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Oryza sativa
cluster # 10665 cluster # 10665       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10665#0 length = 1277 sequences # 4  
consensus_10665#1 length = 850 sequences # 2  
consensus_10665#2 length = 691 sequences # 1  
consensus_10665#3 length = 312 sequences # 1  

consensusID : consensus_10665#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1277
fasta sequence
                              [GATCTTGCAGCCGCCGCGCCACGCCGCGGTGGTGGCGCCGCGGCGGGCGGGGAGGCTCGCGAGGCCGGGGTGCGCGGGGGGGAGGAGGGCGGCGGTGGCGGTGGCGGCTGCCGGCGGCGCCGCCAGGGACAGGAAGCCGCCGAGGCTGGAGGGCGCGAGCGAGGAGCTGAGGGCCGCCGCGGCGCAGTGCCTCGACTGGGCCCCCGCGCGCCGCCGCGTGCGCGGCGCCTTCGCGCCTGTGCTCCCCACCCTCGACCACTGCCTGTTCAAGATGGCTCCCAAGGGAATCCAGATGGAAGAGAATTTTGAAACCAATTCAAAGGGGGTTGAGATTTTCTGGAAGAGTTGGCTGCCTAGGGAGGGCACTGCCACCAAGGCAGCACTTTTCTTC--CCATGGATATGGTGATACTTGCACTTTCTTTTTCGAAGGGATTGCGAAGAGAATTGCAGCAGCAGGATATGCAGTATATGCTATGGATTATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGCCATTAACGACATCATTTCATGGCTGGATTCGCACTGCTGAATACCATTATACATTGTCTTGTTGATC-TGCTGTGCTGTCTCAATTTAAGTAGGAAATGAATCGCATAATAAATAGGAGTCGATCTGTACGTGTTCGCTTCTTTAAGAGAGTAAAATAATGCAT]

[+] EMBL AK120982             [GATCTTGCAGCCGCCGCGCCACGCCGCGGTGGTGGCGCCGCGGCGGGCGGGGAGGCTCGCGAGGCCGGGGTGCGCGGGGGGGAGGAGGGCGGCGGTGGCGGTGGCGGCTGCCGGCGGCGCCGCCAGGGACAGGAAGCCGCCGAGGCTGGAGGGCGCGAGCGAGGAGCTGAGGGCCGCCGCGGCGCAGTGCCTCGACTGGGCCCCCGCGCGCCGCCGCGTGCGCGGCGCCTTCGCGCCTGTGCTCCCCACCCTCGACCACTGCCTGTTCAAGATGGCTCCCAAGGGAATCCAGATGGAAGAGAATTTTGAAACCAATTCAAAGGGGGTTGAGATTTTCTGGAAGAGTTGGCTGCCTAGGGAGGGCACTGCCACCAAGGCAGCACTTTTCTTC  CCATGGATATGGTGATACTTGCACTTTCTTTTTCGAAGGGATTGCGAAGAGAATTGCAGCAGCAGGATATGCAGTATATGCTATGGATTATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGCCATTAACGACATCATTTCATGGCTGGATTCGCACTGCTGAATACCATTATACATTGTCTTGTTGATC TGCTGTGCTGTCTCAATTTAAGTAGGAAATGAATCGCATAATAAATAGGAGTCGATCTGTACGTGTTCGCTTCTTTAAGAGAGTAAAATAATGCAT]
[+] EMBL CA767490             [                                                                                                                                                                                                                                                                                                                                           ATTTTCTGGAAGAGTTGGCTGCCTAGGGAGGGCACTGCCACCAAGGCAGCACTTTTCTTCTGCCATGGATATGGTGATACTTGCACTTTCTCTTTCGAAGGGATTGCGAAGAGAATTGCAGCAGCAGGATATGCAGTATATGCTATGGATTATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGACTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCA                                                                                                                                                                                                              ]
[+] EMBL D43261               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGCATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGCCATTAACGACATCATTTCATGGCTGGATTCGCACTGCTGAATACCATTATACATTGTCTTGTTGATCTTGCTGTGCTGTCTC                                                                                  ]
[+] EMBL D43246               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGNCCGGATTTCAACTGCCATTAACGCCATCATTTCATGGCTGGATTCGCACTGCTGAATACCAT                                                                                                                     ]


