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Oryza sativa
cluster # 10642 cluster # 10642       Sequences # 7       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10642#0 length = 1254 sequences # 3  
consensus_10642#1 length = 682 sequences # 2  
consensus_10642#2 length = 373 sequences # 1  
consensus_10642#3 length = 307 sequences # 1  

consensusID : consensus_10642#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1254
fasta sequence
                              [CCTCCTCCCTTCCTCTCTTCTTTCCTCGCCGACGACGCGATTCCCCACCGGCGTACGGCGGCGGCGGCGGCGAGGGATTTCGCCGGCCAGCTAGCCCCATCCTCAACAAAATCGAGGGGTCGGTTGCTCTCCCGGTGGAAGAGCCCCATGGCCTCCGCCACCGCCCCGCAGCCTGTGTCCTCTCCATCCGCCGCAGCCGGCGCCGCGTCGAACAACCCCCACAAGCGCAAGAAGCCGGCGGCG-AGGGGGAAGGGGAAGGGCAA-GGGAAAGGGCCGCCT-CGCCAAGACGCCCAGGCGCTCCGATGACCCCGGCGACCTCCCCCGCCGCCGCAGCAAGCCCAGCGACAGGTTCCTCAAGCTGCTCCGCAAGCGCGCCCGCGACTACAACTCCGACGACTCCGACGACGAGGAGCGCCTCTCGGATGAGGACGAGGAGGAGGAGGGGGCTTCCGGCTCCGGTGACGACGAGGCCGCCGGCGCGGTGACCAGGTTCGAGCAGGGGTGCCGCGCGTTCCGCGTCGCCTTCACGAAGATCATGGCCAAGAAGCTCCCCGACGACCCACTGGGTCCAATTCTTTCGGCGCACAAGAAGCTGGTCGCCGCCAAGTTGGCCGAGGACGCAGAAGAACACAAGCCCAAGGGAGAAGGCCGCAGGGAAAAGCGCATGGCTGCAGAGAAGGGCCATGTCATTCCCACAAATCATTTAGATAGTAAAGAGAAGGAGCTCATCAAAATCGCAACCCAAGGGGTCGTCAGGTTGTTCAACTCGGTAAGCAAGGCGCAGAATTGTCGGAAAGGTTTGAACCCATCAAGGAGTAAAGACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGAACAATAGCAAAGACGAAGACGAACCTGGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCATTGTTTCATGCATTGATGAATGTGATGGCTAATGCACGGCACGGG]

[+] EMBL AK073284             [CCTCCTCCCTTCCTCTCTTCTTTCCTCGCCGACGACGCGATTCCCCACCGGCGTACGGCGGCGGCGGCGGCGAGGGATTTCGCCGGCCAGCTAGCCCCATCCTCAACAAAATCGAGGGGTCGGTTGCTCTCCCGGTGGAAGAGCCCCATGGCCTCCGCCACCGCCCCGCAGCCTGTGTCCTCTCCATCCGCCGCAGCCGGCGCCGCGTCGAACAACCCCCACAAGCGCAAGAAGCCGGCGGCG AGGGGGAAGGGGAAGGGCAA GGGAAAGGGCCGCCT CGCCAAGACGCCCAGGCGCTCCGATGACCCCGGCGACCTCCCCCGCCGCCGCAGCAAGCCCAGCGACAGGTTCCTCAAGCTGCTCCGCAAGCGCGCCCGCGACTACAACTCCGACGACTCCGACGACGAGGAGCGCCTCTCGGATGAGGACGAGGAGGAGGAGGGGGCTTCCGGCTCCGGTGACGACGAGGCCGCCGGCGCGGTGACCAGGTTCGAGCAGGGGTGCCGCGCGTTCCGCGTCGCCTTCACGAAGATCATGGCCAAGAAGCTCCCCGACGACCCACTGGGTCCAATTCTTTCGGCGCACAAGAAGCTGGTCGCCGCCAAGTTGGCCGAGGACGCAGAAGAACACAAGCCCAAGGGAGAAGGCCGCAGGGAAAAGCGCATGGCTGCAGAGAAGGGCCATGTCATTCCCACAAATCATTTAGATAGTAAAGAGAAGGAGCTCATCAAAATCGCAACCCAAGGGGTCGTCAGGTTGTTCAACTCGGTAAGCAAGGCGCAGAATTGTCGGAAAGGTTTGAACCCATCAAGGAGTAAAGACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGAACAATAGCAAAGACGAAGACGAACCTGGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCATTGTTTCATGCATTGATGAATGTGATGGCTAATGCACGGCACGGG]
[+] EMBL AU062471             [                   tatnCCTCGCCGACGACGCGATTCCCCACCGGCGTACGGCGGCGGCGGCGGCGAGGGATTTCGCCGTCCAGCTAGCCCCATCCTCAACAAAATCGAGGGGTCGNTTGCTCTCCCGGTGGAAGAGCCCCATGGCCTCCGNCACCGTCCCGCAGCCTGTGTCCTCTCCATCCGNCGAAGACGNCGCCGCGTCGAACAACCCCCACAAGCGCAAGAAGCCGNCGGCGAAGGNGGAAGGGGAAGGGCAAGGGGAAAGGGCCGCCTNGGCCAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB000693             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 gAGAACACAAGCCCAAGGGAGAAGGCCGCAGGGAAAAGCGCATGGCTGCAGAGAAGGGCCATGTCATTCCCACAAATCATTTAGATAGTAAAGAGAAGGAGCTCATCAAAATCGCAACCCAAGGGGTCGTCAGGTTGTTCAACTCGGTAAGCAAGGCGCAGAATTGTCGGAAAGGTTTGAACCCATCAAGGAGTAAAGACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGAACAATAGCAAAGACGAAGACGAACCTGGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGA                                                                                                                                                                                                 ]


