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Oryza sativa
cluster # 10768 cluster # 10768       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10768#0 length = 2367 sequences # 7  
consensus_10768#1 length = 269 sequences # 1  

consensusID : consensus_10768#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2367
fasta sequence
                              [GAAAAGCCACGCGGGTCGCGGCAACCCTAGACCACCAAGAAGGCCGAGGCGGAGGCGAGAGGCGGAACACGAGGAGGCCACCAGAAAATTCCTCCCTCCCCCAGGAGAGGCGAGGCGAAGCGGAGCTCTCCTCCCAAATTCCCCAACCCTCCACCGCCTCCACCGCCACCGCCATGCGCATCCGCCGCTACGCCGCGCGCCTCCTCGCCTCCTCCACCGCCACCGCCCCCTCCTCCCTCCCGCCGCCCCCCGCCGCCTCCGCGGCCTGGTGCCACGCCGCCGCGGACGATTGCGCCATCTGCGACCTCACCCGCTCCGCCTCCCCGCAGGTGGTGGCGCCGGACGCAATCAAGCAGAAGGGGCACATTGCCGGCCGGGCGCTGGAACCCGAGCTCAGGAGCGATCCGCGCGTCGGACTAGCCGAACGAACTCCTGTTCCGGAAGATCAAGGGCGCGATATAGATGACGGTCCTCCCGCGAAAAGATCTCTCACGTTTACTGATGCTGCGGCGAGGCTAGAAGGTTCGGGAAATGTTGGTGCTGGAGTTGCTACTGAACCAGCAGCTAGACTAGGAGCCCCCGTTGCTAATGGAGCTGTTAGTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTGCTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGC-TGAACCAG-AGGTTTTAAAAGGGGCTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGCGTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTCTCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTGCTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAGAACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAGAGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTACATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAAGTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCACCAGAGTTGCCACAGAGCT-GGGAGATACTGGTAGAGTTT-CTGCTT-GTAGTGGAGA-TGGTGACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGAGGTTGCCAATGTGAATGTTGGAAATGCAGGAGAGGCTGTTGCGAGCAAAGTGCAGCCTTTTAGAGACAATGCAGAAAGTGTTGGTGGTTCTATTAATTCAACAGGCAATGGCCATGTTAGCTCCAAAAGTCCAACTGCAGATGAAGCAGCACCACCTGGTGGATGTACTGATACACCCAGTGTTTCATGTTTATCAGACATTGTGGCTAGAAGCATCGGTAAGTCAGGGAGAACAGATATCATATGTTATGTTAGGCGCAGGGGTAAAAGGAAGCTGGAAATGGTGGAGGTAAAGGAAGAAAATGTTGAAATGGATGACAGTGCTATCTGTGATCAATATGATGATAAAGTGGCATCAGAAAGAACTGGTCCTTGCGAGAGTGTGACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGCTTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTGAAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGAACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATTTGAGGCGCCACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGGCTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGACCTTATAAATGCACAACACCTGGGTGCAGCAAGATATACAAGTTTGTTTCGGACTTCACCCGGCATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAGGAGTAAAAATCTTGTACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGATGATTGGTGTTGTTCTAGCGACCTATAGCAGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTAGTTCGGAAATTTTGAATGCGTGTTTCTCAAATATCGTTATACATTCTAAAAATGCTGCTTCATAATAAAAAAAAAAAAAAAA]

