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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10711#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3468 fasta sequence
[AAATCCGCGCGCGCCCTCGCATTCCGGGGAATTCCCAATTTAGGTTAGATCTGCGCACCGCGCCGCGCTCGGCGGCCGCCTCCGCCTGCGCCACCCAATAAGGCCGGCATGGAGGAGACGTCGACGCCGCCGCAGCCGCAGCCGCAGCCGGCGCACCCGTCTCCCCAGTTCCCGGCGGTCTTCACCCCGCCGCCGCCGCCGACGAGCGGATTCTCGTCGCGGGGCAGCCCCAGCCCGGGCACGGGCTCCGCCGCGGCGCAGGCGCAGTTCAGCACGCCGCCGGGCCCGCCGGTCTTCTCCTCCCCGCTGCGCCCCGCCGCGGTGCCCTTCCGCGCCACCCCGGCGTCGCCGCAGCCCGTGCCCTTCGCGTCCCGCGGCGGGGGCTACTCCTCCTCGTCCTCCTCCGCCGCCGTCTCGCTCCCGACCTCCTCCGGCCCGCACTTCCTCAACGGCGTCGCCACGCCCACATCCCACCTCCCGTCCTCCGCCGCCGCCCCGCCGCCTCCTCCGCCTCCGCCCCCCGAGGAGTCCCCCTACGTCCTCTTCTCCGCACACAAGGTGCTGAAGCAGAAGAAACTGCTGAATGCTCCTAGCTTAGGGTTCGGAGCTCTAGTGTCTCCTGGGAGGGAAGTGGCGCCAGGGCCAGAGACTGTGGAGCGTGATCCTCGGCGATGTCTGAACTGTGGGGCTTATGTTAATCTTTACTGTGACGTGTTGATTGGCTCTGGGCAATGGCAGTGCGTGATTTGCAAGAAGATGAATGGCAGCGAAGGGGAATTCGTTGTCTCCAGCAAGCATGATCTGCTCCAGTGGCCTGAGC-TTGCGTCATCGGCCATCGATTATGTGCAATCAGGGAATAGGAGGCCAAGCTTTGTCCCGGTGCCTGACACAAGGGTGTCTGGACCCATTTTTATCCTCATAGATGAGTGCCTTGATGAGGCACATCTACAGCATCTGCAAGGTTCATTGCATGCTTTTGTGGATACACTCCCTCCTACAGCTAGAATTGGGATCATTTCCTATGGGCGCACTGTCTCAGTGTATGATTTTTCAGAGGGGGCAGCGGTGTCAGCGGATGTGCTACCTGGAAACAAGTCGCCTACCCATGAGTCTTTGAAGGCTATAATCTATGGAACAGGTATATACCTGTCTCCTGTACATGCTTCACTGCCTGTTGCACACACAATATTCTCATCTTTGAGACCCTACCAATTGAGTTTACCGGAAGTGTCAAGGGACCGATGCATTGGTGCAGCGGTAGAGGTTGCCCTTGGTATTATCCAAGGGCCAGCAGCGGAGGTGTCCCGTGGAATAATCAAGAGATCTGGAGGCAACTACAGGATCTTGGTTTGTGCGGGTGGCCCTAGCACATTTGGTCCAGGATCAGTGCCTCATTCTGTTCAACACCCAAATTATGCCTACCTCGAGAAGACAGCTATGAAGTGGATGGAGCGTCTTGGTCATGAAGCGCAGAGGCACAGTACTGTTGTTGATATCCTTTGTGCTGGAACATGTCCTGTGAGGGTTCCTGTATTGCAGCCACTAGCAAAGTGTTCTGGAGGTGTTCTTTTACTTCATGATGATTTTGGAGAGGCCTTTGGGGTCAACCTGCAAAGAGCGTCAACTAGAGCAGCTGGTTCCCATGGCTTATTTGAGATTAGATGTTCTGATGACATGCTTGTTACTCAAGTCATTGGCCCTGGTGAAGAAGCATCTCCTGATTCCCATGAAACATTCAAGCACGATACCTCATTTTGTATCCAGATGCATAGTGTCGAGGAAACACAGAGTTTTTCCGTGTCTATGGAGTCAAAGGGTGATATCAAGAATGATTTTGTTTACTTCCAGTTTGCTGTCCATTACTCTAATATGTATCAAACAGAAATAACCAGAGTAATCACTATGAGGCTGCAAACTGTTGATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGCAAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATCGATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTTTACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGACCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGTGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGTCAGTTTTTTGTTCTCACTGAACTATTGTTCTGGTTTCTAACCGCCTTCCCTTGTAGTATGAACTCTTCTGCTCAACATTTTTTTCCTGTCTAATATAGGCCATGTCCGTTCGTAGAAAAACAGGTCACTAACATTATCGCATTTATGAAGCCCAATTTATACATATAATTTGCTTTGTAGTCTATAATATATCTTTCCATAAGATTATTGTGGCATAAGAACTTTGCATCCCTCATACAGAGTGTTCAGTTCTTTCAAACAATTTAGTCTGTCACATGACATCCAATTTCATTAACTACATTACTAGCATGTAGTACCATTTAAGCGGCACTATATGCTTTGCTTTTCTAATTGACCGCACTTTCTTGATTTTGTTATAGGAAGGGAGCTCTCAGGCTAGATATTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTACTTATGAGCAGGAGTC-AAGATT-TCCTCAGTTACGGACA-CTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCAT-CCACTTTGATGA-CCATAGTTT-CTGCGAGTGGATGCGCAG-CCTCAAATT-GGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGTTGGATAGTTCATTAATTGGATGTTTATATGATATATCTGGCCTAACTATTTTTTGGATTCCATTTGTTTGTTCAGGGCAGTGTCAGACTTTGTTCACCCTAATTAAATCGAGGACTGAA]