>consensus_10642#0 CCTCCTCCCTTCCTCTCTTCTTTCCTCGCCGACGACGCGATTCCCCACCGGCGTACGGCG GCGGCGGCGGCGAGGGATTTCGCCGGCCAGCTAGCCCCATCCTCAACAAAATCGAGGGGT CGGTTGCTCTCCCGGTGGAAGAGCCCCATGGCCTCCGCCACCGCCCCGCAGCCTGTGTCC TCTCCATCCGCCGCAGCCGGCGCCGCGTCGAACAACCCCCACAAGCGCAAGAAGCCGGCG GCGAGGGGGAAGGGGAAGGGCAAGGGAAAGGGCCGCCTCGCCAAGACGCCCAGGCGCTCC GATGACCCCGGCGACCTCCCCCGCCGCCGCAGCAAGCCCAGCGACAGGTTCCTCAAGCTG CTCCGCAAGCGCGCCCGCGACTACAACTCCGACGACTCCGACGACGAGGAGCGCCTCTCG GATGAGGACGAGGAGGAGGAGGGGGCTTCCGGCTCCGGTGACGACGAGGCCGCCGGCGCG GTGACCAGGTTCGAGCAGGGGTGCCGCGCGTTCCGCGTCGCCTTCACGAAGATCATGGCC AAGAAGCTCCCCGACGACCCACTGGGTCCAATTCTTTCGGCGCACAAGAAGCTGGTCGCC GCCAAGTTGGCCGAGGACGCAGAAGAACACAAGCCCAAGGGAGAAGGCCGCAGGGAAAAG CGCATGGCTGCAGAGAAGGGCCATGTCATTCCCACAAATCATTTAGATAGTAAAGAGAAG GAGCTCATCAAAATCGCAACCCAAGGGGTCGTCAGGTTGTTCAACTCGGTAAGCAAGGCG CAGAATTGTCGGAAAGGTTTGAACCCATCAAGGAGTAAAGACGCCAAAGTGTTGGCAAAA GAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGC AAGGCATCTTCCAACTTTTCTAAGAACAATAGCAAAGACGAAGACGAACCTGGGTGGGCA CCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACC TCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAG GCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAA GTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTT TTCTTATCATTGTTTCATGCATTGATGAATGTGATGGCTAATGCACGGCACGGG



consensusID : consensus_10642#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 682
fasta sequence
                              [TCTTCAAACACATCTATTTACAGTTGGAGGGATTTCATATGGAGGGAGTGTTCAACAATGAGTAAATCTGACATCATTTAAANAAGCACCCGTATCCTCAGCATTAGCATTAAAGAATATACGTGTTAAGAATATACAAAGTTGGACTGTGTTTCTGTATGTGTACCTGTGATTCATCAGATATATAATAAACTATCTACTGTTTCTCATGCCATAAGTTAACTAAATCAGATGTAAAATGATTTAACCTGTGACAAGTTGGCTGCTCTTGTGCGCCATATCTGAATTTCATTTNATTTCGGAACATATTTTATACATATTTTTATGTATTTGGAACTTAAGAAGCTCTTGGATATTTCTCACACTTGATGTGCTTCAGAACAATAGCAAAGACGAAGACGAAACCTGGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGC---TTTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCATTGTTTCATGCAAAAAA]

