These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10718#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1740 fasta sequence [CCACCACCAGCCGCCATTCTCTCCTCGATTTCCCTCCACCGTCGCCGCCATGCCATTCTCCCCTCCGTGCCTGGACCCCGCCGCCGCCGCCGCCGCCTCCCTCTCCTTCCTCCCCGCCGCCGCCGCGAGGCCACCGGCGCCATGCGCGGTGGCGCCGCGCTCGCGCCGGGCGCTGAGGGTGGCGGCATCCGTGGCCACGGCCCCGGAGTCGGCGGCCGCGCAGGGGCGGCTGGAGTCGCTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCAGAGGGAAAGAAGTTTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAGTTGGTAATGGAGCAGTAGTTCATCTTCCTGGGTTCTTCAAAGAAATTGATGGGTTAGAATCAAATGGAATTTCCTGTGAAGGAAGAATTTTAGTATCAGATCGTGCCCATCTTTTGTTTGACTTTCATCAAACTGTTGACGGGCTCAGAGAGGTAGAGCTTGGAAATTCCCTTATAGGAACAACAAAGAGGGGAATTGGGCCATGCTATTCAAACAAAGTTATAAGGAATGGACTTAGAGTCAGTGATCTGCGGCATATGGATACATTTGGTGCTAAACTCAATACCTTGCTGAGAGATGCAGCTCTGCGCTTTGAAGGATTTGAATACAGTACCAAGACCCTTAAAGAGGAGGTTGAGAAGTACGAAAAGTTTGCCGAGCGTCTAGGACCTTATATTACTGATACCGTGCACTTCATGAATCAATCAATCTTGCAGAATAAGAAAATATTGGTTGAAGGTGGTCAAGCCACCATGTTAGACATTGACTTTGGTACTTACCCATTTGTTACTTCCTCGAGTCCCTCAGCTGGTGGTATTTGCACTGGCCTTGGTATTGCTCCTAGAAGTATCGGTGATCTCATTGGAGTGGTAAAAGCTTACACAACCAGGGTAGGTTCTGGCCCATTCCCAACAGAGCTGTTGGGTAAGACTGGTGATTTGCTCCGCGCTTCTGGAATGGAGTTTGGGACAACGACAGGTCGACCGAGGCGCTGTGGCTGGCTTGATATAGTTGCACTCAAGTACTGCTGCCAAATAAACGGTTTCTCATCTTTAAATCTGACCAAACTCGACGTGTTAACTGGCCTCAAGGAAGTAAAGCTGGGAATTGCATATTGTACTGAAGATGGTAAAGAAATTGAATCATTCCCTGCAGACCTTGATCTTCTGGAGAAAATTAAGGTCAAATATGAGGTTCTACCTGGGTGGGAGGACGACATTTCCTCTGTACGAAACTACAGCGATCTCCCAGAGACTGCTCGTTTGTACGTGGAGAGGATAGAAGAGCTGGTTGGTATCCCAGTCCATTACATCGGCGTAGGACCAGGGCGTGATGCTCTCATATACAAATAGGGGGACTTCAGGAAGCACGTATCCTATCAAATTCGTTGTTTAGGGCAATACCAATTTTGTTATTCCCTAATAAGAAAGACACTGGTTGATTGGACTGTATAAAGGCCTGGAGGGTGTAGGAATTCCAAA-ATCTTTTTTTGCCCTAACAAGATTAAATACGGTCCCCGCTGCTGTCCAATGGATATTCTTTTTCTAGCTATTGTCAATATATTAGTGGAATT] [+] EMBL CB638392 [CCACCACCAGCCGCCATTCTCTCCTCGATTTCCCTCCACCGTCGCCGCCATGCCATTCTCCCCTCCGTGCCTGGACCCCGCCGCCGCCGCCGCCGCCTCCCTCTCCTTCCTCCCCGCCGCCGCCGCGAGGCCACCGGCGCCATGCGCGGTGGCGCCGCGCTCGCGCCGGGCGCTGAGGGTGGCGGCATCCGTGGCCACGGCCCCGGAGTCGGCGGCCGCGCAGGGGCGGCTGGAGTCGCTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCANAGGGAAAGAAGTTTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAG ] [+] EMBL CB636897 [CCACCACCAGCCGCCATTCTCTCCTCGATTTCCCTCCACCGTCGCCGCCATGCCATTCTCCCCTCCGTGCCTGGACCCCGCCGCCGCCGCCGCCGCCTCCCTCTCCTTCCTCCCCGCCGCCGCCGCGAGGCCACCGGCGCCATGCGCGGTGGCGCCGCGCTCGCGCCGGGCGCTGAGGGTGGCGGCATCCGTGGCCACGGCCCCGGAGTCGGCGGCCGCGCAGGGGCGGCTGGAGTCGCTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCAGAGGGAAAGAAGTNTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAGTTGGTAAT ] [+] EMBL AK120407 [ TTCTCTCCTCGATTTCCCTCCACCGTCGCCGCCATGCCATTCTCCCCTCCGTGCCTGGACCCCGCCGCCGCCGCCGCCGCCTCCCTCTCCTTCCTCCCCGCCGCCGCCGCGAGGCCACCGGCGCCATGCGCGGTGGCGCCGCGCTCGCGCCGGGCGCTGAGGGTGGCGGCATCCGTGGCCACGGCCCCGGAGTCGGCGGCCGCGCAGGGGCGGCTGGAGTCGCTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCAGAGGGAAAGAAGTTTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAGTTGGTAATGGAGCAGTAGTTCATCTTCCTGGGTTCTTCAAAGAAATTGATGGGTTAGAATCAAATGGAATTTCCTGTGAAGGAAGAATTTTAGTATCAGATCGTGCCCATCTTTTGTTTGACTTTCATCAAACTGTTGACGGGCTCAGAGAGGTAGAGCTTGGAAATTCCCTTATAGGAACAACAAAGAGGGGAATTGGGCCATGCTATTCAAACAAAGTTATAAGGAATGGACTTAGAGTCAGTGATCTGCGGCATATGGATACATTTGGTGCTAAACTCAATACCTTGCTGAGAGATGCAGCTCTGCGCTTTGAAGGATTTGAATACAGTACCAAGACCCTTAAAGAGGAGGTTGAGAAGTACGAAAAGTTTGCCGAGCGTCTAGGACCTTATATTACTGATACCGTGCACTTCATGAATCAATCAATCTTGCAGAATAAGAAAATATTGGTTGAAGGTGGTCAAGCCACCATGTTAGACATTGACTTTGGTACTTACCCATTTGTTACTTCCTCGAGTCCCTCAGCTGGTGGTATTTGCACTGGCCTTGGTATTGCTCCTAGAAGTATCGGTGATCTCATTGGAGTGGTAAAAGCTTACACAACCAGGGTAGGTTCTGGCCCATTCCCAACAGAGCTGTTGGGTAAGACTGGTGATTTGCTCCGCGCTTCTGGAATGGAGTTTGGGACAACGACAGGTCGACCGAGGCGCTGTGGCTGGCTTGATATAGTTGCACTCAAGTACTGCTGCCAAATAAACGGTTTCTCATCTTTAAATCTGACCAAACTCGACGTGTTAACTGGCCTCAAGGAAGTAAAGCTGGGAATTGCATATTGTACTGAAGATGGTAAAGAAATTGAATCATTCCCTGCAGACCTTGATCTTCTGGAGAAAATTAAGGTCAAATATGAGGTTCTACCTGGGTGGGAGGACGACATTTCCTCTGTACGAAACTACAGCGATCTCCCAGAGACTGCTCGTTTGTACGTGGAGAGGATAGAAGAGCTGGTTGGTATCCCAGTCCATTACATCGGCGTAGGACCAGGGCGTGATGCTCTCATATACAAATAGGGGGACTTCAGGAAGCACGTATCCTATCAAATTCGTTGTTTAGGGCAATACCAATTTTGTTATTCCCTAATAAGAAAGACACTGGTTGATTGGACTGTATAAAGGCCTGGAGGGTGTAGGAATTCCAAA ATCTTTTTTTGCCCTAACAAGATTAAATACGGTCCCCGCTGCTGTCCAATGGATATTCTTTTTCTAGCTATTGTCAATATATTAGTGGAAT ] [+] EMBL CB637872 [ CCCTCCGTGCCTGGACCCCGCCGCCGCCGCCGCCGCCTCCCTCTCCTTCCTCCCCGCCGCCGCCGCGAGGCCACCGGCGCCATGCGCGGTGGCGCCGCGCTCGCGCCGGGCGCTGAGGGTGGCGGCATCCGTGGCCACGGCCCCGGAGTCGGCGGCCGCGCAGGGGCGGCTGGAGTCGCTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCAGAGGGAAAGAAGTTTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAGTTGGTAATGGAGCAGTAGTTCATCTTCCTGGGTTCTTCAAAGAAATTGATGGGTTAGAATCAAATGGAATTTCCTGTGAAAGAAGAATTTTAGTATCAGATCGTGC ] [+] EMBL CF325162 [ CTGAGCCAGGTGGCCGGGGTGCTGGGCACGCAGTGGGGCGACGAGGGGAAGGGAAAGCTCGTCGACATCCTCGCGCAGCGCTTCGACATCGTCGCACGCTGCCAGGGTGGAGCTAATGCTGGGCATACTATATATAATTCAGAGGGAAAGAAGTTTTCATTACATCTTGTTCCATCAGGTATCCTCAATGAGAAGACAATGTGTGTAGTTGGTAATGGAGCAGTAGTTCATCTTCCTGGGTTCTTCAAAGAAATTGATGGGTTAGAATCAAATGGAATTTCCTGTGAAGGAAGAATTTTAGTATCAGATCGTGCCCATCTTTTGTTTGACTTTCATCAAACTGTTGACGGGCTCAGAGAGGTAGAGCTTGGAAATTCCCTTATAGGAACAACAAAGAGGGGAATTGGGCCATGCTATTCAAACAAAGTTATAAGGAATGGACTTAGAGTCAGTGATCTGCGGCATATGGATACATTTGGTGCTAAACTCAATACCTTGCTGAGAGATGC ] [+] EMBL CB635653 [ GTGATTTGCTCCGCGCTTCTGGAATGGAGTTTGGGACAACGACAGGTCGACCGAGGCGCTGTGGCTGGCTTGATATAGTTGCACTCAAGTACTGCTGCCAAATAAACGGTTTCTCATCTTTAAATCTGACCAAACTCGACGTGTTAACTGGCCTCAAGGAAGTAAAGCTGGGAATTGCATATTGTACTGAAGATGGTAAAGAAATTGAATCATTCCCTGCAGACCTTGATCTTCTGGAGAAAATTAAGGTCAAATATGAGGTTCTACCTGGGTGGGAGGACGACATTTCCTCTGTACGAAACTACAGCGATCTCCCAGAGACTGCTCGTTTGTACGTGGAGAGGATAGAAGAGCTGGTTGGTATCCCAGTCCATTACATCGGCGTAGGACCAGGGCGTGATGCTCTCATATACAAATAGGGGGACTTCAGGAAGCACGTATCCTATCAAATTCGTTGTTTAGGGCAATACCAATTTTGTTATTCCCTAATAAGAAAGACACTGGTTGATTGGACTGTATAAAGGCCTGGAGGGTGTAGGAATTCCAAA ATCTTTTTTTGCCCTAACAAGATTAAATACGGTCCCCGCTGCTGTCCAATGGATATTCTTTTTCTAGCTATTGTCAATATATTAGTGGAATT] [-] EMBL CB638393 [ TATTGTACTGAAGATGGTAAAGAAATTGAATCATTCCCTGCAGCCCTTGTTTTTTTGGAGAAAATTAAGGTCAAATATGAGGTTCTACCTGGGTGGGAGGACGACATTTCCTTTGTACGAAACTACAGCGTTCTCCCAGAGACTGTTCGTTTGTACGTGGAGAGGATAAAAGAGCTGGTTGGTATCCCAGTCCATTACATCGGGGTAGGACCAGGGCGTGATGTTTTCATATACAAATAGGGGGACTTCAGGAAGCAGGTATCCTATCAAATTCGTTGTTTAGGGCAATACCAATTTTGTTATTCCCTAATAAGAAAGACACTGGTTGATTGGACTGTATAAAGGCCTGGAGGGTGTAGGAATTCC AA ATTTTTTTTTGCCCTAACAAGATTAAATACGGTCCCCcg ] [-] EMBL CB636898 [ ATCATTCCCTGCAGCCTTTGATTTTTTGGAGAAAATTAAGGTCAAATATGAGGTTCTACCTGGGTGGGAGGACGACATTTCCTCTGTACGAAACTCCAGCGTTCTCCCAGAGACTGTTCGTTTGTACGTGGAGAGGATAGAAGAGCTGGTTGGTATCCCAGTCCATTACATCGGGGTAGGACCAGGGCGTGATGCTTTCATATACAAATAGGGGGACTTCAGGAAGCAAGTATCCTATCAAATTCGTTGTTTAGGGCAATACCAATTTTGTTATTCCCTAATAAGAAAGACACTGGTTGATTGGACTGTATAAAGGCCTGGAGGGTGTAGGAATTCCAAATATCTTTTTTTGCCCTAACAAGATTAAATACGGTCCCCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||