[+] EMBL AK068803             [GAAAAGCCACGCGGGTCGCGGCAACCCTAGACCACCAAGAAGGCCGAGGCGGAGGCGAGAGGCGGAACACGAGGAGGCCACCAGAAAATTCCTCCCTCCCCCAGGAGAGGCGAGGCGAAGCGGAGCTCTCCTCCCAAATTCCCCAACCCTCCACCGCCTCCACCGCCACCGCCATGCGCATCCGCCGCTACGCCGCGCGCCTCCTCGCCTCCTCCACCGCCACCGCCCCCTCCTCCCTCCCGCCGCCCCCCGCCGCCTCCGCGGCCTGGTGCCACGCCGCCGCGGACGATTGCGCCATCTGCGACCTCACCCGCTCCGCCTCCCCGCAGGTGGTGGCGCCGGACGCAATCAAGCAGAAGGGGCACATTGCCGGCCGGGCGCTGGAACCCGAGCTCAGGAGCGATCCGCGCGTCGGACTAGCCGAACGAACTCCTGTTCCGGAAGATCAAGGGCGCGATATAGATGACGGTCCTCCCGCGAAAAGATCTCTCACGTTTACTGATGCTGCGGCGAGGCTAGAAGGTTCGGGAAATGTTGGTGCTGGAGTTGCTACTGAACCAGCAGCTAGACTAGGAGCCCCCGTTGCTAATGGAGCTGTTAGTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTGCTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGC TGAACCAG AGGTTTTAAAAGGGGCTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGCGTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTCTCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTGCTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAGAACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAGAGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTACATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAAGTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCACCAGAGTTGCCACAGAGCT GGGAGATACTGGTAGAGTTT CTGCTT GTAGTGGAGA TGGTGACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGAGGTTGCCAATGTGAATGTTGGAAATGCAGGAGAGGCTGTTGCGAGCAAAGTGCAGCCTTTTAGAGACAATGCAGAAAGTGTTGGTGGTTCTATTAATTCAACAGGCAATGGCCATGTTAGCTCCAAAAGTCCAACTGCAGATGAAGCAGCACCACCTGGTGGATGTACTGATACACCCAGTGTTTCATGTTTATCAGACATTGTGGCTAGAAGCATCGGTAAGTCAGGGAGAACAGATATCATATGTTATGTTAGGCGCAGGGGTAAAAGGAAGCTGGAAATGGTGGAGGTAAAGGAAGAAAATGTTGAAATGGATGACAGTGCTATCTGTGATCAATATGATGATAAAGTGGCATCAGAAAGAACTGGTCCTTGCGAGAGTGTGACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGCTTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTGAAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGAACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATCTGAGGCGCCACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGGCTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGACCTTATAAATGCACAACACCTGGGTGCAGCAAGATATACAAGTTTGTTTCGGACTTCACCCGGCATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAGGAGTAAAAATCTTGTACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGATGATTGGTGTTGTTCTAGCGACCTATAGCAGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTAGTTCGGAAATTTTGAATGCGTGTTTCTCAAATATCGTTATACATTCTAAAAAT                             ]
[+] EMBL CB642247             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAGGACCCCCCGTTGCTAATGGAGCTGTTAGTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTGCTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGC TGAACCAG AGGTTTTAAAAGGGGCTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGCGTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTCTCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTGCTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAGAACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAGAGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTACATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAAGTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCACCAGAGTTGCCACAGAGCT GGGAGATACTGGTAGAGTTT CTGCTT GTAGTGGAGA TGGTGACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGAGGTTGCCAATGTGAATGTTGGAAATGCAGGAGAGGCTGTTGCGAGCAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB642208             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TAGGAGCCCCCGTTGCTAATGGAGCTGTTACTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTGCTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGCATGAACCAGCAGGTTTTAAAAGGGGCTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGCGTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTCTCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTGCTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAGAACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAGAGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTACATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAAGTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCACCAGAGTTGCCACAGAGCT GGGAGATACTGGTAGAGTTT CTGCTT GTAGTGGAGA TGGTGACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU030944             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               TGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAGAACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAGAGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTACATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAAGTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCACCAGAGTTGCCACAGAGCTGGGGAGATACTGGTAGAGTTTCCTGCTTGGAAGTGGAAATTGGNGACATTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB642209             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GATGATAAAGTGGCATCAGAAAGAACTGGTCCTTGCGAGAGTGTGACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGCTTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTGAAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGAACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATTTGAGGCGCCACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGGCTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGCCCTTATAAATGCACAACACCTGGGTGCAGCAAGATATACAAGTTTGTTTCGGACTTCACCCGGCATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAGGAGTAAAAATCTTGTACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGATGATTGGTGTTGTTCTAGCGACCTATAGCAGG GGGC TGTTACTTTGTTGAGAAAATTTTACAATCTGTAGTTCGGAAATTTTGAATGCGTGTTTGTCCTTTAGGGTTA ACA                                       ]
[-] EMBL CA763403             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGCTTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTGAAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGAACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATTTGAGGCGCCACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGGCTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGACCTTATAAATGCCCAACACCTGGGTGCAGCAGGATATACAAGTTTGTTTCGGACTTCACCCGGCATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAGGAGTAAAAATCTTGTACTTGCTACGGTAGATGTTTTTTTTATTTATTTGCGGGATGATCGGTGTTGTTCTAGCGACCTATAGCAGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTAGTTCGGAAATTTTGAATGCGTGTTTCTCAAATATCGTTATACATTCTAAAAATGCTGCTTCATAATAAAAAAAAAAAAAAAA]
[-] EMBL CB642248             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GGCGCCTCCAGAGCATTCTCAATGATGATATGCCATTCAAGTGTCCATGGGAGGGCTGCAGTATGGCTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGCCCTTATAAATGCACAACGCGTGGGTGCAGCAAGATATACAAGTTTGTTTCGGGCTTCTCCCGCCATAAGAGGAGGTGCCACCCTCAGAGGTATAAGCTTGTGTGATGCTTCAGATTCAGGATAGGAGTAAAAATCTGGTCCTTGTTACTCTAGAGGTTTTTTTTATTTATCTGCTGGATGATTGGTGTTGTTCTAGCGcc                                                                                                                                   ]