[+] EMBL AK070488 [AAATCCGCGCGCGCCCTCGCATTCCGGGGAATTCCCAATTTAGGTTAGATCTGCGCACCGCGCCGCGCTCGGCGGCCGCCTCCGCCTGCGCCACCCAATAAGGCCGGCATGGAGGAGACGTCGACGCCGCCGCAGCCGCAGCCGCAGCCGGCGCACCCGTCTCCCCAGTTCCCGGCGGTCTTCACCCCGCCGCCGCCGCCGACGAGCGGATTCTCGTCGCGGGGCAGCCCCAGCCCGGGCACGGGCTCCGCCGCGGCGCAGGCGCAGTTCAGCACGCCGCCGGGCCCGCCGGTCTTCTCCTCCCCGCTGCGCCCCGCCGCGGTGCCCTTCCGCGCCACCCCGGCGTCGCCGCAGCCCGTGCCCTTCGCGTCCCGCGGCGGGGGCTACTCCTCCTCGTCCTCCTCCGCCGCCGTCTCGCTCCCGACCTCCTCCGGCCCGCACTTCCTCAACGGCGTCGCCACGCCCACATCCCACCTCCCGTCCTCCGCCGCCGCCCCGCCGCCTCCTCCGCCTCCGCCCCCCGAGGAGTCCCCCTACGTCCTCTTCTCCGCACACAAGGTGCTGAAGCAGAAGAAACTGCTGAATGCTCCTAGCTTAGGGTTCGGAGCTCTAGTGTCTCCTGGGAGGGAAGTGGCGCCAGGGCCAGAGACTGTGGAGCGTGATCCTCGGCGATGTCTGAACTGTGGGGCTTATGTTAATCTTTACTGTGACGTGTTGATTGGCTCTGGGCAATGGCAGTGCGTGATTTGCAAGAAGATGAATGGCAGCGAAGGGGAATTCGTTGTCTCCAGCAAGCATGATCTGCTCCAGTGGCCTGAGC TTGCGTCATCGGCCATCGATTATGTGCAATCAGGGAATAGGAGGCCAAGCTTTGTCCCGGTGCCTGACACAAGGGTGTCTGGACCCATTTTTATCCTCATAGATGAGTGCCTTGATGAGGCACATCTACAGCATCTGCAAGGTTCATTGCATGCTTTTGTGGATACACTCCCTCCTACAGCTAGAATTGGGATCATTTCCTATGGGCGCACTGTCTCAGTGTATGATTTTTCAGAGGGGGCAGCGGTGTCAGCGGATGTGCTACCTGGAAACAAGTCGCCTACCCATGAGTCTTTGAAGGCTATAATCTATGGAACAGGTATATACCTGTCTCCTGTACATGCTTCACTGCCTGTTGCACACACAATATTCTCATCTTTGAGACCCTACCAATTGAGTTTACCGGAAGTGTCAAGGGACCGATGCATTGGTGCAGCGGTAGAGGTTGCCCTTGGTATTATCCAAGGGCCAGCAGCGGAGGTGTCCCGTGGAATAATCAAGAGATCTGGAGGCAACTACAGGATCTTGGTTTGTGCGGGTGGCCCTAGCACATTTGGTCCAGGATCAGTGCCTCATTCTGTTCAACACCCAAATTATGCCTACCTCGAGAAGACAGCTATGAAGTGGATGGAGCGTCTTGGTCATGAAGCGCAGAGGCACAGTACTGTTGTTGATATCCTTTGTGCTGGAACATGTCCTGTGAGGGTTCCTGTATTGCAGCCACTAGCAAAGTGTTCTGGAGGTGTTCTTTTACTTCATGATGATTTTGGAGAGGCCTTTGGGGTCAACCTGCAAAGAGCGTCAACTAGAGCAGCTGGTTCCCATGGCTTATTTGAGATTAGATGTTCTGATGACATGCTTGTTACTCAAGTCATTGGCCCTGGTGAAGAAGCATCTCCTGATTCCCATGAAACATTCAAGCACGATACCTCATTTTGTATCCAGATGCATAGTGTCGAGGAAACACAGAGTTTTTCCGTGTCTATGGAGTCAAAGGGTGATATCAAGAATGATTTTGTTTACTTCCAGTTTGCTGTCCATTACTCTAATATGTATCAAACAGAAATAACCAGAGTAATCACTATGAGGCTGCAAACTGTTGATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGCAAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATCGATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTTTACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGACCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGTGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGTCAGTTTTTTGTTCTCACTGAACTATTGTTCTGGTTTCTAACCGCCTTCCCTTGTAGTATGAACTCTTCTGCTCAACATTTTTTTCCTGTCTAATATAGGCCATGTCCGTTCGTAGAAAAACAGGTCACTAACATTATCGCATTTATGAAGCCCAATTTATACATATAATTTGCTTTGTAGTCTATAATATATCTTTCCATAAGATTATTGTGGCATAAGAACTTTGCATCCCTCATACAGAGTGTTCAGTTCTTTCAAACAATTTAGTCTGTCACATGACATCCAATTTCATTAACTACATTACTAGCATGTAGTACCATTTAAGCGGCACTATATGCTTTGCTTTTCTAATTGACCGCACTTTCTTGATTTTGTTATAGGAAGGGAGCTCTCAGGCTAGATATTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTACTTATGAGCAGGAGTC