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Oryza sativa
cluster # 10690 cluster # 10690       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10690#0 length = 1151 sequences # 6  
consensus_10690#1 length = 986 sequences # 1  
consensus_10690#2 length = 685 sequences # 1  

consensusID : consensus_10690#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1151
fasta sequence
                              [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGA-GTCCCCAAC-TGAC-AAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATA-GCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCC-CCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTTTTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCCACACGTTGGTTATCATGGTCTTGTCGACATTCTACGGAGAATAGCTAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCA-AGAAGCCGATAAATAGCACTCTGCACA-CTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGTTTGTAACGATCTTCTTT-CA-CTTTGTCCTGAAGGCTGAATCGATCAGCGCTACAAATGAGTTAGTAG-TTTTAAAAAAAGAA]

[+] EMBL AK068585             [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGA GTCCCCAAC TGAC AAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATA GCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCC CCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTTTTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCCACACGTTGGTTATCATGGTCTTGTCGACATTCTACGGAGAATAGCTAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCA AGAAGCCGATAAATAGCACTCTGCACA CTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGTTTGTAACGATCTTCTTT CA CTTTGTCCTGAAGGCTGAATCGATCAGCGCTACAAATGAGTTAGTAG TTTTAAAggttg  ]
[+] EMBL AK059910             [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGA GTCCCCAAC TGAC AAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATA GCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATACACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCC CCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTTTTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGA                                                                                                                                                                                                                                                                 ]
[+] EMBL CF311551             [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGA GTCCCCAAC TGAC AAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATANGCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CA762977             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          caGATGAGGATGTCCCCAACTTGACAAAAAAACTCAAATCAGATAGGCCGCTTCACCAGAACATA GCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCC CCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTTTTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCTACACGTTGGTTATCATGGTCTTGT GNCGTTGTACGGAGAATAGCTAGCTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCA AGAACCCGATAAATAGCAATATGCACA CTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGTTTGTAACGATCTTCTTT CA CTTTGTCCTGAAGGCTGAATCGATTAGCGCTACAAATGAGTTAGTAG TTTTAAAAAA    ]
[-] EMBL CF311552             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCCNCCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTTTTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCCACACGTTGGTTATCATGGTCTTGTCGACATTCTACGGAGAATAGCTAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCA AGGAGCCGATAAATAGCACTCTGCACA CTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGTTTGTAACGATCTTCTTT CA CTTTGTCCTGAAGGCTGAATCGATCAGCGCTACAAATGAGTTAGTAG TTTTAAAAAAA   ]
[+] EMBL BI806120             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCACAGAAGCCGATAAATAGCCCTCTGCACACCTTAGGTGTTAGGTGATTGT TGGATATTTCTTGATGGTGAGTTTGTAACGATCTTCTTTCCACCTTTGTCCTGAAGGCTGAATCGATCAGCGCTACCAATGAGTTAGTAGCTTTTAAAAAAAAAA]


>consensus_10690#0 CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGA AGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCA TCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAG GAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCA CAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTG ACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCAC AGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGAT CGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATG AGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCA TGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGC AAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGG GCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTA AGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATT GATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATACTGTT TTCCCCTGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAA GTTTGCCTTACGTCCACACGTTGGTTATCATGGTCTTGTCGACATTCTACGGAGAATAGC TAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCAAGAAGCCGATAAATAGCAC TCTGCACACTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGTTTGTAACGA TCTTCTTTCACTTTGTCCTGAAGGCTGAATCGATCAGCGCTACAAATGAGTTAGTAGTTT TAAAAAAAGAA



consensusID : consensus_10690#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 986
fasta sequence
                              [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCAGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGAAAATTGGAGTTTCTTCGATTGTGAAGATCATTGAGTTGGAGATTAGACAATGCTTGTTGATGATACTATGGGCATGTTGGCAAGTGGCATGGTTTGCCAGATTTTGACTAAACCAAATGTTGCTTCTTGGCTATGTACAATCCTCTATAGCTTCAATGAGCAGTTTTCCCTA]

[+] EMBL AK102788             [CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCAGAGGGGAAGGAGGGCTCGGGTACGTGAAGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCATCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAGGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTGACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCACAGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGAAAATTGGAGTTTCTTCGATTGTGAAGATCATTGAGTTGGAGATTAGACAATGCTTGTTGATGATACTATGGGCATGTTGGCAAGTGGCATGGTTTGCCAGATTTTGACTAAACCAAATGTTGCTTCTTGGCTATGTACAATCCTCTATAGCTTCAATGAGCAGTTTTCCCTA]


