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Oryza sativa
cluster # 10677 cluster # 10677       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10677#0 length = 1313 sequences # 4  
consensus_10677#1 length = 1310 sequences # 4  

consensusID : consensus_10677#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1313
fasta sequence
                              [TGCTCTACTCTTTAGCCTCTGCCAAGAAGAAGTAGTACTCCTCTTTTCTCTGAAGAAACCAAACTTCCAATCAACAACACCAAAAAGTTTCAGACACAGAGAGTTCAGCAGCGGCAAAGCAATGGCAGACTTCTCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAGAGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTC-AAC-AACATGTGCTCTTTCCAGTAGGGG-AAGAGTGACAGAGAAAGCAAGAAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCGAGTAGAGTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCTAAAAAAAAA]

[+] EMBL AK059041             [TGCTCTACTCTTTAGCCTCTGCCAAGAAGAAGTAGTACTCCTCTTTTCTCTGAAGAAACCAAACTTCCAATCAACAACACCAAAAAGTTTCAGACACAGAGAGTTCAGCAGCGGCAAAGCAATGGCAGACTTCTCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAGAGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTC AAC AACATGTGCTCTTTCCAGTAGGGG AAGAGTGACAGAGAAAGCAAGAAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCGAGTAGAGTCTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGC                   ]
[+] EMBL BI805777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGACAGCGATGGCCTCCANGACC AAAGATTGGAGGCATGTTCCTAGAAGCCCTTGC ATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCTATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCTTTCTCTCAGGACAATGCCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTC AAC AACATGTGCTCTTTCCAGTAGGGG AAGAGTGACAGAGAAAGCAAGAAAAAAGGACCCCACATTGAC ATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCAGTCTACAACCTTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCGAGTAGAGTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCTAAAAAAAAA]
[+] EMBL BI805706             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ACAATGTCAGTTACCTGATGCAATCANTGGGGGA CCAAGGCAGCAGGAGATGCTCAATCNATTGGTGTTC AAC  ACATGTGCTCTTTCCAGTAGGGG AAGAGTGACAGAGAAAGCAAGAAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCGAGTAGAGTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGCTAaaaaaaaaa        ]
[+] EMBL BI801386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCAAGGCAGCAGGAGATGCTCAATCAATTGGTGTTCAAACAAACATGTGCTCTTTCCAGTAGGGGTAAGAGTGACAGAGAAAGCAAG  AAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCAAGTAGAGTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTTCTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTATTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCTAAAAA    ]


>consensus_10677#0 TGCTCTACTCTTTAGCCTCTGCCAAGAAGAAGTAGTACTCCTCTTTTCTCTGAAGAAACC AAACTTCCAATCAACAACACCAAAAAGTTTCAGACACAGAGAGTTCAGCAGCGGCAAAGC AATGGCAGACTTCTCACCACCAATGACCCCAACATCTCAAGCTTCTTCCTCTACAACCAC AGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGCAGCCATTGTGGAGGAT GCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCCATCTGTGGACAGGAAG AGGAAGGCAGCAGAAGACAGTGCACACTCCAAGGATAGCTGCAAGGATGGCAAGAGCAGG AGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAGCACCACTGAAGATGAGCCTCCA AAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGCAACTGATAGCCACAGCCTTGCA GAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAGGATGCTGCAAGCACTGGTCCCT GGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTACAG TCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGATTGCTTCAATGAGCCCAGTGTTG TATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCAAAAGATTGGAGGCATGTTCCAA GAAGCCCTTGCAATGCCTAATCCAGTACTGAACCAATCAAGCCCAGCTCCATCTCAAGCT ATCATGGACACAACCTCAACCACATCCTACTCACTGCAAAGCCAGCATGGAGCCATCTCT TTCTCTCAGGACAATGGCAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAG ATGCTCAATCAATTGGTGTTCAACAACATGTGCTCTTTCCAGTAGGGGAAGAGTGACAGA GAAAGCAAGAAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATT GGTAGGAGCATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGT CTGGAGGCAGTCTACAACATTGTAAGAGGATTTTGGAGGGAAGAACAGCAAGCGAGTAGA GTTTTCTACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTGGTTAGGTT CTGCCCATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGA AATTATTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCTAAAAAAAAA



consensusID : consensus_10677#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1310
fasta sequence
                              [GCAATCTAGAGAGCTTCATCTTTCAGTTCAGACACCAAGAACAAGAAGCAACTCCACCACCATATAGGTATCTCTAGCTCTAGCTAGGTAGTAGCATCTAGGACACCAAGGGCATTGGCAATGGCAGGCTTCTCACACCTCCCACAGCAGATGGAGCATGGCCTCATCACCAACAATGGCTTCCTCTTCTGCCATGGCAGCCATGGAGGAGCAGCAACCACCACAGCTCCAGCCATCCCTGAAGATGCCTCAATGGAGACCTCATCTGTGGTTCTTGACACCTCTCCACAGGACAAGAAGAGGAAGCCCAGGGAAGAAGACACTGCCAGCCTCAACTCTGCTCACTCCAAGGAGGCAAAGGAGAATGGCAGGAAGAGGGGAGGGAAGAAACACAGCAGGGATCAGATGGAGGAGGAGGC-CCTCGGGGGGTTCATCCATGTCAGGGCAAGGAGAGGGCAAGCAACAGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGAGAAAGGATCAGTGAGAGGATGAGGATGCTGCAGGCTCTGGTCCCTGGTTGTGACAAGGTCACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTGCAGTCCTTACAGAACCAAGTTGAGTTCCTTTCCATGAGGATTGCATCTCTGAGCCCTGTGCTGTATGGGTTTGGCATAGACAGTGATGCTTTCAGTGACCACTCTCAGAAGATGGAAGGAATGTTCCATGAGGCAGTTGCAATACCAGCTTCTGTCCTGAACAGAGGTAGTAGCCCAGCTCAATCTCATGCCATCATGGACACATCAAACACCTCTCCTACACCCTACACACTTCAAGTCCAGGGAGGCAGCAACAACAACTCTCTCTCCCAGGACAATGGCAGCTACATCATGCAAACAGTAGGGGAGCCAAGGCAAGAACTGTTCAATCAAGTGGTGCTCAATAATTACATGTGCTCTTTCCAGTAGGGAGGAGAGGGTGAGAGACAAAAGGCTAGGAGAAGGGACCCTACATTGACAAT---AGGAGGGAATAATAATATGATTCGATGGTTTGTGGAAGCACCAGATGAGTTTGAGATGTTGGATCGAGTCCATCCCCTTGTCTGGTGGCATGCATGCAGTAATTAAAGAGTTGTACTAGAGCTAGGATCAATTTAATTAGAAGTAGTAGTCTCTTCT-TTGTCATTGCCATTGTACTCTACTTAGACAAAAACAAGCGACCATTTGTTCATATGAAAGGGTCACTGAATTTGCTGCTGTCTCAAGGGCGATGCAACAATCTCTGAATCTTTGCAACTTTTTCGTCAAAA]

