These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10772#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2838 fasta sequence [GTTTATTAAGATGAGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCACACAGCTAACATGAGTTACACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTGTTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGGATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTCATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAACTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCC-TT-AAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTAT-GGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACACCCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCTTTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATCAGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAGGTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTTTCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAGAGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAGAAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAACATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATCTCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCGGCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCCGCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTGTGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCCACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGACGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTTTGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATATGAAAAGTAGCAAAGGGGTGATC] [+] EMBL AK119435 [GTTTATTAAGATGAGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCACACAGCTAACATGAGTTACACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTGTTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGGATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTCATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAACTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCC TT AAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTAT GGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACACCCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCTTTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATCAGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAGGTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTTTCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAGAGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAGAAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAACATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATCTCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCGGCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCCGCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTGTGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCCACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGACGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTTTGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATATGAAAAGTAGCAAAGGGGTGATC] [-] EMBL CB630743 [ TGTCCCGTGGCTCTGCTGCAT CGCCCATTGAAACTTGGTTCTCTTGTAGGCTTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAAACTTCAGTACCCGCCCTGTCCGGTGTTCATCATTCACGGATAAGTTGGAAGGCACGGGTAAGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAGCTCCACCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAGAGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCCCAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACCATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACGCGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAATGCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGATTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCGCCAAGTCTGCAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTATGGGCGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATAGAGCGGCTACGGTGATTTGCTAATGT ] [+] EMBL D42713 [ GCAAAATTTACGCCAAACATGGTAGATGCAGTCAT CTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTAGATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCCATGGATAACCAGCCGATTCAGTATCCTNNCAGCTCCGCCGCC ] [-] EMBL CB638048 [ CCGCCCGCCGGCCAATGCCCGTAGTCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGTACGAGAGCGGCGCTAGGAGGAGAAGCACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGCTTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGATCATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCAACGCGCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGATGCTCCGCGCAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTCACGAGGGGCGGGCGAAGCTAGCGTTTGTGGTTTAGA ] consensusID : consensus_10772#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 696 fasta sequence [ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTTTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762203 [ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTTTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10772#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 662 fasta sequence [GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGGCATG] [+] EMBL CA767222 [GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCATAGCCTGGAAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTACCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAAAGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTCAACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGGCATG] consensusID : consensus_10772#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 466 fasta sequence [AGGATGCCTACCAGAGCAATGCAGGTTCCACATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATAT] [+] EMBL CB629779 [AGGATGCCTACCAGAGCAATGCAGGTTCCACATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCGGGTCGTGTGGTTGTGTAAATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTCTTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTAGAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAGTGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCTTGTCACCCCGTTCTGAGTTTTGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCTTATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGGCATGCAAAATAGATATAT] consensusID : consensus_10772#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 250 fasta sequence [AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTATCATATCTAATTAGACATTAGATCACTCANAGTGATGCGACACCATCTTCATCTCATCAAAGGATCGTCATGATANCAGCCGTTAGTATCTNNAGCTCGCGCCGACGAGAGGGGATCTCTAGAGTGCCTCTGGCCTCGGACGGTGCATCAGTTTCCTTAGTGGTGATTATTGCTATTGCGTATATGGCATAGCTGTTCT] [+] EMBL D42711 [AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTATCATATCTAATTAGACATTAGATCACTCANAGTGATGCGACACCATCTTCATCTCATCAAAGGATCGTCATGATANCAGCCGTTAGTATCTNNAGCTCGCGCCGACGAGAGGGGATCTCTAGAGTGCCTCTGGCCTCGGACGGTGCATCAGTTTCCTTAGTGGTGATTATTGCTATTGCGTATATGGCATAGCTGTTCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10772#1 ----------ACTGTGTCTAGCTACTGGAATTGGGGAAGAGATGGTAGTCAATAGCCTGG 50 consensus_10772#2 GGNNTCGCNAGCTTGATNNGACGNGACAGGGGGGGGAAGAGATGGTNGTCA-TAGCCTGG 59 consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ------------------------------------------------------------ consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 AAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTA 110 consensus_10772#2 AAGAATATGAAGAAAGGGCAGTCTCTCTAGCAGAAAATCCATTGAAACTCGAAGCTCTTA 119 consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ------------------------------------------------------------ consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 CCAACAAGCTCAAGGCTGTTAGGATGACCTGTCCTTTGTNTGATACAGCTCGATGGGTAA 170 consensus_10772#2 CCAACAAGCTCAAGGCTGTTAGGATGGCCTGTCCTTTGTTTGATACAGCTCGATGGGTAA 179 consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ------------------------------------------------------------ consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 AGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTC 230 consensus_10772#2 AGAATCTGGAGAGGGCATATTTACATATGTGGAACCTGCATTGCTCTGGTAGGCATCCTC 239 consensus_10772#3 ------------------------------AGGATGCCTACCAGAGCAATGCAGGTTCCA 30 consensus_10772#0 ------------------------------------------------------------ consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 AACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATAAGCG 290 consensus_10772#2 AACATTTTAAGGTGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCG 299 consensus_10772#3 CATATGTAAATATGCTAGAAGATGATGCACAATTTCCATTTTGAGAGATAAGAATCAGCG 90 consensus_10772#0 -GTTTATTAAGATG--AGTTAACTAGGCAGATCTCTTGCTGTTTCATGTGGCTTCTACCA 57 consensus_10772#4 ---------AAATTACGCANACAGGTAGATGCAGTCATCTGTATGCATCTNACATCAGTA 51 * * * * * * consensus_10772#1 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 349 consensus_10772#2 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 358 consensus_10772#3 GGTCGTGTGGTTGTGTAA-ATATTACGAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 149 consensus_10772#0 CACAGCTAACATGAGTTA-CACCCTGCAGAGAGAGAGGTAACATAAGCCTTTTCACCTTC 116 consensus_10772#4 TCATATCTAATTAGACATTAGATCACTC-ANAGTGATGCGACACCA---TCTTCATCTCA 107 * * ** ** * *** * * **** ** consensus_10772#1 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 409 consensus_10772#2 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 418 consensus_10772#3 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 209 consensus_10772#0 TTAACGCACAAAAACTGAGAAAGAGTTGTCCGCGTCCAAATCTTGGGGGAGAAACTAGTA 176 consensus_10772#4 TCAAAGGATCGTCAT--GATANCAGCCGTTAGTATCTNNAGCTCGCGCCG---ACGAGAG 162 * ** * * * * ** ** * ** * ** * * ** ** consensus_10772#1 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 469 consensus_10772#2 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 478 consensus_10772#3 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 269 consensus_10772#0 GAAATCTTGGGGGGAGAAACTATACTTGTAGGACTTTCTATAGAAAACTGTTGCGTCAAG 236 consensus_10772#4 GGGATCTCTAG---AGTGCCTCTGGCC-TCGGACGGTGCATCAGTTTCCTTAGTGGTGAT 218 * **** * ** ** * * **** * ** * * * * * consensus_10772#1 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTTTGAGTTT 528 consensus_10772#2 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTCCTTGTCACCCCGTTCTGAGTTT 538 consensus_10772#3 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTCTGAGTTT 328 consensus_10772#0 TGTTAAGACTCCCTAGGGGATCATATTTCTTCCAGTTC-TTGTCACCCCGTTCTGAGTTT 295 consensus_10772#4 TATTGCTATTGCGTATATGG-CATAGCTGTTCT--------------------------- 250 * ** * * * ** * **** * *** consensus_10772#1 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 588 consensus_10772#2 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 598 consensus_10772#3 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 388 consensus_10772#0 TGCAGAGTATTCTTTTCATAGTGAACATTAGACAAGTAAATCAGAGGGTTGATTCTTTCT 355 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGG 648 consensus_10772#2 TATCAATATTAGGAGTGNATTGTTGGACATTTCTTGAACTGATCGACAGNCAAAAAAAGG 658 consensus_10772#3 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAACTGATCGACAGTCAAAAAAAGG 448 consensus_10772#0 TATCAATATTAGGAGTGGATTGTTGGACATTTCTTGAATTGATCGACAGTCAAAAAAAGG 415 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 CATGCAAAATAGATATATACTTTTTTTTTAAAAAAAAAAAAAAAAAAA------------ 696 consensus_10772#2 