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Oryza sativa
cluster # 10691 cluster # 10691       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10691#0 length = 2175 sequences # 5  
consensus_10691#1 length = 443 sequences # 1  
consensus_10691#2 length = 438 sequences # 1  
consensus_10691#3 length = 424 sequences # 1  

consensusID : consensus_10691#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2175
fasta sequence
                              [CCCCTCACCTCACTCTCACTCACCCTCTTCTTCCTCCTCACGCCTCACACCGCTCAGTGACCTCGCAAACCAGCCAATGGCGCCGCCGCCGCCACCGCGGACGCTGTCGCCGTCGTCTTCGTCGCCGTCCCTGCGCTCCTCCGGCCGCCGCCCGCTCCCGTCGGCGAGACTCGTGGGAAGATGGGTGCAGCGGCCGTCGTGCTCGCTGTCGATGAATGGGTGCGGCGCGGCGGTGGCGGGGGCGGGGGCGGTGGCGGTGCGGGAGACGCGGGCGTTGCCGGCGGCGGGCGCGGCGGGGGACGCCGTGGGGCAGCTCAGGGAGGCGGTGGCGGCGCTGGAGGCCGCCGACCCGCCGGCGTCGCCCTCCGGCATCATCCGCATCGAGGTGCCCGTCCGGCAGCGAGGGGACGCCGTGGAGTGGCTGCACGCGCAGGGCGACCTGCGCGCGCGCTGCTTCTTCTCCGCGCGTGCCGCCGCTCCCTTGCCCGAGTGCCCGGCCCTCGCCATCGCCTCCGCCGGCAACGGCAACGGCAACGGAGCAGGCGGCGTCGGAGGGGAGCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGCCGTGTTCTTCCGCGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATTTCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCCACGAGCGATCATTCAGTTGAATGGGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGAGTACAATGAGCTTGAAGAGAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACTTTCTTGGACATGGCAAAATGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATCCAGTCCAATTAAAGTGAACAATTCCACCCTGCAAACAACCATACTAAATCTTAATCATGTCCCCACAAAGGCATCCTGGGATCTTGCCGTTACTAAAGCTCTCCAGATGATTAAAGGGAAGCAAAGAGAATTAGTAAAGGTCGTACTGGCAAGGTGTAGCAGATATATTACTGATACTTGCATTGACCCTGTTGAACTGTTGGCATGTTTAAAGGTTGAGGGCCAAAATGCTTATCAGTTCTGTATACAGCCACCTGATGCTCCTGCATTTGTTGGAAATAGTAGCAATTATTTCATCGGAAATACTTAAACATTTCCAGCGAGGCTTTAGCTGGTACACGAGCAAGGGGGAAAACAAGGGCTGATGACTTTCAAATTGGTCAAGATTTGCTACTAAGTAGCAAAGAGGATAATGAATTTACTATAGTACGGGACAGCATAAAGAAGAAGCTGGAGATGATCTGCGATGATGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGCTCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCAGCC-GTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTT-CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTGTTAATTATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTCTTAAAATAAATAAATATATAAACACACCATTTCACAAGCATACAAAAAAAAAA]

