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Oryza sativa
cluster # 10668 cluster # 10668       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10668#0 length = 1335 sequences # 3  
consensus_10668#1 length = 797 sequences # 2  
consensus_10668#2 length = 608 sequences # 3  

consensusID : consensus_10668#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1335
fasta sequence
                              [AAATAAAGTGTTTGTGCGCGCATCTATGAGAATTGAGTGTGAGCACCTGCTGCATAAAAACCTATCAGCGATCGAGCTCTATAAATTGCGGCCTCAATCCCATGCATCGATCTACACATTCTTCCCCATCACTGAAAGAGATCCTCAGGCTAGCTAATTAAGATACACGGACGTACACATACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACAGCCATGGCGGCGTCGGCGGCTCAGCCGCATGTCCCGTTCACGGACGAGGACCTGGAGTCGGAGGAGAGCATGTGGAGCCTCTACCAGAGGTGGCGCGGCGCCGTGCACACCTCGTCGCTGGACATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTACGTCAGCGAGTTCAACAAGAAGGAGGGCATGACCTACAAGCTCGGCCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACCAAGGTGGACGCCGCTGCCATGGCTAGGGCTCCCCAGGCTGAGGAGGAGCTGGAGCTGGCCGGCGACGTGGCGGCTTCGTGGGACTGGAGACAGCACGGAGCTGTCACTCCTGCCAGGGAGCAGGGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGGATCGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTCGATGTGACCGCCAGCGAGGCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGTAATTAATCGAATTTAAATTACTTCAAATTAAGATTAATCGTTGTAGCAAAATGAGTTAGGGGAGGTGGTCTGGTTGATTTGATCCATTCCTCCCGGCTTTTCTCCAGAATTGATTTAGCATCTGACTTTTTTTCCTTTTTTTTCAATCATATCTCTTATAATTGGTTTTTCTCCTATATATAGTACATAAAAATGTGTGATAAACATGCATTTTGTCTGTCATGTGCGATAAATGCGAGTTTAATTTCTAGTGGTGTGTAATTAAGGACCATGTTGCGCAATACAAAAGCAAAAATACTATGCATATG]