[+] EMBL CF313001             [GCAATCTAGAGAGCTTCATCTTTCAGTTCAGACACCAAGAACAAGAAGCAACTCCACCACCATATAGGTATCTCTAGCTCTAGCTAGGTAGTAGCATCTAGGACACCAAGGGCATTGGCAATGGCAGGCTTCTCACACCTCCCACAGCAGATGGAGCATGGCCTCATCACCAACAATGGCTTCCTCTTCTGCCATGGCAGCCATGGAGGAGCAGCAACCACCACAGCTCCAGCCATCCCTGAAGATGCCTCAATGGAGACCTCATCTGTGGTTCTTGACACCTCTCCACAGGACAAGAAGAGGAAGCCCAGGGAAGAAGACACTGCCAGCCTCAACTCTGCTCACTCCAAGGAGGCAAAGGAGAATGGCAGGAAGAGGGGAGGGAAGAAACACAGCAGGGATCAGATGGAGGAGGAGGC CCTCGGGGGGTTCATCCATGTCAGGGCAAGGAGAGGGCAAGCAACAGATAGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK066188             [ CAATCTAGAGAGCTTCATCTTTCAGTTCAGACACCAAGAACAAGAAGCAACTCCACCACCATATAGGTATCTCTAGCTCTAGCTAGGTAGTAGCATCTAGGACACCAAGGGCATTGGCAATGGCAGGCTTCTCACACCTCCCACAGCAGATGGAGCATGGCCTCATCACCAACAATGGCTTCCTCTTCTGCCATGGCAGCCATGGAGGAGCAGCAACCACCACAGCTCCAGCCATCCCTGAAGATGCCTCAATGGAGACCTCATCTGTGGTTCTTGACACCTCTCCACAGGACAAGAAGAGGAAGCCCAGGGAAGAAGACACTGCCAGCCTCAACTCTGCTCACTCCAAGGAGGCAAAGGAGAATGGCAGGAAGAGGGGAGGGAAGAAACACAGCAGGGATCAGATGGAGGAGGAGGCACCTC AGGGGTTCATCCATGTCAGGGCAAGGAGAGGGCAAGCAACAGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGAGAAAGGATCAGTGAGAGGATGAGGATGCTGCAGGCTCTGGTCCCTGGTTGTGACAAGGTCACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTGCAGTCCTTACAGAACCAAGTTGAGTTCCTTTCCATGAGGATTGCATCTCTGAGCCCTGTGCTGTATGGGTTTGGCATAGACAGTGATGCTTTCAGTGACCACTCTCAGAAGATGGAAGGAATGTTCCATGAGGCAGTTGCAATACCAGCTTCTGTCCTGAACAGAGGTAGTAGCCCAGCTCAATCTCATGCCATCATGGACACATCAAACACCTCTCCTACACCCTACACACTTCAAGTCCAGGGAGGCAGCAACAACAACTCTCTCTCCCAGGACAATGGCAGCTACATCATGCAAACAGTAGGGGAGCCAAGGCAAGAACTGTTCAATCAAGTGGTGCTCAATAATTACATGTGCTCTTTCCAGTAGGGAGGAGAGGGTGAGAGACAAAAGGCTAGGAGAAGGGACCCTACATTGACAAT   AGGAGGGAATAATAATATGATTCGATGGTTTGTGGAAGCACCAGATGAGTTTGAGATGTTGGATCGAGTCCATCCCCTTGTCTGGTGGCATGCATGCAGTAATTAAAGAGTTGTACTAGAGCTAGGATCAATTTAATTAGAAGTAGTAGTCTCTTCT TTGTCATTGCCATTGTACTCTACTTAGACAAAAACAAGCGACCATTTGTTCATATGAAAGGGTCACTGA                                                              ]
[-] EMBL CF313002             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CAGCTACATCATGCAAACAGTAGGGGAGCCAAGGCAAGAACTGTTCAATCAAGTGGTGCTCAATAATTACATGTGCTCTTTCCAGTAGGGAGGAGAGGGTGAGAGACAAAAGGCTAGGAGAAGGGACCCTACATTGACAATAGCAGGAGGGAATAATAATATGATTCGATGGTTTGTGGAAGCACCAGATGAGTTTGAGATGTTGGATCGAGTCCATCCCCTTGTCTGGTGGCATGCATGCAGTAATTAAAGAGTTGTACTAGAGCTAGGATCAATTTAATTAGAAGTAGTAGTCTCTTCT TTGTCATTGCCATTGTACTCTACTTAGACAAAAACAAGCGACCATTTGTTCATATGAAAGGGTCACTGAATTTGCTGCTGTCTCAAGGGCGATGCAACAATCTCTGAATCTTTGCAACTTTTTCGTCAAAA]
[-] EMBL CF312358             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACCAGATGAGTTTGAGATGTTGGATCGAGTCCATCCCCTTGTCGGGTGGCATGCATGCAGTAATTAAAAAGTTGTACTAGAGCTAGGATCAATTTAATTAGAAGTAGTAGTCTCTTCTATTGTCATTGCCATTGTACTGTACTTAGACAAAAACAAGCGACCATTTGTTCATAT                                                                            ]