>consensus_10665#0 GATCTTGCAGCCGCCGCGCCACGCCGCGGTGGTGGCGCCGCGGCGGGCGGGGAGGCTCGC GAGGCCGGGGTGCGCGGGGGGGAGGAGGGCGGCGGTGGCGGTGGCGGCTGCCGGCGGCGC CGCCAGGGACAGGAAGCCGCCGAGGCTGGAGGGCGCGAGCGAGGAGCTGAGGGCCGCCGC GGCGCAGTGCCTCGACTGGGCCCCCGCGCGCCGCCGCGTGCGCGGCGCCTTCGCGCCTGT GCTCCCCACCCTCGACCACTGCCTGTTCAAGATGGCTCCCAAGGGAATCCAGATGGAAGA GAATTTTGAAACCAATTCAAAGGGGGTTGAGATTTTCTGGAAGAGTTGGCTGCCTAGGGA GGGCACTGCCACCAAGGCAGCACTTTTCTTCCCATGGATATGGTGATACTTGCACTTTCT TTTTCGAAGGGATTGCGAAGAGAATTGCAGCAGCAGGATATGCAGTATATGCTATGGATT ATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGG TGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCC CACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAAC AACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATG TTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAG CAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAA AAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTG AACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGC TGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACG AGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCT TAGAGGGTGAACCTGATGACCGGATTTCAACTGCCATTAACGACATCATTTCATGGCTGG ATTCGCACTGCTGAATACCATTATACATTGTCTTGTTGATCTGCTGTGCTGTCTCAATTT AAGTAGGAAATGAATCGCATAATAAATAGGAGTCGATCTGTACGTGTTCGCTTCTTTAAG AGAGTAAAATAATGCAT



consensusID : consensus_10665#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 850
fasta sequence
                              [ACGAGACAAGGGGATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGNCATTAACGACATCATTTCATGGCTGGATTCGCACTGCTGNATACCATTATACATTGGCTTGGTGATCTGCTGGGCTGGCTCAATTTAAGTAGGNAATGAATCGCATAATAAATAGGAGTCGATCTGGACCGNGTTCGCTTTTTTTANAGAGTAAAAAAATGCNTTAAATTTTGGGNACCAAAAAAAAAAAAAAAAGCGGGCCG]

[+] EMBL CB096345             [ACGAGACAAGGGGATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGNCATTAACGACATCATTTCATGGCTGGATTCGCACTGCTGNATACCATTATACATTGGCTTGGTGATCTGCTGGGCTGGCTCAATTTAAGTAGGNAATGAATCGCATAATAAATAGGAGTCGATCTGGACCGNGTTCGCTTTTTTTANAGAGTAAAAAAATGCNTTAAATTTTGGGNACCAAAAAAAAAAAAAAAAGCGGGCCG]
[+] EMBL D43288               [                                                                                                                                                                                                                                                                                                                                                                                            TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGNATCCCAGTTGGAGAAGATTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGCGAATTCCTGTACGAGAAAGCTAGCACAAAAGNCAAGNCTCTCAAGCTCTACGAAGATGGNTATCATTCTATCTTAGAGGGTGAAC                                                                                                                                                                                                                                 ]


>consensus_10665#1 ACGAGACAAGGGGATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGC TTTGATGGAATGGTGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAG GTCCGTGGGCTCCCACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAA GTACACCTGAAACAACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAG ATTTCAGAAGATGTTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGC CTTCTTCCAGAAGCAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGAT CCAAGTAAAAGAAAAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTG AGGACAGCAGTTGAACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATT TGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTGGTTACCGACCCCCATGTCAGC GAATTCCTGTACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGA TATCATTCTATCTTAGAGGGTGAACCTGATGACCGGATTTCAACTGNCATTAACGACATC ATTTCATGGCTGGATTCGCACTGCTGNATACCATTATACATTGGCTTGGTGATCTGCTGG GCTGGCTCAATTTAAGTAGGNAATGAATCGCATAATAAATAGGAGTCGATCTGGACCGNG TTCGCTTTTTTTANAGAGTAAAAAAATGCNTTAAATTTTGGGNACCAAAAAAAAAAAAAA AAGCGGGCCG



