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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10645#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2615 fasta sequence
[TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG-TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT-GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT-CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCACACCTTCTTTCCTGTAATTACTCTATTGTGGAGAGTTCTCCTGATCCAATCAACCGATTAGTTGATCAGCGGGTTTCATAGATTATAAACATTATTATTTTGTTTCTGCGTTTCTTGTTTTAGAATTAATTCACCTAGCTTTGTCTGGGATTTCTGACTGATTAGAGGAGTATTTTGGTATAAGTTGTAGTATATTCCCTAGAAATGTTAGCTAGAGAGAGGAACTAACATAGTCACTAGATTGGTGATAACCCGTTTGTCCTTTACGCGCACATTAATTCTAGTGCATTGGTGTTAAAAATCAGGGTAGCCGCTCACCCACAATGGAAACGTTTCCATGTGCCGAAAGTAAGCAATCTTTTAAAGTGGTTCTGGTCGTGCCAAAATACCTTTTGACTCCGATAGTCTTCTCCAGATCTCTTCAATTAGATAGATGCTTTTACCTAGTGCCATTCGTGTTGTGAATTGTCTATTATTACCTGACTTAATAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGCTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGACAAAAAAAATGATCTTACCAACCAGGACTAAATGATTGTATTTACGGTTAATGATGGTCGTGGTGGTGCGTATGTGATAGAAAAAAAATCGAAGTACATGGAGCAGAGCCAACTAAGATTTTATTCGCAAGGGGATGGATATAAGAAGGAAACACCAGCTTTGCTGAGTGGGACATCATTTATCTTCCCAGAGACCAAGGGAGGCGAGGAATTCACGATCTTGGGATTAAGGTTATTGCTTTGCTTAGCAAGTGGTTACTTACCAGTTACCACCGATGAAATGTGGCAATAGTTGCTACGCAATAAATATTTGGGA]
[+] EMBL AK065349 [TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCACACCTTCTTTCCTGTAATTACTCTATTGTGGAGAGTTCTCCTGATCCAATCAACCGATTAGTTGATCAGCGGGTTTCATAGATTATAAACATTATTATTTTGTTTCTGCGTTTCTTGTTTTAGAATTAATTCACCTAGCTTTGTCTGGGATTTCTGACTGATTAGAGGAGTATTTTGGTATAAGTTGTAGTATATTCCCTAGAAATGTTAGCTAGAGAGAGGAACTAACATAGTCACTAGATTGGTGATAACCCGTTTGTCCTTTACGCGCACATTAATTCTAGTGCATTGGTGTTAAAAATCAGGGTAGCCGCTCACCCACAATGGAAACGTTTCCATGTGCCGAAAGTAAGCAATCTTTTAAAGTGGTTCTGGTCGTGCCAAAATACCTTTTGACTCCGATAGTCTTCTCCAGATCTCTTCAATTAGATAGATGCTTTTACCTAGTGCCATTCGTGTTGTGAATTGTCTATTATTACCTGACTTAATAAGGTAGGAGGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGCTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGACAAAAAAAATGATCTTACCAACCAGGACTAAATGATTGTATTTACGGTTAATGATGGTCGTGGTGGTGCGTATGTGATAGAAAAAAAATCGAAGTACATGGAGCAGAGCCAACTAAGATTTTATTCGCAAGGGGATGGATATAAGAAGGAAACACCAGCTTTGCTGAGTGGGACATCATTTATCTTCCCAGAGACCAAGGGAGGCGAGGAATTCACGATCTTGGGATTAAGGTTATTGCTTTGCTTAGCAAGTGGTTACTTACCAGTTACCACCGATGAAATGTGGCAATAGTTGCTACGCAATAAATATTTGGGA]