[+] EMBL AU101166             [TCTTCAAACACATCTATTTACAGTTGGAGGGATTTCATATGGAGGGAGTGTTCAACAATGAGTAAATCTGACATCATTTAAANAAGCACCCGTATCCTCAGCATTAGCATTAAAGAATATACGTGTTAAGAATATACAAAGTTGGACTGTGTTTCTGTATGTGTACCTGTGATTCATCAGATATATAATAAACTATCTACTGTTTCTCATGCCATAAGTTAACTAAATCAGATGTAAAATGATTTAACCTGTGACAAGTTGGCTGCTCTTGTGCGCCATATCTGAATTTCATTTNATTTCGGAACATATTTTATACATATTTTTATGTATTTGGAACTTAAGAAGCTCTTGGATATTTCTCACACTTGATGTGCTTCAGAACAATAGCAAAGACGAAGACGAAACCTGGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGC   TTTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCATTGTTTCATGCAAAAA ]
[+] EMBL BI799976             [                                                                                                                                                                                                                                                                                                                                                                                                                       GGGTGGGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATATGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTTTTGAAGTCGTGTTCTTGTTATGGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCACTGTTTCATGCAAAAAA]


>consensus_10642#1 TCTTCAAACACATCTATTTACAGTTGGAGGGATTTCATATGGAGGGAGTGTTCAACAATG AGTAAATCTGACATCATTTAAANAAGCACCCGTATCCTCAGCATTAGCATTAAAGAATAT ACGTGTTAAGAATATACAAAGTTGGACTGTGTTTCTGTATGTGTACCTGTGATTCATCAG ATATATAATAAACTATCTACTGTTTCTCATGCCATAAGTTAACTAAATCAGATGTAAAAT GATTTAACCTGTGACAAGTTGGCTGCTCTTGTGCGCCATATCTGAATTTCATTTNATTTC GGAACATATTTTATACATATTTTTATGTATTTGGAACTTAAGAAGCTCTTGGATATTTCT CACACTTGATGTGCTTCAGAACAATAGCAAAGACGAAGACGAAACCTGGGTGGGCACCCC TACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTG ATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAA TAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCG TGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCT TATCATTGTTTCATGCAAAAAA



consensusID : consensus_10642#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 373
fasta sequence
                              [GCAGGCCTTCCTCACAGAATTAAGCAAAACATCTANCCAAAGTCAAAAGGGCAAGGCATCTTCCCAACTTTTCTAAGANCAATAGCAAAGACGAAGACGAACCTGGGNGGGCNCCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCGTGTTCTTGTTATTGACNTTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCAAAAAAAAAAAA]

[+] EMBL AU092185             [GCAGGCCTTCCTCACAGAATTAAGCAAAACATCTANCCAAAGTCAAAAGGGCAAGGCATCTTCCCAACTTTTCTAAGANCAATAGCAAAGACGAAGACGAACCTGGGNGGGCNCCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAGATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCGTGTTCTTGTTATTGACNTTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTATCAAAAAAAAAAAA]


>consensus_10642#2 GCAGGCCTTCCTCACAGAATTAAGCAAAACATCTANCCAAAGTCAAAAGGGCAAGGCATC TTCCCAACTTTTCTAAGANCAATAGCAAAGACGAAGACGAACCTGGGNGGGCNCCCCTAC GCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCAGACCTCTGATG TTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGAATAGGCAATAG ATTCACCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCTTTGAAGTCGTGT TCTTGTTATTGACNTTGTAAAGCGATATTTGGTTCAAATTTGCAAGTTAAGTTTTCTTAT CAAAAAAAAAAAA



consensusID : consensus_10642#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence
                              [ACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGGTAGCTATGATAATTCTCTCTTTACTCAAAAACACTCCATTTCATTTTATAGACTTCTGTTGCTAAGTATTTGTGTTGTATCTTCAAATTCAAATTAGTTGTTCTCAGAGGCATATCTGGTGGAACTGTTGTNCAAATTAGTTATGCNAATTTTGATGCAATTACAGCCTCAATAAATCCAAACGGGACACTGCAATACAAGT]