>consensus_10690#1 CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCAGAGGGGAAGGAGGGCTCGGGTACGTGA AGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCA TCTGCGAGCAGCTCGTCGAGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCAG GAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATCA CAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTTG ACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCAC AGCATGGCCAGATCTCAGAGACAAATGTCTATAACTGGTTCCAGAACAGGCGGGCACGAT CGAAACGGAAGCAAGCTGCTTTACCAAATAATAATGCAGAATCTGAAGCTGAAGCGGATG AGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAGCCA TGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCACCACTTTGACACGGAGCATGAGC AAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAGTTTGG GCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCTTGGTA AGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATATGTATT GATGACGCGGCAATTCTGGATTCTGGTTACTAGAAAATTGGAGTTTCTTCGATTGTGAAG ATCATTGAGTTGGAGATTAGACAATGCTTGTTGATGATACTATGGGCATGTTGGCAAGTG GCATGGTTTGCCAGATTTTGACTAAACCAAATGTTGCTTCTTGGCTATGTACAATCCTCT ATAGCTTCAATGAGCAGTTTTCCCTA



consensusID : consensus_10690#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence
                              [CGCGGGGGGGGGGCTTCTATATATGAAGAAGAAAAACACCCACTCTTTCTCCCCAAAAATAATATAAAACCACACTTTTTCTCCCGGCCCCCCCCCCGCGGGGGGGGGGCGCCCTCCCCCCCCCCGCAAAAAAAACACCCCCCCCATTTTTGGTGGGGGCGCCCCCTCTCCCCCCCCCAAATTAACCCCCCCCCCGGGGGGCTTCCCCCCAACAAAACAGAAGGGTTTTTTGTGGGAAATTTCCCCCCCCTTTTTTCCCCCCGGGGGGCTTAAGAAAAAACACCCGGGGGGGTTTGGGGGGGTGGCCCCCCCCCAACCCCCAATGGTCTCCCCCTTTTTTCAAGCCCCTTTTTGGGCCCAAAATTCCTTTTTTTGCCCCATTTTTTTTGTTCAATCCCAAAAATCGGTCCCTTTCCCCCGGGTAAAGGGGGAAAACCCCCGGGGACTTTTCCCCCCCCTTGCGTTCCCGGGTAAAAACCCTTTTGATTAAGGTAATTGAAGCCCCGGGCAATTTTGGGGNNNNNNTTTTTTTTTCCCCCGGGGGGTTTACTCTAAAGGTTTTCCGGTTTGGCCCTTTAGACCCCCATNNNACTGTTTTCCCCTCGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCTAAAAAAAAAAAAA]

[-] EMBL CA761282             [CGCGGGGGGGGGGCTTCTATATATGAAGAAGAAAAACACCCACTCTTTCTCCCCAAAAATAATATAAAACCACACTTTTTCTCCCGGCCCCCCCCCCGCGGGGGGGGGGCGCCCTCCCCCCCCCCGCAAAAAAAACACCCCCCCCATTTTTGGTGGGGGCGCCCCCTCTCCCCCCCCCAAATTAACCCCCCCCCCGGGGGGCTTCCCCCCAACAAAACAGAAGGGTTTTTTGTGGGAAATTTCCCCCCCCTTTTTTCCCCCCGGGGGGCTTAAGAAAAAACACCCGGGGGGGTTTGGGGGGGTGGCCCCCCCCCAACCCCCAATGGTCTCCCCCTTTTTTCAAGCCCCTTTTTGGGCCCAAAATTCCTTTTTTTGCCCCATTTTTTTTGTTCAATCCCAAAAATCGGTCCCTTTCCCCCGGGTAAAGGGGGAAAACCCCCGGGGACTTTTCCCCCCCCTTGCGTTCCCGGGTAAAAACCCTTTTGATTAAGGTAATTGAAGCCCCGGGCAATTTTGGGGNNNNNNTTTTTTTTTCCCCCGGGGGGTTTACTCTAAAGGTTTTCCGGTTTGGCCCTTTAGACCCCCATNNNACTGTTTTCCCCTCGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTTTGCCTTACGTCTAAAAAAAAAAAAA]