>consensus_10677#1 GCAATCTAGAGAGCTTCATCTTTCAGTTCAGACACCAAGAACAAGAAGCAACTCCACCAC CATATAGGTATCTCTAGCTCTAGCTAGGTAGTAGCATCTAGGACACCAAGGGCATTGGCA ATGGCAGGCTTCTCACACCTCCCACAGCAGATGGAGCATGGCCTCATCACCAACAATGGC TTCCTCTTCTGCCATGGCAGCCATGGAGGAGCAGCAACCACCACAGCTCCAGCCATCCCT GAAGATGCCTCAATGGAGACCTCATCTGTGGTTCTTGACACCTCTCCACAGGACAAGAAG AGGAAGCCCAGGGAAGAAGACACTGCCAGCCTCAACTCTGCTCACTCCAAGGAGGCAAAG GAGAATGGCAGGAAGAGGGGAGGGAAGAAACACAGCAGGGATCAGATGGAGGAGGAGGCC CTCGGGGGGTTCATCCATGTCAGGGCAAGGAGAGGGCAAGCAACAGATAGCCACAGCCTT GCAGAGAGGGTGAGGAGAGAAAGGATCAGTGAGAGGATGAGGATGCTGCAGGCTCTGGTC CCTGGTTGTGACAAGGTCACTGGAAAGGCTCTCATTTTGGATGAGATCATCAACTATGTG CAGTCCTTACAGAACCAAGTTGAGTTCCTTTCCATGAGGATTGCATCTCTGAGCCCTGTG CTGTATGGGTTTGGCATAGACAGTGATGCTTTCAGTGACCACTCTCAGAAGATGGAAGGA ATGTTCCATGAGGCAGTTGCAATACCAGCTTCTGTCCTGAACAGAGGTAGTAGCCCAGCT CAATCTCATGCCATCATGGACACATCAAACACCTCTCCTACACCCTACACACTTCAAGTC CAGGGAGGCAGCAACAACAACTCTCTCTCCCAGGACAATGGCAGCTACATCATGCAAACA GTAGGGGAGCCAAGGCAAGAACTGTTCAATCAAGTGGTGCTCAATAATTACATGTGCTCT TTCCAGTAGGGAGGAGAGGGTGAGAGACAAAAGGCTAGGAGAAGGGACCCTACATTGACA ATAGGAGGGAATAATAATATGATTCGATGGTTTGTGGAAGCACCAGATGAGTTTGAGATG TTGGATCGAGTCCATCCCCTTGTCTGGTGGCATGCATGCAGTAATTAAAGAGTTGTACTA GAGCTAGGATCAATTTAATTAGAAGTAGTAGTCTCTTCTTTGTCATTGCCATTGTACTCT ACTTAGACAAAAACAAGCGACCATTTGTTCATATGAAAGGGTCACTGAATTTGCTGCTGT CTCAAGGGCGATGCAACAATCTCTGAATCTTTGCAACTTTTTCGTCAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10677#0      -----------TGCTCTACTCTTTAGCCTC--TGCCAAGAAGAAGTAGTA-CTCCTCTTT 46
consensus_10677#1      GCAATCTAGAGAGCTTCATCTTTCAGTTCAGACACCAAGAACAAGAAGCAACTCCACCAC 60
                                   ***  *   ** **        ******* *** ** * **** *   

consensus_10677#0      TCTCTGAAGAAACCAAACTTCCAATCAACAACACCAAAAAGTTTCAGACACAGAGAGT-T 105
consensus_10677#1      CATATAGGTATCTCTAGCTCTAGCTAGGTAGTAGCA-----TCTAGGACACCAAGGGCAT 115
                         * *    *   * * **     *    *  * **     * *  *****  ** *  *