CATG-------------------------------------------------------- 662 consensus_10772#3 CATGCAAAATAGATATAT------------------------------------------ 466 consensus_10772#0 CATGCAAAATAGATATATACTTTTTTTTTTCTTCTGCAACATGTATGCGCGATCAGGTTG 475 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TTGGTCTGGTCTGTCATCGTGATAAGTGGACCTGAAGATTGGTGGCAGTTCAGGTCGTGG 535 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ATGGTTTGTTGCTTTCTTCCTTACAAGTACTAATTACATTTGGAGATCTATGCAGATTTC 595 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ATGCGCAAGCTGGAACGCTATGCCTGGGCGCACCTTACTGCAGGAATTGCTGTGACTGAA 655 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CTTTTGATGATGTCCCGTGGCTCTGCTGCATCCGCCCTTAAACTTGGTTCTCTTGTAGGC 715 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TTAACTGTTTTTGCAGGTTGTCGTTCTCTTCTCTGAAATTGTTGGTCTCGACAGTTTCAA 775 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ACTTCAGTACCCGCCCTGTCCGGTGTTCGTCATTCACGGATAAGTTGGAAGGCACGGGTA 835 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 AGATATATTGGCACGGTCCATGGAAACGTTGAACAGTGCACAAGGCTACTGCTGTTTGAG 895 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CTCCTCCCATTCCGCCAGGATCTCCTGAAATGTGTTTCAGGGGGAAAATGAACCGGACAG 955 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 AGTGGCACCATGCAGTCATTTAGCACCTGCCAGTGCGATGACTTCACTACCAGAAGTGCC 1015 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CAAGTAGCTAATCTTAAGGTAATCTGTTTCTGGTGCTCGGATAAACGGACACACCAGACC 1075 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ATAAGCCAGGTAAATACCATCGAATCACATCGTTAACGGCGGCGGCTACAGAACCATACG 1135 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CGCAGTTTGGTGAGTTTGGTGTGGTTGATGACGTGGCTGGTCCGATGATTGGTCCAAAAT 1195 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GCCAGCATATACCGTCAATGATGATATACCGCCAAAATCAGGCAGGAAACGAGCGATCGA 1255 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TTCTTTGCCCGCTTCATTACTCTCTTCCCAAGGTACGCATCCGTCAATGATGATATACCG 1315 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CCAAGTCTACAAAACTGAGGGCAATTGTTTCATCGTCGCGGTTATTAACCTTAGCTATGG 1375 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CGAATTACGGATTAGTGGGATTCGATAAAATCATAAGCAATGAATTTTCAGACGATAATA 1435 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GAGCGGCTACGGTGATTTGCTAATGTCAAATTTGAGTCTTAATTAGCTCTTTTAGAACAC 1495 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CCAAAGTTTTTTCCACAAAAATCCTTCAACATTTATCTGGTACCGTTCCAGGAGGAGCCT 1555 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TTTGGTTAGAGTGGCTTCATCGACCTTAGCTCACGCTAGGGTTTAGCTGACGACACGATC 1615 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 AGTTTGTACTGAACTGGATGCACTTGATAGTGGTAATGGATGTGTGGTTTTAATTTTAAG 1675 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GTCCTGTGTTTAATTCCTAACATATTTACATTTTTTTCTTAAAAAATGTTCACAAGTTTT 1735 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TCTTTAAAAAGTTTGGAGGGACATATCTTCCTCCGAATTTCTCTTTTTTAGTTTGTACAG 1795 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 AGCTATAGGTGTCATTGAGGAACAGGATTTACAGATGCTACAGAAAGAGAGAAAACTGAG 1855 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 AAGCATAAGCTACCATCTTACGCAAGTTGGACTCTGCAGCAAGCAAAATTTACGCCAAAC 1915 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ATGGTAGATGCAGTCATGCTGTATGCATCTTACATCAGTATCATATCTAATTAGACATTA 1975 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GATCACCTCAAAGATGATGACGCACACCCATCTTCCATCTCCATCAAAAGGCATGCGTCC 2035 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ATGGATAACCAGCCGATTCAGTATCCTGGCAGCTCCGCCGCCGGCACGAAGGAGACCATC 2095 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TCGCGGGACGGCACCCAGGCCTTGACGACGACGACGGCGTCGAACACCAGCTCGTCGTCG 2155 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GCCTCCTGGGCAGCGATGCGGAGGTAGTACTTGATCCCGGAGACCACCTGCGTCTGCGCC 2215 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GCCACGACCCTGGAGAAGACCAGCCCGCGGCCGCGGGTGGCCGACCCCCCTCGCCGGTTG 2275 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TGTTCCACGACGCAGAAGAGCCCGAGCTCCTGCACCTCCCTGTTCCCCTCCACGTCCTCC 2335 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ACGTCCGTCCTCCCGCCGACCTTCCTCCCGCGGCCGCCGCCCGCCGGCCACTGCCCGTCG 2395 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TCGTCGGCGGCGGCGGCGGCGGCGAGGCGCGCGGACGAGAGCGGCGCGAGGAGGAGAAGC 2455 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 ACCAGCACGAGCGGGGCGACGGCGTAATACAGCTTGGAGGCCATAGTTTTGTACTTTCGC 2515 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TTGCTAGCTAATTATATGTTTGGATTTCGCAGTTTTGCACAGATGTACAGAGGCGAGAGA 2575 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CGATATAGGTAGGGTGGTGTGTACTGCAGTGCAGGTGTTCGCGTGACCACGTAGCGACGC 2635 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 GCGCGTGTGTGCATGCGGCGCCACGGCGCGGCATCACGTGGACCCTGCAGCTGCTCCGCG 2695 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 CAACAGCAAGCTCGGCCTTTGTCCGGCGTTGCGTGACGAGGGGCGGGCGAAGCTAGCGTT 2755 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ------------------------------------------------------------ consensus_10772#2 ------------------------------------------------------------ consensus_10772#3 ------------------------------------------------------------ consensus_10772#0 TGTGGACTAGAAAAAAGGATGGAGTTTGTTCCATCTTTTTGTATGCATGTTGCATGGATA 2815 consensus_10772#4 ------------------------------------------------------------ consensus_10772#1 ----------------------- consensus_10772#2 ----------------------- consensus_10772#3 ----------------------- consensus_10772#0 TGAAAAGTAGCAAAGGGGTGATC 2838 consensus_10772#4 ----------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||