>consensus_10768#0 GAAAAGCCACGCGGGTCGCGGCAACCCTAGACCACCAAGAAGGCCGAGGCGGAGGCGAGA GGCGGAACACGAGGAGGCCACCAGAAAATTCCTCCCTCCCCCAGGAGAGGCGAGGCGAAG CGGAGCTCTCCTCCCAAATTCCCCAACCCTCCACCGCCTCCACCGCCACCGCCATGCGCA TCCGCCGCTACGCCGCGCGCCTCCTCGCCTCCTCCACCGCCACCGCCCCCTCCTCCCTCC CGCCGCCCCCCGCCGCCTCCGCGGCCTGGTGCCACGCCGCCGCGGACGATTGCGCCATCT GCGACCTCACCCGCTCCGCCTCCCCGCAGGTGGTGGCGCCGGACGCAATCAAGCAGAAGG GGCACATTGCCGGCCGGGCGCTGGAACCCGAGCTCAGGAGCGATCCGCGCGTCGGACTAG CCGAACGAACTCCTGTTCCGGAAGATCAAGGGCGCGATATAGATGACGGTCCTCCCGCGA AAAGATCTCTCACGTTTACTGATGCTGCGGCGAGGCTAGAAGGTTCGGGAAATGTTGGTG CTGGAGTTGCTACTGAACCAGCAGCTAGACTAGGAGCCCCCGTTGCTAATGGAGCTGTTA GTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTG CTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGCTGAACCAGAGGTTTTAAAAGGGG CTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGC GTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTC TCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTG CTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAG AACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAG AGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTAC ATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAA GTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCA CCAGAGTTGCCACAGAGCTGGGAGATACTGGTAGAGTTTCTGCTTGTAGTGGAGATGGTG ACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGAGGTTGCCAATGTGAATG TTGGAAATGCAGGAGAGGCTGTTGCGAGCAAAGTGCAGCCTTTTAGAGACAATGCAGAAA GTGTTGGTGGTTCTATTAATTCAACAGGCAATGGCCATGTTAGCTCCAAAAGTCCAACTG CAGATGAAGCAGCACCACCTGGTGGATGTACTGATACACCCAGTGTTTCATGTTTATCAG ACATTGTGGCTAGAAGCATCGGTAAGTCAGGGAGAACAGATATCATATGTTATGTTAGGC GCAGGGGTAAAAGGAAGCTGGAAATGGTGGAGGTAAAGGAAGAAAATGTTGAAATGGATG ACAGTGCTATCTGTGATCAATATGATGATAAAGTGGCATCAGAAAGAACTGGTCCTTGCG AGAGTGTGACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGC TTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTG AAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGA ACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATTTGAGGCGCC ACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGG CTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGACCTT ATAAATGCACAACACCTGGGTGCAGCAAGATATACAAGTTTGTTTCGGACTTCACCCGGC ATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAG GAGTAAAAATCTTGTACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGATGATTG GTGTTGTTCTAGCGACCTATAGCAGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAAT CTGTAGTTCGGAAATTTTGAATGCGTGTTTCTCAAATATCGTTATACATTCTAAAAATGC TGCTTCATAATAAAAAAAAAAAAAAAA



