTTGTGTGTTTGTTTTTGTTAAATTTTATACTTGGAGAATTGAGGTAGTGATTGATCTAGCTATAGTGGGTAAAGGCTTGTCGAAAAAGTTGGTCGTGTCTGTACAATGGGGTGTGGCATCCAGATCATGCCTAAAGGAAGGTTATGTGCCTTTTCGCACCTTACCAAATGTCACTTTTGGATGTGGTTATGTGAAAAAAAAAAAAAA]

[-] EMBL CA759818             [AATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCAAGCGCAAAGAACTGGTCTGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGACTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCCTGTGTTTCTTTCGGGAGTAGGAGAGAAAATGCTTTAGCAACTCGCAACATGGGAGCCGAGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGGCATGTTTTTCCTGAGCTGTTGCGGAGGAGTAAACTGTAGGTTGAAGGAGTTGAGAAGATAGTGGAGAAGTGATAGATCGTGCATGCACGGATAACAAGAAGCAACAGATCGATCGAGATGACTTTGTGGATCAGAATGCAAGACTTTTAGAGCCGTCCCTAGCTTAGAAATCTTGCAGCATTTAATTTCGTTCTTTACTTAAGAGAGATGACAAAAATGCATGCTCGAATGTAAGGGATATGTGTTTGTGTGTTTGTTTTTGTTAAATTTTATACTTGGAGAATTGAGGTAGTGATTGATCTAGCTATAGTGGGTAAAGGCTTGTCGAAAAAGTTGGTCGTGTCTGTACAATGGGGTGTGGCATCCAGATCATGCCTAAAGGAAGGTTATGTGCCTTTTCGCACCTTACCAAATGTCACTTTTGGATGTGGTTATGTGAAAAAAAAAAAAAA]


>consensus_10627#3 AATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCAAGCGCAAAGAACTGGT CTGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGACTGACACCACAGGGGAC GGCACCTCCATGCCAGTGTACTCCTGTGTTTCTTTCGGGAGTAGGAGAGAAAATGCTTTA GCAACTCGCAACATGGGAGCCGAGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTG GGCATGTTTTTCCTGAGCTGTTGCGGAGGAGTAAACTGTAGGTTGAAGGAGTTGAGAAGA TAGTGGAGAAGTGATAGATCGTGCATGCACGGATAACAAGAAGCAACAGATCGATCGAGA TGACTTTGTGGATCAGAATGCAAGACTTTTAGAGCCGTCCCTAGCTTAGAAATCTTGCAG CATTTAATTTCGTTCTTTACTTAAGAGAGATGACAAAAATGCATGCTCGAATGTAAGGGA TATGTGTTTGTGTGTTTGTTTTTGTTAAATTTTATACTTGGAGAATTGAGGTAGTGATTG ATCTAGCTATAGTGGGTAAAGGCTTGTCGAAAAAGTTGGTCGTGTCTGTACAATGGGGTG TGGCATCCAGATCATGCCTAAAGGAAGGTTATGTGCCTTTTCGCACCTTACCAAATGTCA CTTTTGGATGTGGTTATGTGAAAAAAAAAAAAAA



consensusID : consensus_10627#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [ACTCTGANCCTTCTTCATCCAGTATGCATCACCTTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCAGTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCACCCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCTGGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCAGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGGTATGTTAGTTTCTCTCTGTATGTGTTCAGCAATCAGCACACATTTGTTAATCTTGACTTGTGGTGTTCGAGAAACCACCCCTGATTTCTTAACATTTGGTACAAGCCAATTAATTAAAAACATATTATAAAAAAAAAAAAAAAAAA]

[+] EMBL AU100708             [ACTCTGANCCTTCTTCATCCAGTATGCATCACCTTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCAGTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCACCCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCTGGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCCGAGTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAGTAAGAGTGGAAATGCTTCAGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAGGTTGAAGGTATGTTAGTTTCTCTCTGTATGTGTTCAGCAATCAGCACACATTTGTTAATCTTGACTTGTGGTGTTCGAGAAACCACCCCTGATTTCTTAACATTTGGTACAAGCCAATTAATTAAAAACATATTATAAAAAAAAAAAAAAAAAA]