[+] EMBL AK071733             [AAATAAAGTGTTTGTGCGCGCATCTATGAGAATTGAGTGTGAGCACCTGCTGCATAAAAACCTATCAGCGATCGAGCTCTATAAATTGCGGCCTCAATCCCATGCATCGATCTACACATTCTTCCCCATCACTGAAAGAGATCCTCAGGCTAGCTAATTAAGATACACGGACGTACACATACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACAGCCATGGCGGCGTCGGCGCCTCAGCCGCATGTCCCGTTCACGGACGAGGACCTGGAGTCGGAGGAGAGCATGTGGAGCCTCTACCAGAGGTGGCGCGGCGCCGTGCACACCTCGTCGCTGGACATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTACGTCAGCGAGTTCAACAAGAAGGAGGGCATGACCTACAAGCTCGGCCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACCAAGGTGGACGCCGCTGCCATGGCTAGGGCTCCCCAGGCTGAGGAGGAGCTGGAGCTGGCCGGCGACGTGGCGGCTTCGTGGGACTGGAGACAGCACGGAGCTGTCACTCCTGCCAGGGAGCAGGGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGGTCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAA GGATCGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTCGATGTGACCGCCAGCGAGGCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGTAATTAATCGAATTTAAATTACTTCAAATTAAGATTAATCGTTGTAGCAAAATGAGTTAGGGGAGGTGGTCTGGTTGATTTGATCCATTCCTCCCGGCTTTTCTCCAGAATTGATTTAGCATCTGACTTTTTTTCCTTTTTTTTCAATCATATCTCTTATAATTGGTTTTTCTCCTATATATAGTACATAAAAATGTGTGATAAACATGCATTTTGTCTGTCATGTGCGATAAATGCGAGTTTAATTTCTAGTGGTGTGTAATTAAGGACCATGTTGCGCAATACAAAAGCAAAAATACTATGCATATG]
[+] EMBL CB623218             [                                                                                                                                                  AGGCTAGCTAATTAAGATACACGGACGTACACATACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACAGCCATGGCGGCGTCGGCGGCTCAGCCGCATGTCCCGTTCACGGACGAGGACCTGGAGTCGGAGGAGAGCATGTGGAGCCTCTACCAGAGGTGGCGCGGCGCCGTGCACACCTCGTCGCTGGACATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTACGTCAGCGAGTTCAACAAGAAGGAGGGCATGACCTACAAGCTCGGCCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACCAAGGTGGACGCCGCTGCCATGGCTAGGGCTCCCCAGGCTGAGGAGGAGCTGGAGCTGGCCGGCGACGTGGCGGCTTCGTGGGACTGGAGACAGCACGGAGCTGTCACTCCTGCCAGGGAGCAGGGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGGATCGGGCCTGCAGGAGGAATACTCCTGCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB617886             [                                                                                                                                                  AGGCTAGCTAATTAAGATACACGGACGTACACATACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACAGCCATGGCGGCGTCGGCGGCTCAGCCGCATGTCCCGTTCACGGACGAGGACCTGGAGTCGGAGGAGAGCATGTGGAGCCTCTACCAGAGGTGGCGCGGCGCCGTGCACACCTCGTCGCTGGACATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTACGTCAGCGAGTTCAACAAGAAGGAGGGCATGACCTACAAGCTCGGCCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACCAAGGTGGACGCCGCTGCCATGGCTAGGGCTCCCCAGGCTGAGGAGGAGCTGGAGCTGGCCGGCGACGTGGCGGCTTCGTGGGACTGGAGACAGCACGGAGCTGTCACTCCTGCCAGGGAGCAGGGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGGATCGGGCCTGCAGGAGGAATACTCCTGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_10668#0 AAATAAAGTGTTTGTGCGCGCATCTATGAGAATTGAGTGTGAGCACCTGCTGCATAAAAA CCTATCAGCGATCGAGCTCTATAAATTGCGGCCTCAATCCCATGCATCGATCTACACATT CTTCCCCATCACTGAAAGAGATCCTCAGGCTAGCTAATTAAGATACACGGACGTACACAT ACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACAGC CATGGCGGCGTCGGCGGCTCAGCCGCATGTCCCGTTCACGGACGAGGACCTGGAGTCGGA GGAGAGCATGTGGAGCCTCTACCAGAGGTGGCGCGGCGCCGTGCACACCTCGTCGCTGGA CATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTACGT CAGCGAGTTCAACAAGAAGGAGGGCATGACCTACAAGCTCGGCCTCAACAAGTTCGCCGA CATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACCAAGGTGGACGCCGCTGCCAT GGCTAGGGCTCCCCAGGCTGAGGAGGAGCTGGAGCTGGCCGGCGACGTGGCGGCTTCGTG GGACTGGAGACAGCACGGAGCTGTCACTCCTGCCAGGGAGCAGGGTACGTGCGAGAGCTG CTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCT GGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGG CGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGG CAGCTACCCGCCATACGAGGCCAAGGGATCGGGCCTGCAGGAGGAATACTCCTGCAGTGC CCGTGGTGAAGATGGACGGCGCAGTCGATGTGACCGCCAGCGAGGCCGCTCTCAAGCGCA GCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAAAGCCTCCAGCTCTACA AGGAGGTAATTAATCGAATTTAAATTACTTCAAATTAAGATTAATCGTTGTAGCAAAATG AGTTAGGGGAGGTGGTCTGGTTGATTTGATCCATTCCTCCCGGCTTTTCTCCAGAATTGA TTTAGCATCTGACTTTTTTTCCTTTTTTTTCAATCATATCTCTTATAATTGGTTTTTCTC CTATATATAGTACATAAAAATGTGTGATAAACATGCATTTTGTCTGTCATGTGCGATAAA TGCGAGTTTAATTTCTAGTGGTGTGTAATTAAGGACCATGTTGCGCAATACAAAAGCAAA AATACTATGCATATG



consensusID : consensus_10668#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 797
fasta sequence
                              [GGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGATCGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTCGATGTGCCCGCCAGCGAGGCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGGCGTGTACAGTGGGCCGTGCGGGACGACGGTGAACCACGGCGTGTTAGTGGTGGGGTATGGCGTGACACGGGACAACATCAAGTCCTGGATCATCAAGAATTCATGGGGAAAGGAATGGGGCGATAATGGTTTCGGCCACATGAAGCGTGACGTCATAGCCAAAGAGGGCCTCTGTGGCATTGCCATGTATGGTGTGTACTCTGTCAAAAATGGTCATAAAAATTGCTCTTATCTTGCATCTCCTGCCGTTGTTGCCTCCTACTAGTATTAGAGTTCAGATCAATGCGATGATCGATCAATGTGTCATAGGGCCGAGTTCGAATAAAATATTTGCATACGTCAGTGAAGTATGCATTTGTAGTTTGTTGTGCTTGAAGAACGCAATAAATAAAAGTGGCCCTTACTTTCTTTTGT]