consensus_10677#0      CAGCAGCGGCAAAGCAATGGCAGACTTCTCACCACCAATG-ACCCCAACATCTCAAGCTT 164
consensus_10677#1      TGGCAATGGCAGGCTTCT--CACACCTCCCACAGCAGATGGAGCATGGCCTCATCACCAA 173
                         ***  ****      *  ** ** ** ***  *  *** * *    * **   * *  

consensus_10677#0      CTTCCTCTACAACCACAGCCATGGCTCCCAAGCTCCACAACCTGCCAATGCAGCAGCAGC 224
consensus_10677#1      CAATGGCTTCCTCTTCTGCCATGGCAGCCATG---GAGGAGCAGCAACCACCACAGCTCC 230
                       *     ** *  *  * ********  *** *    *  * * ** *   *  ****  *

consensus_10677#0      AGCCATTGTGGAGGATGCCTCATTGGAGAGCTCAGTGTCTGCAGTTCTTGACACCTCTCC 284
consensus_10677#1      AGCCATCCCTGAAGATGCCTCAATGGAGACCTCA---TCTGTGGTTCTTGACACCTCTCC 287
                       ******    ** ********* ****** ****   ****  *****************

consensus_10677#0      ATCTGTGGACAGGAAGAGGAAGGC---AGCAGAAGACAGTGCACACTCCAAG---GATAG 338
consensus_10677#1      ACA---GGACAAGAAGAGGAAGCCCAGGGAAGAAGACACTGCCAGCCTCAACTCTGCTCA 344
                       *     ***** ********** *    * ******** ***   *  ***    * *  

consensus_10677#0      CTGCAAGGATGGCAAGAGCAGGAGAGGGAAGAAGGCCAGCAAAGAAGTGGAGGAGAAGAG 398
consensus_10677#1      CTCCAAGGA-GGCAAAGGAGAATGGCAGGAAGAGGGGAGGGAAGAAACACAGCAGG-GAT 402
                       ** ****** *****  *     *   * *  ***  **  *****    ** **  ** 

consensus_10677#0      CACCACTGAAGATGAGCCTCCAAAAGGGTACATCCATGTGAGGGCAAGGAGAGGACAGGC 458
consensus_10677#1      CAG-ATGGAGGAGGAGGCCCTCGGGGGGTTCATCCATGTCAGGGCAAGGAGAGGGCAAGC 461
                       **  *  ** ** *** * *     **** ********* ************** ** **

consensus_10677#0      AACTGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGGGAGAGGATCAGTGAGAGGATGAG 518
consensus_10677#1      AACAGATAGCCACAGCCTTGCAGAGAGGGTGAGGAGAGAAAGGATCAGTGAGAGGATGAG 521
                       *** ******************************** ** ********************

consensus_10677#0      GATGCTGCAAGCACTGGTCCCTGGTTGTGACAAGGTTACTGGAAAGGCTCTCATTTTGGA 578
consensus_10677#1      GATGCTGCAGGCTCTGGTCCCTGGTTGTGACAAGGTCACTGGAAAGGCTCTCATTTTGGA 581
                       ********* ** *********************** ***********************

consensus_10677#0      TGAGATCATCAACTATGTACAGTCGTTGCAGAACCAAGTTGAGTTCCTATCCATGAGGAT 638
consensus_10677#1      TGAGATCATCAACTATGTGCAGTCCTTACAGAACCAAGTTGAGTTCCTTTCCATGAGGAT 641
                       ****************** ***** ** ******************** ***********

consensus_10677#0      TGCTTCAATGAGCCCAGTGTTGTATGGCTTTGGAATGGACAGCGATGGCCTCCATGACCA 698
consensus_10677#1      TGCATCTCTGAGCCCTGTGCTGTATGGGTTTGGCATAGACAGTGATGCTTTCAGTGACCA 701
                       *** **  ******* *** ******* ***** ** ***** ****   **  ******