>consensus_10627#4 ACTCTGANCCTTCTTCATCCAGTATGCATCACCTTCAGCACCAATTTTGCCTACGACGGC ACAGCATGTGACACCATCTTCAGTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGT CTCAGCTGGATCGTCGGTTCACCCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAG ACGGATAGTTGAAGAAGCTTCTGGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGC AGAAAATGTTGCTGCAAGAGCTGCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCG GCATGCGCGAAGAACTGGTCCGATGAAGCTCACTCCTGGGGCCAAGCATATCCTGATGCC GAGTGACACCACAGGGGACGGCACCTCCATGCCAGTGTACTCTTGTGTTTCTTTCGGAAG TAAGAGTGGAAATGCTTCAGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTC CAAATAATGCTTAAACTTGGACATGTTTTTCCTGAGCTGTTGAGGAGGAGTAAGCTGTAG GTTGAAGGTATGTTAGTTTCTCTCTGTATGTGTTCAGCAATCAGCACACATTTGTTAATC TTGACTTGTGGTGTTCGAGAAACCACCCCTGATTTCTTAACATTTGGTACAAGCCAATTA ATTAAAAACATATTATAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10627#0      TCCTCCGATTCGGGCGGCGGCGGGAACGACGATGACGACGACGACGAGGCGCTCTGCGCG 60
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ATCATGCGGCGAGCTAGGGAGAAGAAGCGGAAGCGGAGGCTGCAGGAGGAGGCGGCGGGG 120
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GCTGCTTCTGCTCCGGTGGCGGCGGCGGCGGCGGCGGCGGAGACGCGTGATTCCGAGGGA 180
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      AACTTCACCAGAAAGGAAGCACATGACAAGACAAATTTGCCTGGTGGATTGGATACTCCT 240
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CAAGCGTCAAGGAGACCTGATGGTGTACACCATGCAAGAACAGACGAGGAAAGGTCTCCA 300
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GACTCAAAGAGAAGGAAGAAGGTAAAGATCACTAACTTAGATAAGAACAACAACAAGAAG 360
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ATTGATAAGAAAAGGTACAGCGAGAGTAAAAGGGCTACCAATAAGGTGGGGAAACAGCAT 420
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GACCTGAAGAAAATGCTCCCTTTGCATAGTATTCTGAAGAAATACACAAAGCACACATCC 480
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GTCAAAATGGTCAAGGAGAAACATGGCGACCCAAAAGGCACAGAAGTCATTGAAGTCTGC 540
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CGCAAATCAGTGAAGCGTGTAAAATTCTCAGAAGTTAATGATGTGCTTGGTATTAACAAG 600
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CAAAATATCTGCAAGCTGTTCTCGGATGCTTTGGCGTCATCGTCGTCATCATCCACGGAC 660
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ATGTCCAGTGAAGGGGACAAGCACATAGCTGCAGAAAGCTGTAGTTCTCATATGCCGGAG 720
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ACAGCAACTAAAGAAGCAAGCAAGAGTACAGATCATGAGGATTCTCTTGAGCTCACCAGC 780
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ACACAGTTGTCCTCCCATTTGTTTGATCTGAATGAGGCACTGCCAGAATCTACTGATTTG 840
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      AACTACCCATATGTGTCAAATCCAGAGGAGCCAAATCATGAGCCTAGACAGCATGAGCCT 900
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      TTAGACTCTGATGTGCAAGTTATTGACGAAGGAGGACAAAACCAGCAGGATCTGTCTTTG 960
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GATTCACATGGACTTCAATGTCAGTCCGTTCCTGAGTCTGGGTTAGAAAGAGCTAGAAGT 1020
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      TCAATATCGCCAGGCACATTTTTGCACGGTGAGTTCATGGAAGTGTCTGACACATTTTTT 1080
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GTTGGTTCTTCACGGAAGTTGACAGAACTTGCTGAGTCTCATGGTGATTGTAGTAGTGGT 1140
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      TCGGTTAAAGATGCTATGACAAAGGGGAAGTCACCTTGTGCATTGCCCAATCATACAGTT 1200
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CAGGACTCATTTCAGCAGCACCAGAGGTATTATGCCTTCAATCTGAATCTTGGAGGCAGT 1260
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CAGCCCTCCAATGAAGGGGAAGTTCCTCCCCAAGACTGTAATGCATCTGCCGGAGCGGCT 1320
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      TCAAGTTCTCATGCTGAAATGGGTGTGCAGCAGGGGTGTAGGCCTGCTCCAGGACAAACT 1380
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GTGCGTCTAATGGGCAAAGATCTTGCAGTATCTACAACCAGAGGAGAGTATGTGTCTGGG 1440
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ACACATTCCTATACTGAAGACCATCCCACAAAGTTGTTCTTGGAATTGCCGCGACAAGGA 1500
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CGGCCTTATCTCTCTTTACAAGCTCAAAGTGTGCCCAATGTTTCAGCAAATTCTGCAAGC 1560
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CCAAGTCAATCACATATCAGGTACACTGCCCCACAGAATTTGAGCCACTCATTCCCCATG 1620
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GCCAATGCATTATCTGGAGATCGATTGCAATACGACGATCGGTTCAGCTACTTGTCAGGC 1680
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      TCACAGCACCATGGAAATGTTCTGCTGGGGAGTCCATCACTTACAAGTCATGGCAGTGCA 1740
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GCGCTCCGTCAGAATTTGCCGTATGTTTGGAGCCGTTACTCTGATCCTTCTTCATCCAGT 1800
consensus_10627#4      -------------------------------------ACTCTGANCCTTCTTCATCCAGT 23
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      ACTGCATCACCCTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCA 1860
consensus_10627#4      A-TGCATCACCTTCAGCACCAATTTTGCCTACGACGGCACAGCATGTGACACCATCTTCA 82
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      GTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCAC 1920
consensus_10627#4      GTTTATCATGCTAATTTGCCTCGGTCATATGGTGTGGTCTCAGCTGGATCGTCGGTTCAC 142
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ------------------------------------------------------------
                                                                                   

