cluster # 10670

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10670 cluster # 10670 Sequences # 8 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10670#0 length = 687 sequences # 8
consensusID : consensus_10670#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 687
fasta sequence
                              [TGNGNACGCGTGGGCTGGACGCGGCGGCGGCGGCGAGGAGGAGTAGAGTAGGTGAGGTGAATCGGGGGAGGGAGGAATCCAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAGCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGTTTTCAACTAGTAAGT-GCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATG-TCTGTATTGTGGGTGCAAGAGGAGAGGTTGTTCCTGTGTG-TTTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCATGTACAATTGTAACGTGTTCCAAGTTTGTGTGGAGATAACTAACCGATTGTTGAGTGCAAAAAAACAATGTTGCCTGCTAAAAAAAAA]

[+] EMBL OS0989A              [TGNGNACGCGTGGGCTGGACGCGTGGGCGGCGGCGAGGAGGAGTAGAGTAGGTGAGGTGAATCGGGGGAGGGAGGAATCCAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAACTGGACATCCTAGAGCGGAAACTNGAGGTTCTTNAGG TCAAGTGAGCAGCG AACAACCAATCCATCCGTTTT AACTAGTAAGT  CAGTTAA GGCTTCTTGTCTTNACATAAG AGTGCTTTCAATGTGTTAT                                                                                                                                                                                                                                                            ]
[+] EMBL AK120917             [                    GCGGCGGCGGCGGCGAGGAGGAGTAGAGTAGGTGAGGTGAATCGGGGGAGGGAGGAATCCAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAGCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGTTTTCAACTAGTAAGT GCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATG TCTGTATTGTGGGTGCAAGAGGAGAGGTTGTTCCTGTGTG TTTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCATGTACAATTGTAACGTGTTCCAAGTTTGTGTGGAGATAACTAACCGAT                                        ]
[+] EMBL CF278101             [                  caGCGGCGGCGGCGGCGAGGAGGAGTAGAGTAGGTGAGGTGAATCGGGGGAGGGAGGAATCCAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAGCTGGACATCCTANAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGTTTTCAACTAGTAAGT GCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATG TCTGTATTGTGGGTGCAAGAGGAGAGGTTGTTCCTGTGTG TTTCTCTGTC  TGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCATGTACAATTGTA                                                                            ]
[-] EMBL CF278102             [                                                                               CAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAGCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGTTTTCAACTAGTAAGT GCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTATAGATGATCTGTATTGTGGGTGCAAAAGAAAAGGTTGTTCCTGTGTGATATATATGTC  TGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCATGTACAATTGTAACGTGTTCCAAGTTTGT TGGAGATAACAAACCGATTGTTGAGTGCAAAAAAA                       ]
[+] EMBL AU163715             [                                                                                                    TCGATCGATCGGGAGGGGGAGATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAA CTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCG TTTCAACTAGTAAGT GCA NTAANGGCTGCTTGTCTGCACATAAGTAGT CTTTCNATGTG TATTGGTTCAAAAAGACAGA CTTTGGATG  CTGNA TGTGG                                                                                                                                                                                                                    ]
[+] EMBL AY224582             [                                                                                                                                  GCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAAGCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGT                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL OSS14154A            [                                                                                                                                                                            GCGGTGCAGGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTTCGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATNAGAAGCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAACCAATCCATCCGTTTTCAACTAGTAAGT GCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATG TCTGTATTGTGGGTGCAAGAGGAGAGGTTGTTCCTGTGTG TTTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTG TAATCTGTATNCAGTTCCA TAGCGTCAAAGGCAGCTTCTTTTCTACTCAATTCCATGTAC                                                                                   ]
[+] EMBL C99117               [                                                                                                                                                                                                                                                                                                                                                                   ACAACCAATCCACCCGTTTTCAACTAGTAAGTNCCAGTTAAGGGCTGCTTGTCTGCACATAAGTAGTGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATG TCTGTATTGTGGGTGCAAGAGGAGAGGTTGTTCCTGTGTG TTTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCATGTACAATTGTAACGTGTTCCAAGTTTGTGTGGAGATAACTAACCGATTGTTGAGTGCAAACCTGCAATGTTGCCTGCTAAAAAAAAA]




>consensus_10670#0
TGNGNACGCGTGGGCTGGACGCGGCGGCGGCGGCGAGGAGGAGTAGAGTAGGTGAGGTGA
ATCGGGGGAGGGAGGAATCCAAGAAGAAGCAGGTAATTAATCGATCGATCGGGAGGGGGA
GATGGCTCGCGCGGGCGGGCATGGGATGGGGAACCCGGTGAACGTGGGGATCGCGGTGCA
GGCGGACTGGGAGAACCGCGAGTTCATCTCCAACATCTCCCTCAACGTCCGTCGCCTCTT
CGACTTCCTCCTCCGATTCGAAGCTACTACGAAGAGCAAACTTGCGTCCTTGAATGAGAA
GCTGGACATCCTAGAGCGGAAACTGGAGGTGCTTGAGGTTCAAGTGAGCAGCGCAACAAC
CAATCCATCCGTTTTCAACTAGTAAGTGCAGTTAAGGGCTGCTTGTCTGCACATAAGTAG
TGCTTTCAATGTGTTATGGGTTCAAAAGGACAGAGCTTTGGATGTCTGTATTGTGGGTGC
AAGAGGAGAGGTTGTTCCTGTGTGTTTCTCTGTCTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTTAATCTGTATGCAGTGCCAGTAGCGTGCAAGGCAGCTTCTTTTCTACTCAATTCCAT
GTACAATTGTAACGTGTTCCAAGTTTGTGTGGAGATAACTAACCGATTGTTGAGTGCAAA
AAAACAATGTTGCCTGCTAAAAAAAAA
clustalw multiple alignements is not computed in this case