[+] EMBL AK120689             [CCCCTCACCTCACTCTCACTCACCCTCTTCTTCCTCCTCACGCCTCACACCGCTCAGTGACCTCGCAAACCAGCCAATGGCGCCGCCGCCGCCACCGCGGACGCTGTCGCCGTCGTCTTCGTCGCCGTCCCTGCGCTCCTCCGGCCGCCGCCCGCTCCCGTCGGCGAGACTCGTGGGAAGATGGGTGCAGCGGCCGTCGTGCTCGCTGTCGATGAATGGGTGCGGCGCGGCGGTGGCGGGGGCGGGGGCGGTGGCGGTGCGGGAGACGCGGGCGTTGCCGGCGGCGGGCGCGGCGGGGGACGCCGTGGGGCAGCTCAGGGAGGCGGTGGCGGCGCTGGAGGCCGCCGACCCGCCGGCGTCGCCCTCCGGCATCATCCGCATCGAGGTGCCCGTCCGGCAGCGAGGGGACGCCGTGGAGTGGCTGCACGCGCAGGGCGACCTGCGCGCGCGCTGCTTCTTCTCCGCGCGTGCCGCCGCTCCCTTGCCCGAGTGCCCGGCCCTCGCCATCGCCTCCGCCGGCAACGGCAACGGCAACGGAGCAGGCGGCGTCGGAGGGGAGCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGCCGTGTTCTTCCGCGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATTTCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCCACGAGCGATCATTCAGTTGAATGGGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGAGTACAATGAGCTTGAAGAGAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACTTTCTTGGACATGGCAAAATGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATCCAGTCCAATTAAAGTGAACAATTCCACCCTGCAAACAACCATACTAAATCTTAATCATGTCCCCACAAAGGCATCCTGGGATCTTGCCGTTACTAAAGCTCTCCAGATGATTAAAGGGAAGCAAAGAGAATTAGTAAAGGTCGTACTGGCAAGGTGTAGCAGATATATTACTGATACTTGCATTGACCCTGTTGAACTGTTGGCATGTTTAAAGGTTGAGGGCCAAAATGCTTATCAGTTCTGTATACAGCCACCTGATGCTCCTGCATTTGTTGGAAATAGTAGCAATTATTTCATCGGAAATACTTAAACATTTCCAGCGAGGCTTTAGCTGGTACACGAGCAAGGGGGAAAACAAGGGCTGATGACTTTCAAATTGGTCAAGATTTGCTACTAAGTAGCAAAGAGGATAATGAATTTACTATAGTACGGGACAGCATAAAGAAGAAGCTGGAGATGATCTGCGATGATGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGCTCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCAGCC GTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTT CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTGTTAATTATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTC                                                     ]
[-] EMBL CA763410             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATCCGAGCCCAGCCGGTTTGTGGTCTGCCCACTGNAGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGCCCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTTGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTGTGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCCCAGTTTGCAAAGTTATTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGA TTGC TTTTTTTTCCCTGCCATGAACTTCAAAGGATTGTCTTGTT CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGTGACGAAGAGAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTG TAACTATTCAGTTAGTGCAGTTGTGCAAGTGTATATTGAACCCCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTCTTAAAATAAATAAATATATAAACACACCATTTCACAAGCATACAAAAAAAAAA]
[-] EMBL CB621243             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGCACGCCAATTCATACAATATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGATTTGC TTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTT CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTGTTAATTATTCAGTTAGTGCAGGGGGGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTCTTTTAAAAGATAAATATATAtaanc                            ]
[+] EMBL AU096479             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTT CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTGTTAATTATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTC                                                     ]
[+] EMBL AU165321             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGAACTTCAAAGGATTGTCTTGTTNCAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTNCAAAGGCTATATGTACAATAAATTGTTAATTATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTC                                                     ]