consensus_10627#0      CCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCT 1980
consensus_10627#4      CCCCACAACTCTCCAAGCTTTACATTCACTCGTCCAAGACGGATAGTTGAAGAAGCTTCT 202
consensus_10627#3      ------------------------------------------------------------
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      ---------------------------------------TTTTTTTTTTGAAAAAACATT 21
                                                                                   

consensus_10627#0      GGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCT 2040
consensus_10627#4      GGCAGCAGAAGAGATGCAGCATGTCCATCTAGAAATGCAGAAAATGTTGCTGCAAGAGCT 262
consensus_10627#3      ---------------------------------AATGCAGAAAATGTTGCTGCAAGAGCT 27
consensus_10627#2      ------------------------------------------------------------
consensus_10627#1      AGCATCACGGTGATTGGACTGTTGCTGCAAATTCGAG-AGACAGAACGGCTTCAATTCTG 80
                                                                                   

consensus_10627#0      GCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCG 2100
consensus_10627#4      GCCATTCCTGAAATGCCTAGCTCTTCCTCTGGTGGCCGGCATGCGCGAAGAACTGGTCCG 322
consensus_10627#3      GCCATTCCTGAAATGC------------------------AAGCGCAAAGAACTGGTCTG 63
consensus_10627#2      -----------------------------------CCGGCATCCTCGAAGAACTGGACCG 25
consensus_10627#1      TCTATATCTATATCATTAA---CTCCTACGCGAGCTCCTCCTGAGGAAGGAGCCGGACT- 136
                                                                      * ** * ** *  

consensus_10627#0      ATGAAGCTCACTCCTGGGGCCAAGC--ATATCCTGATGCCGAGTGACACCACAGGGGACG 2158
consensus_10627#4      ATGAAGCTCACTCCTGGGGCCAAGC--ATATCCTGATGCCGAGTGACACCACAGGGGACG 380
consensus_10627#3      ATGAAGCTCACTCCTGGGGCCAAGC--ATATCCTGATGCCGACTGACACCACAGGGGACG 121
consensus_10627#2      ATGAAGCTCACTCCTGGGGCCAAGC--ATATCCTGATGCCGAGTGACACCACAGGGGACG 83
consensus_10627#1      -TGGCGATCACACGCAGCGTCTTGTCGGTGAAGCGGAGCAGGTTGTAGGCCCACGCGCCG 195
                        **  * **** *   * * *  *    *     *  ** *  **    * ** * * **