AAGATT TCCTCAGTTACGGACA CTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCAT CCACTTTGATGA CCATAGTTT CTGCGAGTGGATGCGCAG CCTCAAATT GGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGTTGGATAGTTCATTAATTGGATGTTTATATGATATATCTGGCCTAACTATTTTTTGGATTCCATTTGTTTGTTCAGGGCAGTGTCAGACTTTGTTCACCCTAATTAAATCGAGGACTGAA]
[-] EMBL AU083564 [ gaaCTAAGTCCTCTTCNCCGCACACAAGGTGCTGAAGCAGAAGAAACNGCTGAATGCTCCTAGCTTAGGGTTCGGAGCTCTAGTGTCTCCNGGGAGGGAAGTGGCGCCAGGGCCAGAGACTGTGGAGCGTGATCCTCGGCGATGTCTGAACTGTGGGGCTTATGTTAATCTTTACNGTGACGTGTTGATNGGCTCTGGGCAATGGCAGTACGTGATTTGCAAGAAGATGAATGGCAGCGAAGGGGAATTCGTTGTCTCCAGCAAGCATGATCNGCTCCAGTGGCCTGAGC TTGCGTCATCGGCCATCGATTATNTGCAATCAGGGAATAGGAGGCCAAGCTTTGTCCCGGTNCCTGACACAAGGGTGTCTGGACCCATTTTTATCCTCATAGATGAGTNCCTTGATGAGGCACATCTACAGCATCTGCAAGGTTCATNGCATGCTTTTGTGGATACACNCCCTCCTACAGCTAGAATTGGGATCATTTCCTATGGGCGCACTGTCTCAGTGTATGATTTTTCAGAGGGGGCAGCGGTGTC ]
[+] EMBL CB681600 [ CCTGACCTTTGCGTCATCGGCCATCGATTATGTGCAATCAGGGAATAGGAGGCCAAGCTTTGTCCCGGTGCCTGACACAAGGGTGTCTGGACCCATTTTTATCCTCATAGATGAGTGCCTTGATGAGGCACATCTACAGCATCTGCAAGGTTCATTGCATGCTTTTGTGGATACACTCCCTCCTACAGCTAGAATTGGGATCATTTCCTATGGGCGCACTGTCTCAGTGTATGATTTTTCAGAGGGGGCAGCGGTGTCAGCGGATGTGCTACCTGGAAACAAGTCGCCTACCCATGAGTCTTTGAAGGCTATAATCTATGGAACAGGTATATACCTGTCTCCTGTACATGCTTCACTGCCTGTTGCACACACAATATTCTCATCTTTGAGACCCTACCAATTGAGTTTACCGGAAGTGTCAAGGGACCGATGCATTGGTGCAGCGGTAGAGGTTGCCCTTGGTATTATCCAAGGGCCAGCAGCGGAGGTGTCCCGTGGAATAATCAAGAGATCTGGAGGCAACTACAGGATCTTGGTTTGTGCGGGTGGCCCTAGCACATTTGGTCCAGGATCAGTGCCTCATTCTGTTCAACACCCAAATTATGCCTACCTCGAGAAGACAGCTATGAAGTGGATGGAGCGTCTTGGTCATGAAGCGCAGAGGCACAGTACTGTTGTTGATATCCTGTGTGCTGGAACATGTCCTGTGAGGGATCCTGTATTGCAGCCACTAGCAAAGTGTTCT ]
[+] EMBL CA766196 [ ATCTCCTGATTCCCATGAAACATTCAAGCACGATACCTCATTTTGTATCCAGATGCATAGTGTCGAGGAAACACAGAGTTTTTCCGTGTCTATGGAGTCAAAGGGTGATATCAAGAATGATTTTGTTTACTTCCAGTTTGCTGTCCATTACTCTAATATGTATCAAACAGAAATAACCAGAGTAATCACTATTAGGCTGCAAACTGTTGATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGCAAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATCGATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTTTACCGGTTTCCAAAAGAGCTGGCATCACTACCTGAGTGTTTGTTTCATTTGAGAAGGGGACCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGCGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTNCGNTTTNCGGCTCCCAGGATAC ]
[-] EMBL OSS1658A [ GAGCAGGAGTCAAAGATTCCCCTAAGTTAGGGAAACCTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCATCCCACTTTGATGACCCATAGTTTCCTGCGAGTGGATGCGCAGCCCTCAAATTGGGTCCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGTTGGA ]
[-] EMBL OSS1501A [ TTNCTGATAGAGTTCCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGTTGGA ]