>consensus_10691#0 CCCCTCACCTCACTCTCACTCACCCTCTTCTTCCTCCTCACGCCTCACACCGCTCAGTGA CCTCGCAAACCAGCCAATGGCGCCGCCGCCGCCACCGCGGACGCTGTCGCCGTCGTCTTC GTCGCCGTCCCTGCGCTCCTCCGGCCGCCGCCCGCTCCCGTCGGCGAGACTCGTGGGAAG ATGGGTGCAGCGGCCGTCGTGCTCGCTGTCGATGAATGGGTGCGGCGCGGCGGTGGCGGG GGCGGGGGCGGTGGCGGTGCGGGAGACGCGGGCGTTGCCGGCGGCGGGCGCGGCGGGGGA CGCCGTGGGGCAGCTCAGGGAGGCGGTGGCGGCGCTGGAGGCCGCCGACCCGCCGGCGTC GCCCTCCGGCATCATCCGCATCGAGGTGCCCGTCCGGCAGCGAGGGGACGCCGTGGAGTG GCTGCACGCGCAGGGCGACCTGCGCGCGCGCTGCTTCTTCTCCGCGCGTGCCGCCGCTCC CTTGCCCGAGTGCCCGGCCCTCGCCATCGCCTCCGCCGGCAACGGCAACGGCAACGGAGC AGGCGGCGTCGGAGGGGAGCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGC CGTGTTCTTCCGCGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATT TCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCCACGAG CGATCATTCAGTTGAATGGGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGA GTACAATGAGCTTGAAGAGAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACT TTCTTGGACATGGCAAAATGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATC CAGTCCAATTAAAGTGAACAATTCCACCCTGCAAACAACCATACTAAATCTTAATCATGT CCCCACAAAGGCATCCTGGGATCTTGCCGTTACTAAAGCTCTCCAGATGATTAAAGGGAA GCAAAGAGAATTAGTAAAGGTCGTACTGGCAAGGTGTAGCAGATATATTACTGATACTTG CATTGACCCTGTTGAACTGTTGGCATGTTTAAAGGTTGAGGGCCAAAATGCTTATCAGTT CTGTATACAGCCACCTGATGCTCCTGCATTTGTTGGAAATAGTAGCAATTATTTCATCGG AAATACTTAAACATTTCCAGCGAGGCTTTAGCTGGTACACGAGCAAGGGGGAAAACAAGG GCTGATGACTTTCAAATTGGTCAAGATTTGCTACTAAGTAGCAAAGAGGATAATGAATTT ACTATAGTACGGGACAGCATAAAGAAGAAGCTGGAGATGATCTGCGATGATGTGGTTGTC CATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGCTCAGTTAGCT GCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCA GCCGTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTATGAAATTTTT GACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCT GTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCC GGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCT CAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAAT ATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGTGAAGAAGATTTGC TTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTTCAAGTGCTTGCATACCAAT TATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCGCTGAAGCATAAATCCAAGA AGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATATGTACAATAAATTGTTAAT TATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCATAGTTTGTTAGCTTCTTTC GAATCGCTTATACATTTGATTCTTAAAATAAATAAATATATAAACACACCATTTCACAAG CATACAAAAAAAAAA



consensusID : consensus_10691#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 443
fasta sequence
                              [TGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGGTATTATTGGTCTAACTCATGATGGATTACTGCTATATTTCTTTTTTTTTAAATGCTAATGCATCCCATTTCCAATTATTTTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTTCAAGTGCTGCAACCAATAAGGTTCCGTCAATCAACACCT]

[+] EMBL OSS13922A            [TGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGGTATTATTGGTCTAACTCATGATGGATTACTGCTATATTTCTTTTTTTTTAAATGCTAATGCATCCCATTTCCAATTATTTTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTTCAAGTGCTGCAACCAATAAGGTTCCGTCAATCAACACCT]


>consensus_10691#1 TGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACT AGGAAAAGGTCATAGCACTTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCC ATCCTTTGAATGGGATGAGCTTGACCTCAAAGCATCTCAGGTATTATTGGTCTAACTCAT GATGGATTACTGCTATATTTCTTTTTTTTTAAATGCTAATGCATCCCATTTCCAATTATT TTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTGCTTGCAAGAGGCTGAAA ATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTTTGTTGGTGAAGAAGATT TGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTTCAAGTGCTGCAACCAA TAAGGTTCCGTCAATCAACACCT



consensusID : consensus_10691#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 438
fasta sequence
                              [GGCCAGTGCAGTTTTATTCAACCAAGGAATTTATTATATTTTACAGATGATCTGCGATGATGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGCTCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCAGCCGTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGGAAAAGTAAGGAAAAAATGTAGTCAGTACGGTTGATCATATAATTGGGGTGTGATGTTTTTTTGGCAAATATGTCCATGTTGTTACCNATCCTAAGGGCCAT]