consensusID : consensus_10665#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 691
fasta sequence
                              [CTTCCATGGGAGGGCCAGTGGCTTTGAAAATTCCCCTTCACAACCCAAAGAATGGGGTGAGGGGCTTTTGTGGTCCCTTGTGCAAGAAGATGTTCCCCCCCCAGCGCCAGTGTTGAAGGCCTTGAGCCTATTGTCCTGCCTCTTCCAGAAACAAAGTTATTTCCCCAAAAAGATATTGGAGATTTGGCCCTTGGGGATCCCAGTAAAAGAAAAGTAGCTGAGTCCCACGCCCTTTCATATTCCCCACAAATGAGGTTGAGGGCAGCAGTTGAACTTTTGAAGGCTTCAAAGGACATAAAATCCCCGTTGGAGAAGATTTGTTCCCCCTTGCTGATTTTCCCCGGAACAACAGGCTTGGTTTCCCACCCCCCTGTCAGCGAATTCCTGTTCGAGAAAGCTAGCCCCAAAGCCCAGACTTTCCAGCTTTTCGGAGATGGATATCCTTCTATTTTAAAGGGGGAACCTGATGACCGGATTTCAACTGCCCTTAACGGCATCCTTTCCAGGCGGGATTTGCCCTGCTGAAAACCCTTATACCATGTCCTGTTGATTTGCTGGGCTGTCTCCATTTAAGTTGGAAATGAATCGCCTAATAAATAGGAGTCGATCCGGACGTGTTCGCTTCTTTTAGAGGGTAAAATAATGCCTAAATTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760086             [CTTCCATGGGAGGGCCAGTGGCTTTGAAAATTCCCCTTCACAACCCAAAGAATGGGGTGAGGGGCTTTTGTGGTCCCTTGTGCAAGAAGATGTTCCCCCCCCAGCGCCAGTGTTGAAGGCCTTGAGCCTATTGTCCTGCCTCTTCCAGAAACAAAGTTATTTCCCCAAAAAGATATTGGAGATTTGGCCCTTGGGGATCCCAGTAAAAGAAAAGTAGCTGAGTCCCACGCCCTTTCATATTCCCCACAAATGAGGTTGAGGGCAGCAGTTGAACTTTTGAAGGCTTCAAAGGACATAAAATCCCCGTTGGAGAAGATTTGTTCCCCCTTGCTGATTTTCCCCGGAACAACAGGCTTGGTTTCCCACCCCCCTGTCAGCGAATTCCTGTTCGAGAAAGCTAGCCCCAAAGCCCAGACTTTCCAGCTTTTCGGAGATGGATATCCTTCTATTTTAAAGGGGGAACCTGATGACCGGATTTCAACTGCCCTTAACGGCATCCTTTCCAGGCGGGATTTGCCCTGCTGAAAACCCTTATACCATGTCCTGTTGATTTGCTGGGCTGTCTCCATTTAAGTTGGAAATGAATCGCCTAATAAATAGGAGTCGATCCGGACGTGTTCGCTTCTTTTAGAGGGTAAAATAATGCCTAAATTTTGGGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10665#2 CTTCCATGGGAGGGCCAGTGGCTTTGAAAATTCCCCTTCACAACCCAAAGAATGGGGTGA GGGGCTTTTGTGGTCCCTTGTGCAAGAAGATGTTCCCCCCCCAGCGCCAGTGTTGAAGGC CTTGAGCCTATTGTCCTGCCTCTTCCAGAAACAAAGTTATTTCCCCAAAAAGATATTGGA GATTTGGCCCTTGGGGATCCCAGTAAAAGAAAAGTAGCTGAGTCCCACGCCCTTTCATAT TCCCCACAAATGAGGTTGAGGGCAGCAGTTGAACTTTTGAAGGCTTCAAAGGACATAAAA TCCCCGTTGGAGAAGATTTGTTCCCCCTTGCTGATTTTCCCCGGAACAACAGGCTTGGTT TCCCACCCCCCTGTCAGCGAATTCCTGTTCGAGAAAGCTAGCCCCAAAGCCCAGACTTTC CAGCTTTTCGGAGATGGATATCCTTCTATTTTAAAGGGGGAACCTGATGACCGGATTTCA ACTGCCCTTAACGGCATCCTTTCCAGGCGGGATTTGCCCTGCTGAAAACCCTTATACCAT GTCCTGTTGATTTGCTGGGCTGTCTCCATTTAAGTTGGAAATGAATCGCCTAATAAATAG GAGTCGATCCGGACGTGTTCGCTTCTTTTAGAGGGTAAAATAATGCCTAAATTTTGGGGA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10665#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 312
fasta sequence
                              [TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGCAGGCTACAAAGGNCATAGAATCCCAGTTGGAGAAGANTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTTAGTTACCGACCCCCATGTCAGCGAATTTCCNTGTACGTGAANGCTAGCACAAANGACAAGACTNTCACGCTCTACGGAGNTNGATAATCATTCTAATCATAAGAGGGTGAACCTGNTTGACCGGNCTTTCAACTNCCATTAAACGGNCATCAANTTTNATGGGNTGGGATTCG]

