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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10779#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2713 fasta sequence
[TCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCCCAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCAACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTTGGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCGTCGAGCAGCCGCAGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGCTCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGTTCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGGATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTCGTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACCGCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGAGGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAAGAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGACCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCAGGATGAGATATGTAAATCACGGTTAACAAGTATAAAGCGGGAGGAAGAACAGTACTTGAGAGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAGAGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTTAAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTACAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCAAAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAACATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGAATATTGCAGTGGCAAAGATCTTGATGCAGTCCTTAAAGCAACACCGATTCTTCCAGAAAAGGAAGCGAGAATCATAATTGTCCAAATATTTCAAGGCCTAGTTTATCTTAACAAGAGAACTCAAAAGATCATTCACTATGATCTCAAACCAGGCAATGTTCTCTTCGATGAGGTTGGTGTTGCAAAAGTTACAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAGGGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTTGATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATGTTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATACTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTATCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCAGACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGAAAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCCCGGAACATATTTATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATCCCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGAACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAGATTAGGCGTTAATTTTTGAACGGGCCATGCTCTTTTGCTACTTCTTG]
[+] EMBL AK111604 [TCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCCCAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCAACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTTGGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCGTCGAGCAGCCGCAGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGCTCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGTTCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGGATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTCGTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACCGCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGAGGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAAGAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGATCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCAGGATGAGATATGTAAATCACGGTTAACAAGTATAAAGCGGGAGGAAGAACAGTACTTGAGAGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAGAGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTTAAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTACAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCAAAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAACATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGAATATTGCAGTGGCAAAGATCTTGATGCAGTCCTTAAAGCAACACCGATTCTTCCAGAAAAGGAAGCGAGAATCATAATTGTCCAAATATTTCAAGGCCTAGTTTATCTTAACAAGAGAACTCAAAAGATCATTCACTATGATCTCAAACCAGGCAATGTTCTCTTCGATGAGGTTGGTGTTGCAAAAGTTACAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAGGGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTTGATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATGTTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATACTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTATCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCAGACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGAAAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCACGGAACATATTTATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATCCCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGAACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAG ]
[+] EMBL CB635500 [ AGAACAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGACCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCAGGATGAG ]
[+] EMBL CB627908 [ GAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGACCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGANGAAGAT ]
[+] EMBL CB627949 [ gaaccctTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGACCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAAGAAGATGTCCTGTTGCAGGATG ]
[-] EMBL CB668709 [ TTCACTATGATCTCAAACCAGGCAATGTTCTCTTCGATGAGGTTGGTGTTGCAAAAGTTACAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAGGGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTTGATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATGTTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATACTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTATCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCAGACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGAAAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCCCGGAACATATTTATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATCCCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGAACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAGATTAGGCGTTAATTTTTGAACGGGCCATGCTCTTTTGCTACTTCTTG]
[-] EMBL CB627909 [ ACCAGGCAATGTCTTCTTCGATGAGGTTGGTGTTGCAAAAGTTACAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAGGGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTTGATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATGTTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATACTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTATCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCAGACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGAAAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCCCGGAACATATTTATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATCCCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGAACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAGATTAGGCGTTAATTTTTGAACGGGCCATGCTCTTGTGCTACTTCTTG]
[-] EMBL CB627950 [ CAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAGGGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTTGATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATGTTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATACTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTATCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCAGACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGAAAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCCCGGAACATATTTATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATCCCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGAACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAGATTAGGCGTTAATTTTTGAACGGGCCATGCTCTTTTGCTACTTCTTG]
consensusID : consensus_10779#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2074 fasta sequence
[AGAACAGGAAGAGCGGAGAGAGGAAAAGGAGAGGAGAGAGATGCCTGCGCCTGTGTAAAATCCTGTGAATTCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCCCAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCAACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTTGGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCGTCGAGCAGCCGCGGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGCTCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGTTCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGGATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTCGTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACCGCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGAGGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAAGAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGATCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCAGGATGAGATATGTAAATCACGGTTAACAAGTATAAAGTGGGAGGAAGAACAGTACTTGAGAGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAGAGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTTAAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTACAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCAAAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAACATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGAATATTGCAGTGGTACAACAAATTTATTTTCGCAACGACCTTCCAAATTTCTTTGACATGACAATGTAGATCGTGCGGCCTCTTTTATAAATATCTCCCATTGGCTTCATTGTATAGATAAGGCTGCATGGGTGTTGTTTTTATGCCAGATATAT]