[+] EMBL C71727               [GGCCAGTGCAGTTTTATTCAACCAAGGAATTTATTATATTTTACAGATGATCTGCGATGATGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGCTCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCAGCCGTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGGAAAAGTAAGGAAAAAATGTAGTCAGTACGGTTGATCATATAATTGGGGTGTGATGTTTTTTTGGCAAATATGTCCATGTTGTTACCNATCCTAAGGGCCAT]


>consensus_10691#2 GGCCAGTGCAGTTTTATTCAACCAAGGAATTTATTATATTTTACAGATGATCTGCGATGA TGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACACCTGTCAGC TCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAATACTCTTCA TCCGAGCCCAGCCGTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCATACAAGATTA TGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGGAGCTGAAAG TGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGGAAAAGTAAGGAAAAAATGTAGTC AGTACGGTTGATCATATAATTGGGGTGTGATGTTTTTTTGGCAAATATGTCCATGTTGTT ACCNATCCTAAGGGCCAT



consensusID : consensus_10691#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 424
fasta sequence
                              [GCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGCCGTGTTCTTCCGTGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATTTCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCGACAAGCGATTATTCAGTTGAATGGGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGAGTACAATGAGCTTGAAGAGAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACTTTCTTGGACATGGCAAAATGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATCCAGTCCAATTAAAGTGANCAATTCTACCCTNNNNNNNNNNATAGTAANANNNNNNNCATGTACCCANNAANNNCATNNCTNN]

[+] EMBL CF197214             [GCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGCCGTGTTCTTCCGTGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATTTCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCGACAAGCGATTATTCAGTTGAATGGGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGAGTACAATGAGCTTGAAGAGAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACTTTCTTGGACATGGCAAAATGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATCCAGTCCAATTAAAGTGANCAATTCTACCCTNNNNNNNNNNATAGTAANANNNNNNNCATGTACCCANNAANNNCATNNCTNN]


>consensus_10691#3 GCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGCCGTGTTCTTCCGTGGGAC CGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATTTCTTCCAAGGGATTGCCC ACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCGACAAGCGATTATTCAGTTGAATG GGAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTTGAGTACAATGAGCTTGAAGA GAGCTCGGTTCTCGCAACGACGATTGCATGGGATGATTCACTTTCTTGGACATGGCAAAA TGCTGTGAAGGAGCTCCAATCAACTTTGCAGAAGATATCATCCAGTCCAATTAAAGTGAN CAATTCTACCCTNNNNNNNNNNATAGTAANANNNNNNNCATGTACCCANNAANNNCATNN CTNN



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10691#0      CCCCTCACCTCACTCTCACTCACCCTCTTCTTCCTCCTCACGCCTCACACCGCTCAGTGA 60
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CCTCGCAAACCAGCCAATGGCGCCGCCGCCGCCACCGCGGACGCTGTCGCCGTCGTCTTC 120
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GTCGCCGTCCCTGCGCTCCTCCGGCCGCCGCCCGCTCCCGTCGGCGAGACTCGTGGGAAG 180
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      ATGGGTGCAGCGGCCGTCGTGCTCGCTGTCGATGAATGGGTGCGGCGCGGCGGTGGCGGG 240
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GGCGGGGGCGGTGGCGGTGCGGGAGACGCGGGCGTTGCCGGCGGCGGGCGCGGCGGGGGA 300
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CGCCGTGGGGCAGCTCAGGGAGGCGGTGGCGGCGCTGGAGGCCGCCGACCCGCCGGCGTC 360
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GCCCTCCGGCATCATCCGCATCGAGGTGCCCGTCCGGCAGCGAGGGGACGCCGTGGAGTG 420
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GCTGCACGCGCAGGGCGACCTGCGCGCGCGCTGCTTCTTCTCCGCGCGTGCCGCCGCTCC 480
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CTTGCCCGAGTGCCCGGCCCTCGCCATCGCCTCCGCCGGCAACGGCAACGGCAACGGAGC 540
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      AGGCGGCGTCGGAGGGGAGCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGC 600
consensus_10691#3      ------------------GCAGCGGCAGCGGCCGGTGAGCGTCGCCGGCGTCGGGTCCGC 42
consensus_10691#1      --------TGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGT-TCGCTGTTG--GGATTAGA 49
consensus_10691#2      -----------------GGCCAGTGCAGTTTTATTCAACCAAGGAATTTATTATATTTTA 43
                                               * **         *     *           *    