consensusID : consensus_10768#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 269
fasta sequence
                              [TACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGNTGATTGGTGTTGTTCTAGCGNCCTNTNGCCGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTNGTTCGGAAATTTTNAATGCGTGTTTCTCNAATATCGTTNTACATTNTAAAAATGCTGCTTCATAATATCCGAGATGTTTTTCCGGTGCNGTNTNTNTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU095176             [TACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGNTGATTGGTGTTGTTCTAGCGNCCTNTNGCCGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTNGTTCGGAAATTTTNAATGCGTGTTTCTCNAATATCGTTNTACATTNTAAAAATGCTGCTTCATAATATCCGAGATGTTTTTCCGGTGCNGTNTNTNTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10768#1 TACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGNTGATTGGTGTTGTTCTAGCG NCCTNTNGCCGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAATCTGTNGTTCGGAAA TTTTNAATGCGTGTTTCTCNAATATCGTTNTACATTNTAAAAATGCTGCTTCATAATATC CGAGATGTTTTTCCGGTGCNGTNTNTNTNTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10768#0      GAAAAGCCACGCGGGTCGCGGCAACCCTAGACCACCAAGAAGGCCGAGGCGGAGGCGAGA 60
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GGCGGAACACGAGGAGGCCACCAGAAAATTCCTCCCTCCCCCAGGAGAGGCGAGGCGAAG 120
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CGGAGCTCTCCTCCCAAATTCCCCAACCCTCCACCGCCTCCACCGCCACCGCCATGCGCA 180
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      TCCGCCGCTACGCCGCGCGCCTCCTCGCCTCCTCCACCGCCACCGCCCCCTCCTCCCTCC 240
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CGCCGCCCCCCGCCGCCTCCGCGGCCTGGTGCCACGCCGCCGCGGACGATTGCGCCATCT 300
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GCGACCTCACCCGCTCCGCCTCCCCGCAGGTGGTGGCGCCGGACGCAATCAAGCAGAAGG 360
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GGCACATTGCCGGCCGGGCGCTGGAACCCGAGCTCAGGAGCGATCCGCGCGTCGGACTAG 420
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CCGAACGAACTCCTGTTCCGGAAGATCAAGGGCGCGATATAGATGACGGTCCTCCCGCGA 480
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      AAAGATCTCTCACGTTTACTGATGCTGCGGCGAGGCTAGAAGGTTCGGGAAATGTTGGTG 540
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CTGGAGTTGCTACTGAACCAGCAGCTAGACTAGGAGCCCCCGTTGCTAATGGAGCTGTTA 600
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GTGGGCAGGAGGATAGAGCAGCAACTTGTCTTGCGGATGAATCTGCTGCGGAGCTGATTG 660
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CTACCGGGGTAACTTCTCTCGTTACCGGAGCAACCGCTGAACCAGAGGTTTTAAAAGGGG 720
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CTTCATTTGCTAATACAAATGTTACCGAGCCAAGAGTTTCGGAGAGAGTTCCTCTTGTGC 780
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GTGAAGCTGCAACTGAGCCAGAAGCTGAAGTCTCTATGCGAGAAGTTACAGAAGGAGCTC 840
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      TCCCTGATGGTGAAGGTGCTGCAAAGTTGGAAATTACAGGGGGGCTTTCTCGAGAATCTG 900
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CTGACAAAATGGAAGTTACAAAGGGAATTTCTCTTGTTACTGAAGCTTCTGCTGATTCAG 960
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      AACTTGCACAGAGAGTTCCTACTGAACCAGGAGTTGAACTCTCTCTGCCGGAAGTTACAG 1020
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      AGAGAGTTCCTGTTGTGACTGAAGATTTCACTGAGCTAGGAGATACATTCAGTGGCCTAC 1080
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ATATTACAGGGTTCGCTTCCCTGGATAATGAAGGTTCCGTGGAACAAGAAGTCACAGGAA 1140
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GTGGTTCTCTTGTAAATGAAGCTACAGAGATGGAAGTTAAGGAAGGAACCTGTATCTTCA 1200
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CCAGAGTTGCCACAGAGCTGGGAGATACTGGTAGAGTTTCTGCTTGTAGTGGAGATGGTG 1260
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ACATTGCTTTAGATGAGCCACGACCTCCTGATTGTGTTTCGGAGGTTGCCAATGTGAATG 1320
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      TTGGAAATGCAGGAGAGGCTGTTGCGAGCAAAGTGCAGCCTTTTAGAGACAATGCAGAAA 1380
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GTGTTGGTGGTTCTATTAATTCAACAGGCAATGGCCATGTTAGCTCCAAAAGTCCAACTG 1440
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CAGATGAAGCAGCACCACCTGGTGGATGTACTGATACACCCAGTGTTTCATGTTTATCAG 1500
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ACATTGTGGCTAGAAGCATCGGTAAGTCAGGGAGAACAGATATCATATGTTATGTTAGGC 1560
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GCAGGGGTAAAAGGAAGCTGGAAATGGTGGAGGTAAAGGAAGAAAATGTTGAAATGGATG 1620
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ACAGTGCTATCTGTGATCAATATGATGATAAAGTGGCATCAGAAAGAACTGGTCCTTGCG 1680
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      AGAGTGTGACGTCAACTGCTGTATCTGTAGAGATTAAAATTGCTGACATAAAGAGAGAGC 1740
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      TTGAAGATAATTCAACTGCTAGCAAGGGTAAAAAGAAGAGGGCCAAAAGGTTTCAATGTG 1800
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      AAATAGATTATTGCCGCATGACATTCAAGAACCGAGCTGAGCTTTCTGTTCATAAAAAGA 1860
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ACACATGCACGGTCAAGTCATGCGGCAGACATTTCAGATCCCACAAGTATTTGAGGCGCC 1920
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ACCAGAGCATTCACAATGATGATATGCCATACAAGTGTCCATGGGAGGGTTGCAGTATGG 1980
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      CTTTCAAGTGGTCATGGGATCGGGGTGAGCATTTCCAAGTCCATGCTGGCAAAAGACCTT 2040
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ATAAATGCACAACACCTGGGTGCAGCAAGATATACAAGTTTGTTTCGGACTTCACCCGGC 2100
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      ATAAGAGGAGGTGCAAACCTCAGAGGTAAAAGCTTGTGTGATACTACAGATTTAGGATAG 2160
consensus_10768#1      ------------------------------------------------------------
                                                                                   