[-] EMBL CB623219             [GGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGATCGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTCGATGTGCCCGCCAGCGAGGCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGGCGTGTACAGTGGGCCGTGCGGGACGACGGTGAACCACGGCGTGTTAGTGGTGGGGTATGGCGTGACACGGGACAACATCAAGTCCTGGATCATCAAGAATTCATGGGGAAAGGAATGGGGCGATAATGGTTTCGGCCACATGAAGCGTGACGTCATAGCCAAAGAGGGCCTCTGTGGCATTGCCATGTATGGTGTGTACTCTGTCAAAAATGGTCATAAAAATTGCTCTTATCTTGCATCTCCTGCCGTTGTTGCCTCCTACTAGTATTAGAGTTCAGATCAATGCGATGATCGATCAATGTGTCATAGGGCCGAGTTCGAATAAAATATTTGCATACGTCAGTGAAGTATGCATTTGTAGTTTGTTGTGCTTGAAGAACGCAATAAATAAAAGTGGCCCTTACTTTCTT    ]
[-] EMBL CB617887             [                                                                                                                                                                                                                                                                                                                                                                                                 TGTACAGTGGGCCGTGCGGGAAGACGGTGAACCACGGCGTGTTAGTGGTGGGGTATGGCGTGACCCGGGACAACATCAAGTCCTGGATCATCAAGAATTCATGGGGAAAGGAATGGGGCGATAATGTTTTCGGCCACATGAAGCGTGCCGTCATATCCAAAGAGGGCCTCTGTGGCATTGCCATGTATGGTGTGTACTCTGTCAAAAATGGTCATAAAAATTGGTCTTATCTTGCATCTCCCGCCGTTGTTGCCTCCTACTAGTATTAGAGTTCAGATCAATGCGATGATCGATCAATGTGTCATAGGGCCGAGTTAGAATAAAATATTTGCATACGTCAGCGAAGTATGCATTTGTAGTTTGTTGTGCTTGAAAAACGCAATAAATAAAAGCGGCCCTTGCTTTCTCTTGT]


>consensus_10668#1 GGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGGAGGGCGCGAACGCG ATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGGACTGCTCCGGCGCC GGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCTACGCCGTGAAGCAG GGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGGATCGGGCCTGCAGGAGG AATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTCGATGTGCCCGCCAGCGAG GCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTCTCCATCGAAGCCACCCAA AGCCTCCAGCTCTACAAGGAGGGCGTGTACAGTGGGCCGTGCGGGACGACGGTGAACCAC GGCGTGTTAGTGGTGGGGTATGGCGTGACACGGGACAACATCAAGTCCTGGATCATCAAG AATTCATGGGGAAAGGAATGGGGCGATAATGGTTTCGGCCACATGAAGCGTGACGTCATA GCCAAAGAGGGCCTCTGTGGCATTGCCATGTATGGTGTGTACTCTGTCAAAAATGGTCAT AAAAATTGCTCTTATCTTGCATCTCCTGCCGTTGTTGCCTCCTACTAGTATTAGAGTTCA GATCAATGCGATGATCGATCAATGTGTCATAGGGCCGAGTTCGAATAAAATATTTGCATA CGTCAGTGAAGTATGCATTTGTAGTTTGTTGTGCTTGAAGAACGCAATAAATAAAAGTGG CCCTTACTTTCTTTTGT