consensus_10691#0      CGTGTTCTTCCGCGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATT 660
consensus_10691#3      CGTGTTCTTCCGTGGGACCGAGCCGTTCTCCCTCCGCGACTGGCGCGCCATCAAGAGATT 102
consensus_10691#1      TCAGCACTAC--TAGGAAAAGGTCATAGCACTTTAGTT-----TATGCTGGTGCCGGAAT 102
consensus_10691#2      CAGATGATCTGCGATGATGTGGTTGT-CCATCCCAGCA------AGGCCCTTCGGAAACT 96
                              *       **    *   *         *          **         * *

consensus_10691#0      TCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCCACG-A 719
consensus_10691#3      TCTTCCAAGGGATTGCCCACTGATTCGTGCTTATGGTGCTATCCGCTTCGATGCGACA-A 161
consensus_10691#1      TGTTGAAGGTACAAATCCATCCTTT---GAATGGGATGAGCTTGACCTCAAAGCATCTCA 159
consensus_10691#2      TCCAAGAGTACAACACCTGTCAGCTC---AGTTAGCTGCAAGAATGAGGAATGAAGACGA 153
                       *     *         *       *      *  * **            * *      *

consensus_10691#0      GCGATCATTCAGTTGAATGG-GAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTT 778
consensus_10691#3      GCGATTATTCAGTTGAATGG-GAGGAATTTGGATCATTTTACTTCATTGTTCCTCAAGTT 220
consensus_10691#1      GGTATTATTGGTCTAACTCATGATGGATT---ACTGCTATATTTCTTTTTTTTTAAATGC 216
consensus_10691#2      TGAGTTTGACATCCTAAATACTCTTCATCCGAGCCCAGCCGTTTGTGGTCTGCCCACTGA 213
                           *          *          **              **      *    *    

consensus_10691#0      GAGTACAATGAGCTTGAAGAGAGCT---CGGTTCTCGCAACGACGATTGCAT--GGGATG 833
consensus_10691#3      GAGTACAATGAGCTTGAAGAGAGCT---CGGTTCTCGCAACGACGATTGCAT--GGGATG 275
consensus_10691#1      TAATGCATCCCATTTCCAATTATTTT--CAGTTTGCAAAGTTACTGCAGTATCAAGAACA 274
consensus_10691#2      AGAGGCACGCCAATTCATACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACC 273
                            **      **      *  *       *     *         * **   * *  

consensus_10691#0      ATTCACTTTCTTGGACATGGC--AAAATG---CTGTGAAGGAGCTCCAATCAAC-----T 883
consensus_10691#3      ATTCACTTTCTTGGACATGGC--AAAATG---CTGTGAAGGAGCTCCAATCAAC-----T 325
consensus_10691#1      ACATATTTGCTTGCAAGAGGCTGAAAATA---TGGGAACAGTGATTTGAATTG------T 325
consensus_10691#2      TGTTGGTTGGTTTGGAGGAGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACT 333
                             **  **       **  *** *      *     * * *   *          *

consensus_10691#0      TTGCAGAAGATATCATCCAGTCCAATTAAAGTGAACAATTCCACCCTGCAAACAACCATA 943
consensus_10691#3      TTGCAGAAGATATCATCCAGTCCAATTAAAGTGANCAATTCTACCCTNNNNNNNNNNATA 385
consensus_10691#1      AACTAGGAGTTTTTGTTTTGTTGGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAAC 385
consensus_10691#2      AGGGAAAAGTAAGGAAAAAATGTAGTCAGTACGGTTGATCATATAATTGGGGT-GTGATG 392
                           *  **           *      *          *       *          *  