consensus_10627#0      -GCACCTCCATGCCAGTGTACTCTTGTGTTT-CTTTCGGAAGTAAGAGTGGAAATGCTTC 2216
consensus_10627#4      -GCACCTCCATGCCAGTGTACTCTTGTGTTT-CTTTCGGAAGTAAGAGTGGAAATGCTTC 438
consensus_10627#3      -GCACCTCCATGCCAGTGTACTCCTGTGTTT-CTTTCGGGAGTAGGAGAGAAAATGCTTT 179
consensus_10627#2      -GCACCTCCATGCCAATGTACTCTTGTGTTT-CTTTCGGAAGTAAGAGTGGAAATGCTTC 141
consensus_10627#1      CACACCGCCCCGCTCACCGGCGCCGCCACGTACACCCACACACCGCCGTACCTCCCCGCC 255
                         **** **  **       * *       * *   *          *        *   

consensus_10627#0      AGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAAT--GCTTAAAC 2274
consensus_10627#4      AGCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAAT--GCTTAAAC 496
consensus_10627#3      AGCAACTCGCAACATGGGAGCCGAGCTGTACAAGTTATAGTCCAAATAAT--GCTTAAAC 237
consensus_10627#2      ATCAACTCGCAACATGGGAGCTGGGCTGTACAAGTTATAGTCCAAATAAT--GCTTAAAC 199
consensus_10627#1      ACCATCGCCGGACCAAGGCTCCGAGCCGGGTTCATCGACGCCCCCGTCACCGGCCCTGCG 315
                       * ** * *   **   **  * * ** *      *    * **   * *   **      

consensus_10627#0      TTGGACATGTTTTTCCTGAGCTGTTGAGGAGG-AGTAAGCT--GTAGGTTGAAGATGGGT 2331
consensus_10627#4      TTGGACATGTTTTTCCTGAGCTGTTGAGGAGG-AGTAAGCT--GTAGGTTGAAGGTATGT 553
consensus_10627#3      TTGGGCATGTTTTTCCTGAGCTGTTGCGGAGG-AGTAAACT--GTAGGTTGAAGG--AGT 292
consensus_10627#2      TTGGACATGTTTTTCCTGAGCTGTTGAGGAGG-AGTAAGCT--GTAAGTTGAAGG-GAGA 255
consensus_10627#1      AAGAGCACGTTCACCGCGA-CCGTCGCACCGACAGCGAGCCCAGCCAATTCACCGATTGC 374
                         *  ** ***   *  ** * ** *    *  **  * *   *    ** *      * 

consensus_10627#0      TT-CGTCTTTGCGCACGGCTGCCTGCATCAACACTCATGTAGAGTAGGTG-GTCAATCCA 2389
consensus_10627#4      TAGTTTCTCTCTGTATGTGTTCAGCAATCAGCACACATTT-----------GTTAATCTT 602
consensus_10627#3      TGAGAAGATAGTGGAGAAGTGATAGATCGTGCATGCACGGATAACAAGAA-GCAACAGAT 351
consensus_10627#2      GAGATGGCTGGGAGAGAGGATGGAGCAGCAGCATGAGCCATGGAAGAAGG-GCAAGACAG 314
consensus_10627#1      TCTGTTGTCCGTGGCGACGCTGGAGACGACGAACATGAGGAAGAAAGAGATGACGAACTC 434
                                                       *                  *        

consensus_10627#0      AGAAGATGATGCTGCTGCTGCTGCATAGTGCTATAAAAATACCAGCACATAATGCTGCTG 2449
consensus_10627#4      GACTTGTGGTGTT-------CGAGAAACCACCCCTGATTTCTTAACAT---------TTG 646
consensus_10627#3      CGATCGAGATGACTTTG----TGGATCAGAATGCAAGACTTTTAGAGC----CGTCCCTA 403
consensus_10627#2      CAAGGAGGTGAAGTGTGAGAATTCATAGGATGGAAGCAACACCAGCAGAAGATGCCAAGG 374
consensus_10627#1      CAGCGCCGCCGCCTGCGCCATCGACCCCGCCGGCGTCGTCCCCAAGAACAAGTGCTCCCC 494
                              *                                   *                