consensus_10768#0      GAGTAAAAATCTTGTACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGATGATTG 2220
consensus_10768#1      --------------TACTTGCTACTGTAGATGTTTTTTTTATTTATTTGCTGGNTGATTG 46
                                     *************************************** ******

consensus_10768#0      GTGTTGTTCTAGCGACCTATAGCAGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAAT 2280
consensus_10768#1      GTGTTGTTCTAGCGNCCTNTNGCCGGATTGCTTGTTACTTTGTTGAGAAAATTTTACAAT 106
                       ************** *** * ** ************************************

consensus_10768#0      CTGTAGTTCGGAAATTTTGAATGCGTGTTTCTCAAATATCGTTATACATTCTAAAAATGC 2340
consensus_10768#1      CTGTNGTTCGGAAATTTTNAATGCGTGTTTCTCNAATATCGTTNTACATTNTAAAAATGC 166
                       **** ************* ************** ********* ****** *********

consensus_10768#0      TGCTTCATAATAAAAAAAAAAAAAAAA--------------------------------- 2367
consensus_10768#1      TGCTTCATAATATCCGAGATGTTTTTCCGGTGCNGTNTNTNTNTAAAAAAAAAAAAAAAA 226
                       ************    * *                                         

consensus_10768#0      -------------------------------------------
consensus_10768#1      AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 269
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)