consensusID : consensus_10668#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 608
fasta sequence
                              [AATAGCTAATAATTAAGAGACGATACAGGCGCTAACACACATGGAGATGAAAAATCCATTGGCAGTAGGGCTGTTGGCTCTGCTGGTGGCAGCCATGGCGGTGACGGCGGCGGCGCACGACGACGACGACGTGCCATTCACTGACGAGGACCTGGAGTCGGAGCAGAGCATGTGGAATCTGTACGATAGGTGGCGCGCCGTGTACGCCTCGTCGTCGTCGCACCTCGGCGGCGACATCGAGAGCAGGTTCGAGGCGTTCAAGGCGAACG-CAGGTATGTCAGCNAGTTCAACAAGAAGGAAGGTATGACCTACGAGCTCGGGCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCANAGTACGCCGGCGCCAAGGTTGACGCCGCCGCCGCCTTGGCTTCCGTTCCGGAGGCCGAGGAGGAGGTGGTCGGCGATGTCCCTGCCGCTTGGGACTGGAGACAGCACGGAGTTGTCACTCCTGTCAAGGATCAAGGCTCGTGCGGGAGCTGCTGGGCTTTCTCGTCGGTGGGTGCGGTGGAGAGCGCCTACNCGATCGCGACGAAAAGCTGCTCCGGCTGTCGGAGCAACAGGTGCTGGACTGC]

[+] EMBL CA756307             [AATAGCTAATAATTAAGAGACGATACAGGCGCTAACACACATGGAGATGAAAAATCCATTGGCAGTAGGGCTGTTGGCTCTGCTGGTGGCAGCCATGGCGGTGACGGCGGCGGCGCACGACGACGACGACGTGCCATTCACTGACGAGGACCTGGAGTCGGAGCAGAGCATGTGGAATCTGTACGATAGGTGGCGCGCCGTGTACGCCTCGTCGTCGTCGCACCTCGGCGGCGACATCGAGAGCAGGTTCGAGGCGTTCAAGGCGAACGCCAGGTATGTCAGCGAGTTCAACAAGAAGGAAGGTATGACCTACGAGCTCGGGCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCANAGTACGCCGGCGCCAAGGTTGACGCCGCCGCCGCCTTGGCTTCCGTTCCGGAGGCCGAGGAGGAGGTGGTCGGCGATGTCCCTGCCGCTTGGGACTGGAGACAGCACGGAGTTGTCACTCCTGTCAAGGATCAAGGCTCGTGCGGGAGCTGCTGGGCTTTCTCGTCGGTGGGTGCGGTGGAGAGCGCCTACNCGATCGCGACGAAAAGCTGCTCCGGCTGTCGGAGCAACAGGTGCTGGACTGC]
[+] EMBL OSR3050A             [                           GGCGCTAACACACATGGAGATGAAAAATCCATTGGCAGTAGGGCTGTTGGCTCTNCTGGTGGCAGCCATGGCGGTNACGGCGGCGGCGCACGACGACGACGACGTNCCATTCACCGACGAGGNCCTGGAGTCGGAGCAGAGCATGTNGAATCTGTACGATAGGTNGCGCGNCGTGTACGCNTCGTCGTCGTCGCACCTCGGCGGCGACATCNAGAGCAGNTTCGAGGCGTTCAAGGCGAACG CAGGTATGTCAGCNAGTTCAACAAGAAGGAAGGTATGACCTACGAGCTCGGGCTCAACAAGTTCGNCGNCATGACGNTCGAGGAGTTCGTC                                                                                                                                                                                                                                                        ]
[+] EMBL OSR3216A             [                                                                                                                                                                                          cgGGTGGCGCGCCGTGTACGCCTCGTCGTCGTCGCACCTCGGCGGCGACATCGAGAGCAGGTTCGAGGCGTTCAAGGCGAACG CAGGTATGTCAGCNAGTTCAACAAGAAGGAAGGTATGACCTACGAGCTCGGGCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCAAAGTACGCCGGCGCCAAGGTTGACGNCGCCGNCGCCTTGGCTTCCGTTCCGGAGGCCGAGGAGGAGGTTGTCGGCGATNTCCCT                                                                                                                                                                 ]