consensus_10627#0      GCCTGGACTA-----GTCTTTCACTATCTTTG--TACTCCCAATTCTCAAACAGATAGCT 2502
consensus_10627#4      GTACAAGCCA-----ATTAATTAAAAACATAT--TATAAAAAAAAAAAAAAAAAA----- 694
consensus_10627#3      GCTTAGA--A-----ATCTTGCAGCATTTAAT--TTCGTTCTTTACTTAAGAGAGATGAC 454
consensus_10627#2      CAACGACATG-----ATCTCCGTCCAATTCA---TGCAGAAGATTCTTACGGAAATT-CT 425
consensus_10627#1      CCGCGCGCTGCCGCCGCCGCCGAACACCACGCGCAGCGTCAGGCTTGCCATGGTGGATCC 554
                                                *                                  

consensus_10627#0      TTGCAATTGAGTCAGGGAGAGAGATGG-CTGGGAGAGAGGATGGAGCAGCAGCAGGAGCC 2561
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      AAAAATGCATGCTCGAATGTAAGGGAT-ATGTGTTTGTGTGTTTGTTTTTGTTAAATTTT 513
consensus_10627#2      GGGGACATATTTCATGATATTTGCCGG-GTGCGGCGCGGTGGTGGTGAACCTGAGCACCG 484
consensus_10627#1      CAGCACCTGGGCCACCACGTACGATGGCACCTGCACCCCCACACACACACATTGATCACC 614
                                                                                   

consensus_10627#0      ATGGAAGAAGGGC-----AAGACAGCAAGGAGGTGAACGTGCTCTTCGCAGGGT--ATGT 2614
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      ATACTTGGAGAAT-----TGAGGTAGTGATTGATCTAGCTATAGTGGGTAAAGG--CTTG 566
consensus_10627#2      GCGGCGCGGTGATGTTCCCGGGGATCTGCGTCGTGTGGGGGCTCGTCGTCACGGTGCTGG 544
consensus_10627#1      ACAAATGAGTTAT--TGGCAGTAAATTTAACCGAAACATAATCCGATCCATCGTTTGCTC 672
                                                                                   

consensus_10627#0      GTTGAAGTAAATCATAAAATTTCACAGTTAACTACGTGCTGTTGATGCCGCATTAGTAGT 2674
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      TCGAAAAAGTTGGTCGTGTCTGTACAATGGGGTGTGGCATCCAGATCATGCCTAAAGGAA 626
consensus_10627#2      TCTACTCCGTCGGCCACATCTCCGGCACCCACCTCA--ACCCCGCCGTTACCGTCGCCTT 602
consensus_10627#1      CACGGCTGATAAGCCCTGCTTCCACGGGAAGCATCCTTACGTGGCGAAGGCGACGGTAAC 732
                                                                                   

consensus_10627#0      AGTTGTTCGGTATTCTTTTTCGTTTATGCTTATACTTATCAGCCACAGTTTGAATTTTTA 2734
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      GGTTATGTGCCTTTTCGCACCTTACCAAATGTCACTTTTGGATGTGGTTATGTGAAAAAA 686
consensus_10627#2      CGCCACGTAAGGATGCTTCCCGTGGAAGCAAGTGCCATCGTACGTGGTGGCCCACGTGCT 662
consensus_10627#1      GGCGGGGTTGAGGTGGGTGCCGGAGATGTGGCCGACGGAGTAGACCAGCACCGTGACGAC 792
                                                                                   

consensus_10627#0      AAATTAAATTTGAAAT-------------------------------------------- 2750
consensus_10627#4      ------------------------------------------------------------
consensus_10627#3      AAAAAAAA---------------------------------------------------- 694
consensus_10627#2      GGGATCCACCATGGCAAGCCTGACGCTGCGCGTGGTGTTCAGCGGCGGCGGCAGCGCGCG 722
consensus_10627#1      GAGCC------------------------------------------------------- 797
                                                                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)