[+] EMBL CF334329 [TGTCGTCAGAGTATCGGTAACCAACCGAAAATGTTTCGTTGATGTCCGGATGAGCTCAAAATATCGGACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGGANNGGAAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATTGGGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCG ]
[+] EMBL C74049 [ GACGCTTGTTCTTATCCAAATCTCTCAGCCACCTCCTCCACCACACATTCCCTTTCATGCCTTCTTCTCTCTCCTCAAAGTCTCTCTCTTCTCAACGCCTCTACACAGTGGAGTTGCAAGCCATGGCGAGGCATCGTTGTCGGCAGTCACACGGCGGCGTCGACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTTAGGAGGAGGT ]
[+] EMBL CB665128 [ CGGCGTCTACATCGGAGCAAGGTGGCGCGCGATAGGGAGGAGGTGCTTGACCTCGCCGGCGGCCACATGGCGGCGCGTGGTTGGGAGGAGGCAATGGACCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACGTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTAT CCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAACATGTGAAACACTCTGTGATAGGCAACACCGTCCGATCTTTTGCAATAGATCGGACGTCCGATTTGTAGTAGCATCCCTAACCATCATGTATCTTTCAGATTTCATACATTTTGATTAATATATTTTTTGCTTCCATATTTACTTTCTCTCCGTGTACTTTCCAC ]
[+] EMBL CB683941 [ GAGGAGGCAATGGATCTCATCGGCAGCCACACGACGGTGGCGGGGCAAGGTGGTATGTGG TAGGGAGGAGGCGATGGACCTCATTAGCAGCCACACGACAGGGTAGACAACGCGGGATTGAGGAGGAGGTGCTGGACCTTGCTGGCGGCCACACGACGGCGGGGTGTAGACAACGCAAGATT GGGGAGGAGGTTCTGGACCTTGC ]
[+] EMBL AU029376 [ CAAGATT GGGGAGGAGGCACTGGACCTTGCTGGCGGCTACACAGCAGCGGCGGCGACNTGGCAGAGGTGCTAGATTTGGCTGTCGGTGAGGACTCAACCGGTCTTGGGCGAGGTTATNCCACATCGTGCCGCTATTCTTCTCCCGCAAACATCAGTTACTTGGTTCTAGCAGCTAGGGGTAGAAGAAGATGACGAAGGTGGGTTTATTTCATTGGAGTTTTAGTGATGTTGCAACATATTATTTTATTTGGTTGCACTTTATTGTATTAAGGTGTTTTATTTTGTTTTGATTCAGTGTTGCATTTTACTGATTCTTAGTGTTGCAACCAGACTATTTCAGATGTTGCATTTGATTGAAACAATTTTGTTCAAGCAATGAAATATTTTTCCTCGATCGATGAAACATCTGAAACATTTTTCATCGAGTGGTGCAAaaaaaaaa ]
[-] EMBL CB665129 [ GGAATGAATGTTTTAGGCCATTCGTGCATCCTTTGGGATATCAATATATATGATACCACGGAATACTCCTTGAAGTACTACATCGGTAATTTCACGTGCTTAGGAAACTTTTTTGTAGGAGCATTAGAAATACCAATACCTACAAAGTTGTTTATATTAAAGGGTTAATTGATATTCATATATCAGTTACTATTACTAAAAAAGAACTTACTAATGTACAATATATGTAAATAAGTTACTCCCAATTTGATGCAAGACCTAGATTCATCAAACATATCACCATCCCTACTAAATGCATTATGTAACATACACATGTCGTTTACTTTGACGAGTTTTTTTTTCCACATACCTATTAATTTTCACAGACCTCGCCGACGGGGCCGNTGCCCCCTCCCCCACCGCAGCTGGCGCCGCGTCTCCCCCTCCTGGTCACGCCGTCGCCGACAGAGAGGGGAGGGGAGGGGGAGGAGGAGGAGGAAGGGTAGGGGAGGACGCATCTGGAGGGAGAGGAGGAGACGCAAATGACTTAAAAAGGCGTGGAGATATCGAGGAGATAAGGGCGGGGAGGCGCACACGTGCGACCCGGCGTGTTTTTTCGGATTTGTAGTCCCAGTTGGTGCTACCAATCGGGACTAAAGTGATGATATTTAATTCCGGTTTATAATACCAATCGGGACTAAAGATCCTTGGGGCCTGACACGGCCTATCAACTTTTTGAAGCGGGCCAAAAAAAAaaaaaaaga ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||