[+] EMBL C72695               [ACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACATCTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGGTAGCTATGATAATTCTCTCTTTACTCAAAAACACTCCATTTCATTTTATAGACTTCTGTTGCTAAGTATTTGTGTTGTATCTTCAAATTCAAATTAGTTGTTCTCAGAGGCATATCTGGTGGAACTGTTGTNCAAATTAGTTATGCNAATTTTGATGCAATTACAGCCTCAATAAATCCAAACGGGACACTGCAATACAAGT]


>consensus_10642#3 ACGCCAAAGTGTTGGCAAAAGAAACAAAGCAGGCCTTCCTCACAGAATTAAGCAAAACAT CTAACCAAAGTCAAAAGGGCAAGGCATCTTCCAACTTTTCTAAGGTAGCTATGATAATTC TCTCTTTACTCAAAAACACTCCATTTCATTTTATAGACTTCTGTTGCTAAGTATTTGTGT TGTATCTTCAAATTCAAATTAGTTGTTCTCAGAGGCATATCTGGTGGAACTGTTGTNCAA ATTAGTTATGCNAATTTTGATGCAATTACAGCCTCAATAAATCCAAACGGGACACTGCAA TACAAGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10642#0      CCTCCTCCCTTCCTCTCTTCTTTCCTCGCCGACGACGCGATTCCCCACCGGCGTACGGCG 60
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GCGGCGGCGGCGAGGGATTTCGCCGGCCAGCTAGCCCCATCCTCAACAAAATCGAGGGGT 120
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      CGGTTGCTCTCCCGGTGGAAGAGCCCCATGGCCTCCGCCACCGCCCCGCAGCCTGTGTCC 180
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      TCTCCATCCGCCGCAGCCGGCGCCGCGTCGAACAACCCCCACAAGCGCAAGAAGCCGGCG 240
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GCGAGGGGGAAGGGGAAGGGCAAGGGAAAGGGCCGCCTCGCCAAGACGCCCAGGCGCTCC 300
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GATGACCCCGGCGACCTCCCCCGCCGCCGCAGCAAGCCCAGCGACAGGTTCCTCAAGCTG 360
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      CTCCGCAAGCGCGCCCGCGACTACAACTCCGACGACTCCGACGACGAGGAGCGCCTCTCG 420
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GATGAGGACGAGGAGGAGGAGGGGGCTTCCGGCTCCGGTGACGACGAGGCCGCCGGCGCG 480
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ------------------------------------------------------------
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GTGACCAGGTTCGAGCAGGGGTGCCGCGCGTTCCGCGTCGCCTTCACGAAGATCATGGCC 540
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ----------------------------------------------------------TC 2
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      AAGAAGCTCCCCGACGACCCACTGGGTCCAATTCTTTCGGCGCACAAGAAGCTGGTCGCC 600
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      TTCAAACACATCTATTTACAGTTGGAGGGATTTCATATGGAGGG-AGTGTTCAACAATGA 61
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GCCAAGTTGGCCGAGGACGCAGAAGAACACAAGCCCAAGGGAGAAGGCCGCAGGGAAAAG 660
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      GTAAATCTGACATCATTTAAANAAGCACCCGTATCCTCAGCATTAGCATTAAAGAATATA 121
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      CGCATGGCTGCAGAGAAGGGCCATGTCATTCCCACAAATCATTTAGATAGTAAAGAGAAG 720
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      CGTGTTAAGAATATACAAAGTTGGACTGTGTTTCTGTAT-GTGTACCTGTGATTCATCAG 180
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      GAGCTCATCAAAATCGCAACCCAAGGGGTCGTCAGGTTGTTCAACTCGGTAAGCAAGGCG 780
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      ATATATAATAAACTATCTACT-----GTTTCTCATGCCATA-AGTTAACTAAATCAGATG 234
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      CAGAATTGTCGGAAAGGTTTGAACCCATCAAGGAGTAAAGACGCCAAAGTGTTGGCAAAA 840
consensus_10642#2      ------------------------------------------------------------
consensus_10642#1      TAAAATGATTTAACCTGTGACAAGTTGGCTGCTCTTGTGCGCCATATCTGAATTTCATTT 294
consensus_10642#3      ----------------------------------------ACGCCAAAGTGTTGGCAAAA 20
                                                                                   