consensus_10677#0      ------AAAGATTGGAGGCATGTTCCAAGAAGCCCTTGCAATGCCTAATCCAGTACTGAA 752
consensus_10677#1      CTCTCAGAAGATGGAAGGAATGTTCCATGAGGCAGTTGCAATACCAGCTTCTGTCCTGAA 761
                              ***** * *** ******** ** **  ******* **   * * ** *****

consensus_10677#0      CCAATCAAG---CCCAGCTCCATCTCAAGCTATCATGGACACA------ACCTCAACCAC 803
consensus_10677#1      CAGAGGTAGTAGCCCAGCTCAATCTCATGCCATCATGGACACATCAAACACCTCTCCTAC 821
                       *  *   **   ******** ****** ** ************      *****  * **

consensus_10677#0      ATCCTACTCACTGCAAAGCCAGCATGG-AGC-----CATCTCTTTCTCTCAGGACAATGG 857
consensus_10677#1      ACCCTACACACTTCAAGTCCAGGGAGGCAGCAACAACAACTCTCTCTCCCAGGACAATGG 881
                       * ***** **** ***  ****   ** ***     ** **** **** ***********

consensus_10677#0      CAGTTACCTGATGCAAGCAGTGGGGGAGCCAAGGCAGCAGGAGATGCTCAATCAATTGGT 917
consensus_10677#1      CAGCTACATCATGCAAACAGTAGGGGAGCCAAGGCA---AGAACTGTTCAATCAAGTGGT 938
                       *** *** * ****** **** **************    **  ** ******** ****

consensus_10677#0      GTTCAACAA---CATGTGCTCTTTCCAGTAGGGGA---AGAGTGACAGAGAAA--GCAAG 969
consensus_10677#1      GCTCAATAATTACATGTGCTCTTTCCAGTAGGGAGGAGAGGGTGAGAGACAAAAGGCTAG 998
                       * **** **   *********************     ** **** *** ***  ** **

consensus_10677#0      AAAAAAGGACCCCACATTGACAATAGGAGGAAATAATAATGCTGCAAGATTGGTAGGAGC 1029
consensus_10677#1      GAGAAGGGACCCTACATTGACAATAGGAGGGAATAATAAT-----ATGATTCGATGGTTT 1053
                        * ** ****** ***************** *********     * **** *  **   

consensus_10677#0      ATGCAATGCACCAGATAAGTTTGAGATGTTGGATCTAGTCCATCCCCTTGTCTGGAGGCA 1089
consensus_10677#1      GTGGAA-GCACCAGATGAGTTTGAGATGTTGGATCGAGTCCATCCCCTTGTCTGGTGGCA 1112
                        ** ** ********* ****************** ******************* ****

consensus_10677#0      -GTCTACAACATTGTAAGAGG-ATTTTGGAGGGAAGAACAGCA-AGCGAGTAGAGTTTTC 1146
consensus_10677#1      TGCATGCAGTAATTAAAGAGTTGTACTAGAGCTAGGATCAATTTAATTAGAAGTAGTAGT 1172
                        *  * **  * *  *****   *  * ***  * ** **    *   ** **   *   

consensus_10677#0      TACACATTTTTCAGAGACTTTGTAATATTTTGTAGCTCCTTATTTG-GTTAGGTTCTGCC 1205
consensus_10677#1      CTCTTCTTTGTCATTGCCATTGTACTCTACT-TAGACAAAAACAAGCGACCATTTGTTCA 1231
                         *   *** ***  * * ***** * *  * ***      *   * *     ** * * 

consensus_10677#0      CATGAAGATTTCCTCAACGGCTGCACTGCCACCACCATTGTACTCTACTTCATGAAATTA 1265
consensus_10677#1      TATGAAAGGGTCACTGAATTTGCTGCTGTCTCAAGGGCGATGCAACAATCTCTGAATCTT 1291
                        *****    **    *        *** * * *      * *   * *   ****  * 

consensus_10677#0      TTTTGTTAATATAAAAAGAGAGCTATTGCTACTGTTCCTAAAAAAAAA 1313
consensus_10677#1      TGCAACTTTTTCGTCAAAA----------------------------- 1310
                       *     *  *     ** *                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)