>consensus_10668#2 AATAGCTAATAATTAAGAGACGATACAGGCGCTAACACACATGGAGATGAAAAATCCATT GGCAGTAGGGCTGTTGGCTCTGCTGGTGGCAGCCATGGCGGTGACGGCGGCGGCGCACGA CGACGACGACGTGCCATTCACTGACGAGGACCTGGAGTCGGAGCAGAGCATGTGGAATCT GTACGATAGGTGGCGCGCCGTGTACGCCTCGTCGTCGTCGCACCTCGGCGGCGACATCGA GAGCAGGTTCGAGGCGTTCAAGGCGAACGCAGGTATGTCAGCNAGTTCAACAAGAAGGAA GGTATGACCTACGAGCTCGGGCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTC GCANAGTACGCCGGCGCCAAGGTTGACGCCGCCGCCGCCTTGGCTTCCGTTCCGGAGGCC GAGGAGGAGGTGGTCGGCGATGTCCCTGCCGCTTGGGACTGGAGACAGCACGGAGTTGTC ACTCCTGTCAAGGATCAAGGCTCGTGCGGGAGCTGCTGGGCTTTCTCGTCGGTGGGTGCG GTGGAGAGCGCCTACNCGATCGCGACGAAAAGCTGCTCCGGCTGTCGGAGCAACAGGTGC TGGACTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10668#0      AAATAAAGTGTTTGTGCGCGCATCTATGAGAATTGAGTGTGAGCACCTGCTGCATAAAAA 60
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      CCTATCAGCGATCGAGCTCTATAAATTGCGGCCTCAATCCCATGCATCGATCTACACATT 120
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      --------------GGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTGG 46
                                                                                   

consensus_10668#0      CTTCCCCATCACTGAAAGAGATCCTCAGGCTAGCTAATTAAGATAC-ACGGACGTACAC- 178
consensus_10668#2      ------------------------AATAGCTAA-TAATTAAGAGACGATACAGGCGCTA- 34
consensus_10668#1      AGGGCGCGAACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGCTGG 106
                                                   ***    *               * *  *   

consensus_10668#0      ATACATACGGAGATGAAGAAGGCATTAGTAGTAGGGGTCTTGGCTGTGCTGATGGCCACA 238
consensus_10668#2      ACACACATGGAGATGAAAAATCCATTGGCAGTAGGGCTGTTGGCTCTGCTGGTGGCAGCC 94
consensus_10668#1      ACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATGGCT 166
                       *       ** *  *   *   ***  *  *  **     *  *   *          * 

consensus_10668#0      GCCATG-GCGGCGTCGG--CGGCTCA-GCCGC-----ATGTCCCGTTCACGGACGAGGAC 289
consensus_10668#2      ATGGCG-GTGACGGCGG--CGGCGCACGACGACGACGACGTGCCATTCACTGACGAGGAC 151
consensus_10668#1      ACGCCGTGAAGCAGGGGATCAGCCCG-GCTGGCAGCTACCCGCCATACGAGGCCAAGGAT 225
                            * *   *   **  * ** *  *  *      *    ** * *   * * **** 

consensus_10668#0      CTGGAGTCGGAGGAGAGCA----TGTGGAGCCTCT----ACCAGAGGTGGCGCGGCGCCG 341
consensus_10668#2      CTGGAGTCGGAGCAGAGCA----TGTGGAATCTGT----ACGATAGGTGGCGCG---CCG 200
consensus_10668#1      CGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGT-CGA 284
                       * **  *    *  **  *    **  *   *  *    *  *  *  *****    *  

consensus_10668#0      TGCACACCTCGTCGCTGGACATGGATGTCGCCGAGACGGAGAGCAGGTTCGAGGCGTTCA 401
consensus_10668#2      TGTACGCCTCGTCGTCGTCGCACCTCGGCGGCGACATCGAGAGCAGGTTCGAGGCGTTCA 260
consensus_10668#1      TGTGCCCGCCAGCGAGGCCGCTCTCAAGCG-CAGCGTCTACAGGGCTCCGGTCGCGGTCT 343
                       **  * *  *  **  *           ** *       * **       *  *** ** 

consensus_10668#0      AGGCGAACGCCAGGTACGTCAGCGAGTTCAACAAGAAGGAGG-GCATGACCTACAAGCTC 460
consensus_10668#2      AGGCGAACGC-AGGTATGTCAGCNAGTTCAACAAGAAGGAAG-GTATGACCTACGAGCTC 318
consensus_10668#1      CCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGGCGTGTACAGTGGGCC-GTGC 402
                             * ** *   *   *  * ** ** ***** ***  * * *       *  *  *

consensus_10668#0      GGCCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCCAAGTACACCGGTACC 520
consensus_10668#2      GGGCTCAACAAGTTCGCCGACATGACGCTCGAGGAGTTCGTCGCANAGTACGCCGGCGCC 378
consensus_10668#1      GGGACGACGGTGAACCACGGCGTGTTAGTGGTGGGGTATGGCGTGACACGGGACAACATC 462
                       **    *    *  *  ** * **    * * ** **  * **          *     *