>consensus_10690#2 CGCGGGGGGGGGGCTTCTATATATGAAGAAGAAAAACACCCACTCTTTCTCCCCAAAAAT AATATAAAACCACACTTTTTCTCCCGGCCCCCCCCCCGCGGGGGGGGGGCGCCCTCCCCC CCCCCGCAAAAAAAACACCCCCCCCATTTTTGGTGGGGGCGCCCCCTCTCCCCCCCCCAA ATTAACCCCCCCCCCGGGGGGCTTCCCCCCAACAAAACAGAAGGGTTTTTTGTGGGAAAT TTCCCCCCCCTTTTTTCCCCCCGGGGGGCTTAAGAAAAAACACCCGGGGGGGTTTGGGGG GGTGGCCCCCCCCCAACCCCCAATGGTCTCCCCCTTTTTTCAAGCCCCTTTTTGGGCCCA AAATTCCTTTTTTTGCCCCATTTTTTTTGTTCAATCCCAAAAATCGGTCCCTTTCCCCCG GGTAAAGGGGGAAAACCCCCGGGGACTTTTCCCCCCCCTTGCGTTCCCGGGTAAAAACCC TTTTGATTAAGGTAATTGAAGCCCCGGGCAATTTTGGGGNNNNNNTTTTTTTTTCCCCCG GGGGGTTTACTCTAAAGGTTTTCCGGTTTGGCCCTTTAGACCCCCATNNNACTGTTTTCC CCTCGTAAAAAGTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAATTGCGAAGTT TGCCTTACGTCTAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10690#0      CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCGGAGGGGAAGGAGGGCTCGGGTACGTGA 60
consensus_10690#1      CGTCCTCCGGCGAGGCGGTGGACGACAGGGGCAGAGGGGAAGGAGGGCTCGGGTACGTGA 60
consensus_10690#2      ----------------------------------CGCGGGGGGGGGGCTTCTATATATGA 26
                                                          * **  ** *****    **  ***

consensus_10690#0      AGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCA 120
consensus_10690#1      AGGTGATGACGGACGAGCAGATGGAGGTGCTCCGGAAGCAGATCTCCATCTACGCCACCA 120
consensus_10690#2      AGAAGAAAAACACCCACTCTTT-----CTCCCCAAAAATA-ATATAAAACCACACTTTTT 80
                       **  **  *    * *     *       * **  **  * ** *  * * ** *     

consensus_10690#0      TCTGCGAGCAGCTCGTCG-AGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCA 179
consensus_10690#1      TCTGCGAGCAGCTCGTCG-AGATGCACCGCGCCCTCACCGCGCAGCAGGACTCCATTGCA 179
consensus_10690#2      CTCCCGGCCCCCCCCCCGCGGGGGGGGGGCGCCCTCCCCCC---------CCCCGCAAAA 131
                           **  *  * *  **  *  *    ******** ** *         * **     *

consensus_10690#0      GGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATC 239
consensus_10690#1      GGAATGAGGCTTGGTAATCTGTACTGTGATCCTCTAATGGTTCCCGGAGGTCACAAGATC 239
consensus_10690#2      AAAACAC--CCCCCCCATTTTTGGTGGGGGCGCCCCCTCTCCCCC-----CCCCAAATTA 184
                         **     *      ** * *  ** *  *  *   *    ***      * ***  * 

consensus_10690#0      ACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTT 299
consensus_10690#1      ACAGCAAGGCAGCGATGGACACCAACCCCAATGCAGTTGCAGATTCTTGAGAACATCTTT 299
consensus_10690#2      ACCCCCCCCCCGGGGGGCTTCCCCCCAACAAAACAGAAGGGTTTTTTGTGGGAAATTTCC 244
                       **  *    * * *  *    **  *  ***  ***  *    ** *   * * ** *  

consensus_10690#0      GACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCA 359
consensus_10690#1      GACCAAGGCAATGGAACACCAAGCAAGCAAAAGATAAAGGACATAACAGCAGAGCTCTCA 359
consensus_10690#2      CCCC---CCTTTTTTCCCCCCGGGGGGCTTAAGAAAAA----ACACCCGGGGGGGTTTGG 297
                         **    *  *    * **  *   **  **** ***    * * * *  * * * *  

consensus_10690#0      CAGCATGGCCAGATCTCAGAGACAAATG-TCTATAACTGGTTCCAGAACAGGCGGGCACG 418
consensus_10690#1      CAGCATGGCCAGATCTCAGAGACAAATG-TCTATAACTGGTTCCAGAACAGGCGGGCACG 418
consensus_10690#2      GGGGGTGGCCCCCCCCCAACCCCCAATGGTCTCCCCCTTTTTTCAAGCC-------CCTT 350
                         *  *****    * **    * **** ***    **  ** **   *       *   