[+] EMBL D43279               [TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTTGCAGGCTACAAAGGNCATAGAATCCCAGTTGGAGAAGANTTGTTCCCCATTGCTGATTCTCCACGGAGCAGCAGACTTTAGTTACCGACCCCCATGTCAGCGAATTTCCNTGTACGTGAANGCTAGCACAAANGACAAGACTNTCACGCTCTACGGAGNTNGATAATCATTCTAATCATAAGAGGGTGAACCTGNTTGACCGGNCTTTCAACTNCCATTAAACGGNCATCAANTTTNATGGGNTGGGATTCG]


>consensus_10665#3 TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTGAACTTTT GCAGGCTACAAAGGNCATAGAATCCCAGTTGGAGAAGANTTGTTCCCCATTGCTGATTCT CCACGGAGCAGCAGACTTTAGTTACCGACCCCCATGTCAGCGAATTTCCNTGTACGTGAA NGCTAGCACAAANGACAAGACTNTCACGCTCTACGGAGNTNGATAATCATTCTAATCATA AGAGGGTGAACCTGNTTGACCGGNCTTTCAACTNCCATTAAACGGNCATCAANTTTNATG GGNTGGGATTCG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10665#0      GATCTTGCAGCCGCCGCGCCACGCCGCGGTGGTGGCGCCGCGGCGGGCGGGGAGGCTCGC 60
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GAGGCCGGGGTGCGCGGGGGGGAGGAGGGCGGCGGTGGCGGTGGCGGCTGCCGGCGGCGC 120
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      CGCCAGGGACAGGAAGCCGCCGAGGCTGGAGGGCGCGAGCGAGGAGCTGAGGGCCGCCGC 180
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GGCGCAGTGCCTCGACTGGGCCCCCGCGCGCCGCCGCGTGCGCGGCGCCTTCGCGCCTGT 240
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GCTCCCCACCCTCGACCACTGCCTGTTCAAGATGGCTCCCAAGGGAATCCAGATGGAAGA 300
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GAATTTTGAAACCAATTCAAAGGGGGTTGAGATTTTCTGGAAGAGTTGGCTGCCTAGGGA 360
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      GGGCACTGCCACCAAGGCAGCACTTTTCTTCCCATGGATATGGTGATACTTGCACTTTCT 420
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ------------------------------------------------------------
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TTTTCGAAGGGATTGCGAAGAGAATTGCAGCAGCAGGATATGCAGTATATGCTATGGATT 480
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      -----------------------------------------------ACGAGACAAGGGG 13
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      ATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGG 540
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      ATCCTGGTTTTGGTTTATCATATGGTCTTCATGGCTACATTGCCAGCTTTGATGGAATGG 73
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      TGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCC 600
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      TGGAACATGTCATTGAACAATACTCACGGATAAAAGGCAGGAAGGAGGTCCGTGGGCTCC 133
consensus_10665#2      ------------------------------------------------------------
                                                                                   

consensus_10665#0      CACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAAC 660
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      CACATTTTCTATTGGGACAATCAATGGGAGGTGCAGTGGCTTTGAAAGTACACCTGAAAC 193
consensus_10665#2      ------------------CTTCCATGGGAGGGCCAGTGGCTTTGAAAATTCCCCTTCA-C 41
                                                                                   

consensus_10665#0      AACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATG 720
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      AACCAAAAGAATGGGATGGAGTGCTTCTTGTTGCACCTATGTGCAAGATTTCAGAAGATG 253
consensus_10665#2      AACCCAAAGAATGGGGTGAGGGGCTTTT--GTGGTCCCTTGTGCAAGA-------AGATG 92
                                                                                   

consensus_10665#0      TTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAG 780
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      TTACACCACCAGCGCCAGTGTTGAAGGCATTGAGCATATTGTCATGCCTTCTTCCAGAAG 313
consensus_10665#2      TTCCCCCCCCAGCGCCAGTGTTGAAGGCCTTGAGCCTATTGTCCTGCCT-CTTCCAGAAA 151
                                                                                   

consensus_10665#0      CAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAA 840
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      CAAAGTTATTTCCACAAAAAGATATTGGAGATTTGGCATTTAGAGATCCAAGTAAAAGAA 373
consensus_10665#2      CAAAGTTATTTCCCCAAAAAGATATTGGAGATTTGGCCCTTGGGGATCCCAGTAAAAGAA 211
                                                                                   

consensus_10665#0      AAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTG 900
consensus_10665#3      -------TGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTG 53
consensus_10665#1      AAGTAGCTGAGTACAATGCCATTTCATATACCCAACAAATGAGGTTGAGGACAGCAGTTG 433
consensus_10665#2      AAGTAGCTGAGTCCCACGCCCTTTCATATTCCCCACAAATGAGGTTGAGGGCAGCAGTTG 271
                              ***** * * *** ******** *** **************** *********