consensus_10691#0      CTAAA-TCTTAATCATGTCCCCACAAAGGC-ATCCTGGGATCTTGCCGTTACTAAAGCTC 1001
consensus_10691#3      GTAANANNNNNNNCATGTACCCANNAANNNCATNNCTNN--------------------- 424
consensus_10691#1      TTCAAAGGATTGTCTTGT-TCAAGTGCTGCAACCAATAAGGTTCCGTCAATCAACACCT- 443
consensus_10691#2      TTTTTTTGGCAAATATGTCCATGTTGTTACCNATCCTAAGGGCCAT-------------- 438
                        *             ***                                          

consensus_10691#0      TCCAGATGATTAAAGGGAAGCAAAGAGAATTAGTAAAGGTCGTACTGGCAAGGTGTAGCA 1061
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GATATATTACTGATACTTGCATTGACCCTGTTGAACTGTTGGCATGTTTAAAGGTTGAGG 1121
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GCCAAAATGCTTATCAGTTCTGTATACAGCCACCTGATGCTCCTGCATTTGTTGGAAATA 1181
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GTAGCAATTATTTCATCGGAAATACTTAAACATTTCCAGCGAGGCTTTAGCTGGTACACG 1241
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      AGCAAGGGGGAAAACAAGGGCTGATGACTTTCAAATTGGTCAAGATTTGCTACTAAGTAG 1301
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CAAAGAGGATAATGAATTTACTATAGTACGGGACAGCATAAAGAAGAAGCTGGAGATGAT 1361
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CTGCGATGATGTGGTTGTCCATCCCAGCAAGGCCCTTCGGAAACTTCCAAGAGTACAACA 1421
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CCTGTCAGCTCAGTTAGCTGCAAGAATGAGGAATGAAGACGATGAGTTTGACATCCTAAA 1481
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      TACTCTTCATCCGAGCCCAGCCGTTTGTGGTCTGCCCACTGAAGAGGCACGCCAATTCAT 1541
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      ACAAGATTATGAAATTTTTGACCGTGGAATGTATGCTGGACCTGTTGGTTGGTTTGGAGG 1601
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      AGCTGAAAGTGAGTTCGCTGTTGGGATTAGATCAGCACTACTAGGAAAAGGTCATAGCAC 1661
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      TTTAGTTTATGCTGGTGCCGGAATTGTTGAAGGTACAAATCCATCCTTTGAATGGGATGA 1721
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      GCTTGACCTCAAAGCATCTCAGTTTGCAAAGTTACTGCAGTATCAAGAACAACATATTTG 1781
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CTTGCAAGAGGCTGAAAATATGGGAACAGTGATTTGAATTGTAACTAGGAGTTTTTGTTT 1841
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      TGTTGTGAAGAAGATTTGCTTTTTTTTTTCCTGCCATGAACTTCAAAGGATTGTCTTGTT 1901
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CAAGTGCTTGCATACCAATTATGTTTCCGATCAATCAAACACCTCCTACATACGCAGCCG 1961
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      CTGAAGCATAAATCCAAGAAGGCGACGAAGATAAAAGTTGCGAAGAGTACAAAGGCTATA 2021
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      TGTACAATAAATTGTTAATTATTCAGTTAGTGCAGTTGTGCAAGTATATATTGAACCTCA 2081
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      TAGTTTGTTAGCTTCTTTCGAATCGCTTATACATTTGATTCTTAAAATAAATAAATATAT 2141
consensus_10691#3      ------------------------------------------------------------
consensus_10691#1      ------------------------------------------------------------
consensus_10691#2      ------------------------------------------------------------
                                                                                   

consensus_10691#0      AAACACACCATTTCACAAGCATACAAAAAAAAAA 2175
consensus_10691#3      ----------------------------------
consensus_10691#1      ----------------------------------
consensus_10691#2      ----------------------------------
                                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)