consensus_10690#0      ATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAAT-GCAGAATCTGAAGCTGAAGCGG 477
consensus_10690#1      ATCGAAACGGAAGCAAGCTGCTTTACCAAATAATAAT-GCAGAATCTGAAGCTGAAGCGG 477
consensus_10690#2      TTTGGGCCCAAAATTCCTTTTTTTGCCCCATTTTTTTTGTTCAATCCCAA----AAATCG 406
                        * *   *  **      *  *** **  **  *  * *   ****  **    **   *

consensus_10690#0      ATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAG 537
consensus_10690#1      ATGAGGAGTCCCCAACTGACAAAAAACCCAAATCAGATAGGCCGCTTCACCAGAACATAG 537
consensus_10690#2      GTCCCTTTCCCCCGGGTAAAGGGGGAAAACCCCCGGGGACTTTTCCCCCCCCTTGCGTTC 466
                        *       ****   * *      *       * *  *     *  * **    * *  

consensus_10690#0      CCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCA--CCACTTTGACACGGAGCA 595
consensus_10690#1      CCATGAGAGATCACAATAGCGAAAGGATCTCGGAGATGCA--CCACTTTGACACGGAGCA 595
consensus_10690#2      CCGGGTAAAAACCCTTTTGATTAAGGTAATTGAAGCCCCGGGCAATTTTGG---GGNNNN 523
                       **  *  * * * *  * *   ****   * * **   *   * * ****    **    

consensus_10690#0      TGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAG 655
consensus_10690#1      TGAGCAAATCCGTCGTATGATGTATGCATCCAATGACAGTAGCTCGCGATCGTCAGGCAG 655
consensus_10690#2      NNTTTTTTTTTCCCCCGGGGGGTTTACTCTAAAGGTTTTCCGGTTTGGCCCTTTAGAC-- 581
                               *    *    *  ** * *    ** *      * *   *  * * ** *  

consensus_10690#0      TTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCT 715
consensus_10690#1      TTTGGGCCAGATGTCCTTCTACGACAATGTTATGTCAAATCCAAGAATCGATCATTTCCT 715
consensus_10690#2      CCCCATNNNACTGTTTTCCCCTCGTAA----AAAGTGAAGCTGGTAACTTGCCGTTCATT 637
                                  ***  * *      **    *     ** *    **     * **   *

consensus_10690#0      TGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATAT 775
consensus_10690#1      TGGTAAGGTGGAGAGCCCCGGGAGCTTCCCCCACATGCGATCCGGTGAAAGCTTTGATAT 775
consensus_10690#2      TTGCTTACTGAAATTGC---GAAGTTTGCCTTACGTCTAAAAAAAAAAAAA--------- 685
                       * *     ** *    *   * ** ** **  ** *   *       ***          

consensus_10690#0      GTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGGTTCGTTGCATTAGACACCATA 835
consensus_10690#1      GTATTGATGACGCGGCAATTCTGGATTCTGGTTACTAGA-------------AAATTGGA 822
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      CTGTTTTCCCCTGTAAAAA--GTGAAGCTGGTAACTTGCCGTTCATTTTGCTTACTGAAA 893
consensus_10690#1      GTTTCTTCGATTGTGAAGATCATTGAGTTGGAGATTAGACA---ATGCTTGTTGATGATA 879
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      TTGCGAAGTTTGCCTTACGTCCACACGTTGGTTATCATGGTCTTGTCGACATTCTACGGA 953
consensus_10690#1      CTATGGG--------CATGTTGGCAAGTGG-----CATGGT-TTGCCAGATTTTGACTAA 925
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      G--AATAGCTAGTTCTAGTGTAAACCTGTTCTGTTGCTGAATTAGCTGCAAGAAGCCGAT 1011
consensus_10690#1      ACCAAATGTTGCTTCTTGGCTATGTACAATCCTCTATAGCTTCAATGAGCAGTTTTCCCT 985
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      AAATAGCACTCTGCACACTTAGGTGTTAGGTGATTGTGTGGATATTTCTTGATGGTGAGT 1071
consensus_10690#1      A----------------------------------------------------------- 986
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      TTGTAACGATCTTCTTTCACTTTGTCCTGAAGGCTGAATCGATCAGCGCTACAAATGAGT 1131
consensus_10690#1      ------------------------------------------------------------
consensus_10690#2      ------------------------------------------------------------
                                                                                   

consensus_10690#0      TAGTAGTTTTAAAAAAAGAA 1151
consensus_10690#1      --------------------
consensus_10690#2      --------------------
                                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)