consensusID : consensus_10711#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1085 fasta sequence
[AATAACCAGAGTAATCACTATGAGGCTGCAAACTGTTGATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGCAAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATCGATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTTTACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGACCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGCGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGAAGGGAGCTCTCAGGCTAGATATTTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTACTTATGAGCAGGAGTCAAGATTTCCTCAGTTACGGACACTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCATCCACTTTGATGACCATAGTTTCTGCGAGTGGATGCGCAGCCTCAAATTGGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGT]
[+] EMBL AK059365 [AATAACCAGAGTAATCACTATGAGGCTGCAAACTGTTGATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGCAAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATCGATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTTTACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGACCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGCGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGAAGGGAGCTCTCAGGCTAGATATTTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTACTTATGAGCAGGAGTCAAGATTTCCTCAGTTACGGACACTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCATCCACTTTGATGACCATAGTTTCTGCGAGTGGATGCGCAGCCTCAAATTGGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGT]
[-] EMBL CB681601 [ GTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTCTTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGCGAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGCGGTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAAGAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAGCTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGAAGGGAGCTCTCAGGCTAGATATTTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTACTTATGAGCAGGAGTCAAGATTTCCTCAGTTACGGACACTTACTCCTGAACAAAGGTCTAGGTTGAAGAGCAGCTTCATCCACTTTGATGACCATAGTTTCTGCGAGTGGATGCGCAGCCTCAAATTGGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGCTGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGAAGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTGGGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGTCAaaaaaaaga ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10711#0 AAATCCGCGCGCGCCCTCGCATTCCGGGGAATTCCCAATTTAGGTTAGATCTGCGCACCG 60
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CGCCGCGCTCGGCGGCCGCCTCCGCCTGCGCCACCCAATAAGGCCGGCATGGAGGAGACG 120
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TCGACGCCGCCGCAGCCGCAGCCGCAGCCGGCGCACCCGTCTCCCCAGTTCCCGGCGGTC 180
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTCACCCCGCCGCCGCCGCCGACGAGCGGATTCTCGTCGCGGGGCAGCCCCAGCCCGGGC 240
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 ACGGGCTCCGCCGCGGCGCAGGCGCAGTTCAGCACGCCGCCGGGCCCGCCGGTCTTCTCC 300