consensus_10642#0      GAAA-CAAAGCAGGCCTTCCTCACAGAATTAAGCAAA-ACATCTAACCAAAGTCAAAAGG 898
consensus_10642#2      ---------GCAGGCCTTCCTCACAGAATTAAGCAAA-ACATCTANCCAAAGTCAAAAGG 50
consensus_10642#1      NATTTCGGAACATATTTTATACATATTTTTATGTATTTGGAACTTAAGAAGCTCTT--GG 352
consensus_10642#3      GAAA-CAAAGCAGGCCTTCCTCACAGAATTAAGCAAA-ACATCTAACCAAAGTCAAAAGG 78
                                 **    **   ** *   *** * *     * **    **  **    **

consensus_10642#0      GCAAGGCATCTTCC-AACTTTTCTAAGAACAATAGCAAAGACGAAGACGAA-CCTGGGTG 956
consensus_10642#2      GCAAGGCATCTTCCCAACTTTTCTAAGANCAATAGCAAAGACGAAGACGAA-CCTGGGNG 109
consensus_10642#1      ATATTTCTCACACTTGATGTGCTTCAGAACAATAGCAAAGACGAAGACGAAACCTGGGTG 412
consensus_10642#3      GCAAGGCATCTTCC-AACTTTTCTAAG-GTAGCTATGATAATTCTCTCTTTACTCAAAAA 136
                         *   *     *   *  *   * **   *      *  *      *    *       

consensus_10642#0      GGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCA 1016
consensus_10642#2      GGCNCCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCA 169
consensus_10642#1      GGCACCCCTACGCGAGACATACATGCTTGGGTCGAAATTGAAAGATTGGGATAAAATGCA 472
consensus_10642#3      CACTCCATTTCATTTTATAGACTTCTGTTGCTAAGTATTTGTGTTGTATCTTCAAATTCA 196
                         * **  * *     * * ** *   * * *    ***       *    * **** **

consensus_10642#0      GACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGA 1076
consensus_10642#2      GACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGA 229
consensus_10642#1      GACCTCTGATGTTGTGAATGAACAAACGGAGATCCCTTTGGACGACTCTTCTGATGAGGA 532
consensus_10642#3      AATTAGTTGT-TCTCAGAGGCATATCTGGTGGAACTGTTGTNCAAAT-TAGTTATGCNAA 254
                        *    *  * *     * * * *   ** *   *  ***  * * * *  * ***   *

consensus_10642#0      ATAGGCAATAGATTCA-CCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCT 1135
consensus_10642#2      ATAGGCAATAGATTCA-CCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCT 288
consensus_10642#1      ATAGGCAATAGATTCA-CCTGAGTGAGTTGAAGCAGCATTTGGGACAATGTTCCTGTGCT 591
consensus_10642#3      TTTTGATGCAATTACAGCCTCAATAAATCCAAACGGGACACTG--CAATACAAGT----- 307
                        *  *    *  * ** *** * * * *  ** * * *    *  ****     *     

consensus_10642#0      TTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTT 1195
consensus_10642#2      TTGAAGTCGTGTTCTTGTTATTGACNTTGTAAAGCGATATTTGGTTCAAATTTGCAAGTT 348
consensus_10642#1      TTGAAGTCGTGTTCTTGTTATTGACATTGTAAAGCGATATTTGGTTCAAATTTGCAAGTT 651
consensus_10642#3      ------------------------------------------------------------
                                                                                   

consensus_10642#0      AAGTTTTCTTATCATTGTTTCATGCATTGATGAATGTGATGGCTAATGCACGGCACGGG 1254
consensus_10642#2      AAGTTTTCTTATCAAAAAAAAAAAA---------------------------------- 373
consensus_10642#1      AAGTTTTCTTATCATTGTTTCATGCAAAAAA---------------------------- 682
consensus_10642#3      -----------------------------------------------------------
                                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)