consensus_10668#0      AAGGTGGACGCCGCTGCCATGGCTAGGGCTCCCCAGGCTGAGGAGGAGCT----GG--AG 574
consensus_10668#2      AAGGTTGACGCCGCCGCC---GCCTTGGCTTCCGTTCCGGAGGCCGAGGA----GG--AG 429
consensus_10668#1      AAGTCCTGGATCATCAAGAATTCATGGGGAAAGGAATGGGGCGATAATGGTTTCGGCCAC 522
                       ***        *          *   **           *  *   *       **  * 

consensus_10668#0      CTGGCCGGCGACGTGGCGGCTTCGTGGGAC-----TGGAGACAGCACGGA-GCTGTCACT 628
consensus_10668#2      GTGGTCGGCGATGTCCCTGCCGCTTGGGAC-----TGGAGACAGCACGGA-GTTGTCACT 483
consensus_10668#1      ATGAAGCGTGACGTCATAGCCAAAGAGGGCCTCTGTGGCATTGCCATGTATGGTGTGTAC 582
                        **    * ** **    **      ** *     ***      ** * * * ***    

consensus_10668#0      CCTGCCAGGGAGCAGGGTACGTGCGAGAGCTGCTGGGCGTTCTCGGCGGTTGGCGCGGTG 688
consensus_10668#2      CCTGTCAAGGATCAAGGCTCGTGCGGGAGCTGCTGGGCTTTCTCGTCGGTGGGTGCGGTG 543
consensus_10668#1      TCTGTCAAAAATGGTCATAAAAATTGCTCTTATCTTGCATCTCCTGCCGTTGTTGCCTCC 642
                        *** **   *                   *     ** *   *  * ** *  **    

consensus_10668#0      GAG-GGCGCGA-ACGCGATCGCGACGGGGAAGCTGGTGACGCTGTCGGAGCAGCAGGTGC 746
consensus_10668#2      GAG-AGCGCCT-ACNCGATCGCGACGAA-AAGCTGCTCCGGCTGTCGGAGCAACAGGTGC 600
consensus_10668#1      TACTAGTATTAGAGTTCAGATCAATGCGATGATCGATCAATGTGTCATAGGGCCGAGT-T 701
                        *   *      *    *   * * *        * *     ****  **   *  **  

consensus_10668#0      TGGACTGCTCCGGCGCCGGCGACTGCATCGGCGGCGGGTCGTATTTCCCGGTCCTGCATG 806
consensus_10668#2      TGGACTGC---------------------------------------------------- 608
consensus_10668#1      CGAATAAAATATTTGCATACGTCAGTGAAGTATGCATTTGTAGTTTGTTGTGCTTGAAGA 761
                        * *                                                        

consensus_10668#0      GCTACGCCGTGAAGCAGGGGATCAGCCCGGCTGGCAGCTACCCGCCATACGAGGCCAAGG 866
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ACGCAATAAATAAAAGTGGCCCTTACTTTCTTTTGT------------------------ 797
                                                                                   

consensus_10668#0      GATCGGGCCTGCAGGAGGAATACTCCTGCAGTGCCCGTGGTGAAGATGGACGGCGCAGTC 926
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      GATGTGACCGCCAGCGAGGCCGCTCTCAAGCGCAGCGTCTACAGGGCTCCGGTCGCGGTC 986
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      TCCATCGAAGCCACCCAAAGCCTCCAGCTCTACAAGGAGGTAATTAATCGAATTTAAATT 1046
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      ACTTCAAATTAAGATTAATCGTTGTAGCAAAATGAGTTAGGGGAGGTGGTCTGGTTGATT 1106
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      TGATCCATTCCTCCCGGCTTTTCTCCAGAATTGATTTAGCATCTGACTTTTTTTCCTTTT 1166
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      TTTTCAATCATATCTCTTATAATTGGTTTTTCTCCTATATATAGTACATAAAAATGTGTG 1226
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      ATAAACATGCATTTTGTCTGTCATGTGCGATAAATGCGAGTTTAATTTCTAGTGGTGTGT 1286
consensus_10668#2      ------------------------------------------------------------
consensus_10668#1      ------------------------------------------------------------
                                                                                   

consensus_10668#0      AATTAAGGACCATGTTGCGCAATACAAAAGCAAAAATACTATGCATATG 1335
consensus_10668#2      -------------------------------------------------
consensus_10668#1      -------------------------------------------------
                                                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)