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TCCCCGCTGCGCCCCGCCGCGGTGCCCTTCCGCGCCACCCCGGCGTCGCCGCAGCCCGTG 360
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CCCTTCGCGTCCCGCGGCGGGGGCTACTCCTCCTCGTCCTCCTCCGCCGCCGTCTCGCTC 420
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CCGACCTCCTCCGGCCCGCACTTCCTCAACGGCGTCGCCACGCCCACATCCCACCTCCCG 480
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TCCTCCGCCGCCGCCCCGCCGCCTCCTCCGCCTCCGCCCCCCGAGGAGTCCCCCTACGTC 540
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CTCTTCTCCGCACACAAGGTGCTGAAGCAGAAGAAACTGCTGAATGCTCCTAGCTTAGGG 600
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTCGGAGCTCTAGTGTCTCCTGGGAGGGAAGTGGCGCCAGGGCCAGAGACTGTGGAGCGT 660
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GATCCTCGGCGATGTCTGAACTGTGGGGCTTATGTTAATCTTTACTGTGACGTGTTGATT 720
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GGCTCTGGGCAATGGCAGTGCGTGATTTGCAAGAAGATGAATGGCAGCGAAGGGGAATTC 780
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GTTGTCTCCAGCAAGCATGATCTGCTCCAGTGGCCTGAGCTTGCGTCATCGGCCATCGAT 840
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TATGTGCAATCAGGGAATAGGAGGCCAAGCTTTGTCCCGGTGCCTGACACAAGGGTGTCT 900
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GGACCCATTTTTATCCTCATAGATGAGTGCCTTGATGAGGCACATCTACAGCATCTGCAA 960
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GGTTCATTGCATGCTTTTGTGGATACACTCCCTCCTACAGCTAGAATTGGGATCATTTCC 1020
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TATGGGCGCACTGTCTCAGTGTATGATTTTTCAGAGGGGGCAGCGGTGTCAGCGGATGTG 1080
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CTACCTGGAAACAAGTCGCCTACCCATGAGTCTTTGAAGGCTATAATCTATGGAACAGGT 1140
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 ATATACCTGTCTCCTGTACATGCTTCACTGCCTGTTGCACACACAATATTCTCATCTTTG 1200
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 AGACCCTACCAATTGAGTTTACCGGAAGTGTCAAGGGACCGATGCATTGGTGCAGCGGTA 1260
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GAGGTTGCCCTTGGTATTATCCAAGGGCCAGCAGCGGAGGTGTCCCGTGGAATAATCAAG 1320
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 AGATCTGGAGGCAACTACAGGATCTTGGTTTGTGCGGGTGGCCCTAGCACATTTGGTCCA 1380
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GGATCAGTGCCTCATTCTGTTCAACACCCAAATTATGCCTACCTCGAGAAGACAGCTATG 1440
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 AAGTGGATGGAGCGTCTTGGTCATGAAGCGCAGAGGCACAGTACTGTTGTTGATATCCTT 1500
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TGTGCTGGAACATGTCCTGTGAGGGTTCCTGTATTGCAGCCACTAGCAAAGTGTTCTGGA 1560
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GGTGTTCTTTTACTTCATGATGATTTTGGAGAGGCCTTTGGGGTCAACCTGCAAAGAGCG 1620
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TCAACTAGAGCAGCTGGTTCCCATGGCTTATTTGAGATTAGATGTTCTGATGACATGCTT 1680