consensus_10665#0      AACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGC 960
consensus_10665#3      AACTTTTGCAGGCTACAAAGGNCATAGAATCCCAGTTGGAGAAGANTTGTTCCCCATTGC 113
consensus_10665#1      AACTTTTGAAGGCTACAAAGGACATAGAATCCCAGTTGGAGAAGATTTGTTCCCCATTGC 493
consensus_10665#2      AACTTTTGAAGGCTTCAAAGGACATAAAATCCCCGTTGGAGAAGATTTGTTCCCCCTTGC 331
                       ******** ***** ****** **** ****** *********** ********* ****

consensus_10665#0      TGATTCTCCACGGAGCAGCAGACTT-GGTTACCGACCCCCATGTCAGCGAATT--CCTGT 1017
consensus_10665#3      TGATTCTCCACGGAGCAGCAGACTTTAGTTACCGACCCCCATGTCAGCGAATTTCCNTGT 173
consensus_10665#1      TGATTCTCCACGGAGCAGCAGACTT-GGTTACCGACCCCCATGTCAGCGAATT--CCTGT 550
consensus_10665#2      TGATTTTCCCCGGAACAACAGGCTT-GGTTTCCCACCCCCCTGTCAGCGAATT--CCTGT 388
                       ***** *** **** ** *** ***  *** ** ****** ************  * ***

consensus_10665#0      ACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATA-TCATTCT 1076
consensus_10665#3      ACGTGAANGCTAGCACAAANGACAAGACTNTCACGCTCTACGGAGNTNGATAATCATTCT 233
consensus_10665#1      ACGAGAAAGCTAGCACAAAAGACAAGACTCTCAAGCTCTACGAAGATGGATA-TCATTCT 609
consensus_10665#2      TCGAGAAAGCTAGCCCCAAAGCCCAGACTTTCCAGCTTTTCGGAGATGGATA-TCCTTCT 447
                        ** *** ****** * ** * * ***** **  *** * ** ** * **** ** ****

consensus_10665#0      ATC--TTAGAGGGTGAACCTGAT-GACCGGA-TTTCAACTGCCATTAAC--GACATCA-- 1128
consensus_10665#3      AATCATAAGAGGGTGAACCTGNTTGACCGGNCTTTCAACTNCCATTAAACGGNCATCAAN 293
consensus_10665#1      ATC--TTAGAGGGTGAACCTGAT-GACCGGA-TTTCAACTGNCATTAAC--GACATCA-- 661
consensus_10665#2      ATT--TTAAAGGGGGAACCTGAT-GACCGGA-TTTCAACTGCCCTTAAC--GGCATCC-- 499
                       *    * * **** ******* * ******  ********  * ****   * ****   

consensus_10665#0      TTTCATGGCT--GGATTCGCACTGCTGAATACCATTATACATTGTCTTGTTGATCTGCTG 1186
consensus_10665#3      TTTNATGGGNTGGGATTCG----------------------------------------- 312
consensus_10665#1      TTTCATGGCT--GGATTCGCACTGCTGNATACCATTATACATTGGCTTGGTGATCTGCTG 719
consensus_10665#2      TTTCCAGGCG--GGATTTGCCCTGCTGAAAACCCTTATACCATGTCCTGTTGATTTGCTG 557
                       ***   **    ***** *                                         

consensus_10665#0      TGCTGTCTCAATTTAAGTAGGAAATGAATCGCATAATAAATAGGAGTCGATCTGTAC-GT 1245
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      GGCTGGCTCAATTTAAGTAGGNAATGAATCGCATAATAAATAGGAGTCGATCTGGACCGN 779
consensus_10665#2      GGCTGTCTCCATTTAAGTTGGAAATGAATCGCCTAATAAATAGGAGTCGATCCGGAC-GT 616
                                                                                   

consensus_10665#0      GTTCGCTTCTTTAAGAGAGTAAAATAATGCAT---------------------------- 1277
consensus_10665#3      ------------------------------------------------------------
consensus_10665#1      GTTCGCTTTTTTTANAGAGTAAAAAAATGCNTTAAATTTTGGGNACCAAAAAAAAAAAAA 839
consensus_10665#2      GTTCGCTTCTTTTAGAGGGTAAAATAATGCCTAAATTTTGGGGAAAAAAAAAAAAAAAAA 676
                                                                                   

consensus_10665#0      ---------------
consensus_10665#3      ---------------
consensus_10665#1      AAAGCGGGCCG---- 850
consensus_10665#2      AAAAAAAAAAAAAAA 691
                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)