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GTTACTCAAGTCATTGGCCCTGGTGAAGAAGCATCTCCTGATTCCCATGAAACATTCAAG 1740
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 CACGATACCTCATTTTGTATCCAGATGCATAGTGTCGAGGAAACACAGAGTTTTTCCGTG 1800
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TCTATGGAGTCAAAGGGTGATATCAAGAATGATTTTGTTTACTTCCAGTTTGCTGTCCAT 1860
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TACTCTAATATGTATCAAACAGAAATAACCAGAGTAATCACTATGAGGCTGCAAACTGTT 1920
consensus_10711#1 -----------------------AATAACCAGAGTAATCACTATGAGGCTGCAAACTGTT 37
*************************************
consensus_10711#0 GATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGC 1980
consensus_10711#1 GATGGTTTATCTGCATATCTGGCAAGTGTGCAGGATGATGTTGCTTCGGTCATCATTGGC 97
************************************************************
consensus_10711#0 AAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATC 2040
consensus_10711#1 AAGAGAACTGTCTTGCGTGCCAGAACTGCCTCAGATGCTATTGACATGAGGCTCACAATC 157
************************************************************
consensus_10711#0 GATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTT 2100
consensus_10711#1 GATGAAAGAGTTAAGGACTTAGCTCTCAAATTTGGTACTCAAGTTCCAAAATCAAAGCTT 217
************************************************************
consensus_10711#0 TACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGA 2160
consensus_10711#1 TACCGGTTTCCAAAAGAGCTGGCATCACTACCTGGGTGTTTGTTTCATTTGAGAAGGGGA 277
************************************************************
consensus_10711#0 CCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTC 2220
consensus_10711#1 CCACTCTTAGGTAGCATAGTAGGACATGAAGATGAGCGATCTGTCCTTAGGAATTTGTTC 337
************************************************************
consensus_10711#0 TTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGC 2280
consensus_10711#1 TTGAATGCCTCATTTGACCTCTCGTTCCGTATGTTAGCACCTCGTTGTATAATGCACCGC 397
************************************************************
consensus_10711#0 GAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGTG 2340
consensus_10711#1 GAAGGTGGTACCTTTGAGGAGCTGCCAGCATATGATCTTGCCATGCAATCTAATGCTGCG 457
********************************************************** *
consensus_10711#0 GTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAA 2400
consensus_10711#1 GTGGTATTGGACCATGGAACTGATATTTTCATATGGTTGGGTGCTGAACTAGCAGCCCAA 517
************************************************************
consensus_10711#0 GAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAG 2460
consensus_10711#1 GAAGGACAAAGTGCTGCAGCTTTAGCAGCATGCCGTACACTGGCTGAAGAACTCAGCGAG 577
************************************************************
consensus_10711#0 CTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAGTCAGTTTTTTGTTCTCACTGAAC 2520
consensus_10711#1 CTCCGTTTTCCGGCTCCCAGGATACTTTCATTCAAAG----------------------- 614
*************************************
consensus_10711#0 TATTGTTCTGGTTTCTAACCGCCTTCCCTTGTAGTATGAACTCTTCTGCTCAACATTTTT 2580
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTCCTGTCTAATATAGGCCATGTCCGTTCGTAGAAAAACAGGTCACTAACATTATCGCAT 2640
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTATGAAGCCCAATTTATACATATAATTTGCTTTGTAGTCTATAATATATCTTTCCATAA 2700
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 GATTATTGTGGCATAAGAACTTTGCATCCCTCATACAGAGTGTTCAGTTCTTTCAAACAA 2760
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTTAGTCTGTCACATGACATCCAATTTCATTAACTACATTACTAGCATGTAGTACCATTT 2820
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 AAGCGGCACTATATGCTTTGCTTTTCTAATTGACCGCACTTTCTTGATTTTGTTATAGGA 2880
consensus_10711#1 -----------------------------------------------------------A 615
*
consensus_10711#0 AGGGAGCTCTCAGGCTAGATATTT-GTCTCACGCCTTATCCCAGCTCACAAGGACCCTAC 2939
consensus_10711#1 AGGGAGCTCTCAGGCTAGATATTTTGTCTCACGCCTTATCCCAGCTCACAAGGACCCTAC 675
************************ ***********************************
consensus_10711#0 TTATGAGCAGGAGTCAAGATTTCCTCAGTTACGGACACTTACTCCTGAACAAAGGTCTAG 2999
consensus_10711#1 TTATGAGCAGGAGTCAAGATTTCCTCAGTTACGGACACTTACTCCTGAACAAAGGTCTAG 735
************************************************************
consensus_10711#0 GTTGAAGAGCAGCTTCATCCACTTTGATGACCATAGTTTCTGCGAGTGGATGCGCAGCCT 3059
consensus_10711#1 GTTGAAGAGCAGCTTCATCCACTTTGATGACCATAGTTTCTGCGAGTGGATGCGCAGCCT 795
************************************************************
consensus_10711#0 CAAATTGGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGC 3119
consensus_10711#1 CAAATTGGTTCCACCTGAACCAAGCTAATACCAACAATCGGATCCCTAAAGGTGGATAGC 855
************************************************************
consensus_10711#0 TGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGA 3179
consensus_10711#1 TGAAGAACCCAAGGCTTGGTTTCTGATAGAGTTGCGAAACGATAGCTGAAAGTTTTGTGA 915
************************************************************
consensus_10711#0 AGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTG 3239
consensus_10711#1 AGTAACATTGTGCATTGCGGGACACATGCCAATGCCAAACACATTTTGTTTGGAGTGGTG 975
************************************************************
consensus_10711#0 GGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGT 3299
consensus_10711#1 GGAGTTGTATGATTTTGCCCGATTCTTTCTTCTGACGCCATAGCATACAGTTTAAATTGT 1035
************************************************************
consensus_10711#0 CACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGTTGGATAGTTC 3359
consensus_10711#1 CACTTGTCTTGCAGGCGCCAAATTTACACAATAAAATGGTCTCCTCCTGT---------- 1085
**************************************************
consensus_10711#0 ATTAATTGGATGTTTATATGATATATCTGGCCTAACTATTTTTTGGATTCCATTTGTTTG 3419
consensus_10711#1 ------------------------------------------------------------
consensus_10711#0 TTCAGGGCAGTGTCAGACTTTGTTCACCCTAATTAAATCGAGGACTGAA 3468
consensus_10711#1 -------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||