[+] EMBL AK111770 [AGAACAGGAAGAGCGGAGAGAGGAAAAGGAGAGGAGAGAGATGCCTGCGCCTGTGTAAAATCCTGTGAATTCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCCCAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCAACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTTGGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCGTCGAGCAGCCGCGGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGCTCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGTTCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGGATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTCGTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACCGCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGAGGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAAGAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTTTGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCATAGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGGGCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGCAAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAATGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTTGGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAGGCTAGCGAAGGAATTGAAGGATCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATTGAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGATTCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGTCATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATCTCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATCCGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCAGGATGAGATATGTAAATCACGGTTAACAAGTATAAAGTGGGAGGAAGAACAGTACTTGAGAGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAGAGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTTAAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTACAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCAAAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAACATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGAATATTGCAGTGGTACAACAAATTTATTTTCGCAACGACCTTCCAAATTTCTTTGACATGACAATGTAGATCGTGCGGCCTCTTTTATAAATATCTCCCATTGGCTTCATTGTATAGATAAGGCTGCATGGGTGTTGTTTTTATGCCAGATATAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10779#0 ------------------------------------------------------------
consensus_10779#1 AGAACAGGAAGAGCGGAGAGAGGAAAAGGAGAGGAGAGAGATGCCTGCGCCTGTGTAAAA 60
consensus_10779#0 ----------TCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCC 50
consensus_10779#1 TCCTGTGAATTCCAACTCGCCTCCGAATCCTGCGTCCTCTGGTCGGCGGCGCCGCCGCCC 120
**************************************************
consensus_10779#0 CAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCA 110
consensus_10779#1 CAGGGCCACCACCTCGCCGCCGGTAAACCCTAGCCGTCGCCGCACGCGGGGGAGGAGTCA 180
************************************************************
consensus_10779#0 ACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTT 170
consensus_10779#1 ACAACAGGCGGGAGGAGGGGAGGAGGCGGAGGCAGCGACTGCCCGCCGCGGCTCCGTTTT 240
************************************************************
consensus_10779#0 GGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCG 230
consensus_10779#1 GGTCGGTCTCATTCGCTCGTTCCTCCGCCCGAGGCGGCGCCGCCGCCCATCGCCTGTTCG 300
************************************************************
consensus_10779#0 TCGAGCAGCCGCAGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGC 290
consensus_10779#1 TCGAGCAGCCGCGGGTAGATCCATCCGGTGGTTCGCGTGGCCGCGTTGAGGAGGGTGTGC 360
************ ***********************************************
consensus_10779#0 TCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGT 350
consensus_10779#1 TCGGGGGGAGCGGGGGCGTAGTGAGAGTTGGCGCGTGCGTGCGGCGGTTGGTTTGCTTGT 420
************************************************************
consensus_10779#0 TCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGG 410
consensus_10779#1 TCTGGAAGCTTCGTGGGCGGCCGATCCGGTTTGGGTGCAATCAGCGGCGGCAATGTCGGG 480
************************************************************
consensus_10779#0 ATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTC 470
consensus_10779#1 ATCGTCGGCGGCGGGGGAGGATATAGTGCAGCACCTCTCGTCTAATTCCAACCCGTCCTC 540
************************************************************
consensus_10779#0 GTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACC 530
consensus_10779#1 GTCCAAGCTCGCCAAGCTGGAGGCACGGATGGCTGGCAAGGCCGCTCCGGTGCCATCACC 600
************************************************************
consensus_10779#0 GCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGA 590
consensus_10779#1 GCCGCCGCCGCACCATCTGGTGGTTCCTTCTGCCCCCGCCACCACGTTCATGGACCAGGA 660
************************************************************
consensus_10779#0 GGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAA 650
consensus_10779#1 GGAGCTGCCCGAGTCCTCCTCTTCCGACGATGATAATGGCGAGGAGTTCTTGATACAGAA 720
************************************************************
consensus_10779#0 GAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTT 710
consensus_10779#1 GAACATACTGAAGCGCCCGAGATCGCCAGATGGTGATCACGGCCTAGCTGTTGGAAATTT 780
************************************************************
consensus_10779#0 TGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCAT 770
consensus_10779#1 TGAGGGATCAGCTAATGAGGCGGTAAAGCATTCAGAAGTCATGGACACACGGCCATCCAT 840
************************************************************
consensus_10779#0 AGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGG 830
consensus_10779#1 AGACATCTCAAACAGAAAAAAGCAAGGCCGTGGAAGGGGGCGCGGTGGAGCAGGCCGAGG 900
************************************************************
consensus_10779#0 GCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGC 890
consensus_10779#1 GCGTGGTTCAAAAACTGTAGATCAAACAAGAGCAACTTCAACTTCATCTGCTGTTGTAGC 960
************************************************************
consensus_10779#0 AAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAA 950
consensus_10779#1 AAATGGTCGACATGATATTTTAACCAACATGGAATCCCGATCCAGTGCTGTGCTTGGCAA 1020
************************************************************
consensus_10779#0 TGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTT 1010
consensus_10779#1 TGATGATAAGGCTGCCTTACAGGAAGAGTTGTCATTGCTGCGTGGTAAAGTTGCTATTTT 1080
************************************************************
consensus_10779#0 GGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAG 1070
consensus_10779#1 GGAAGAAGAGCTTTCTAAATCGCGTCAAGAGTCCACGGAATACCGTCAACTTAGTGATAG 1140
************************************************************
consensus_10779#0 GCTAGCGAAGGAATTGAAGGACCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATT 1130
consensus_10779#1 GCTAGCGAAGGAATTGAAGGATCTCAAAGAACAAGATCAACAAAAGAAATCAAAGCAATT 1200
********************* **************************************
consensus_10779#0 GAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGAT 1190
consensus_10779#1 GAAGGTTCTATCTGATCTGCTGATAGCTGTGTCAAAAGCAGAGCGGCAAGAAGCACGGAT 1260
************************************************************
consensus_10779#0 TCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGT 1250
consensus_10779#1 TCGAATAAAGCAGGAATCTTTCCGACTTGGTAACGTTGGTGTTATGAGAGCTGGAACTGT 1320
************************************************************
consensus_10779#0 CATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATC 1310
consensus_10779#1 CATATCTGAAACATGGGAGGATGGCCAGGCAATAAAGGATCTTAATTCTCACCTTAAATC 1380
************************************************************
consensus_10779#0 TCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATC 1370
consensus_10779#1 TCTGCTGGAGACTAAAGAAACTATCGAGAGACATAGAAAATCACTAAAGAAAAGACAATC 1440
************************************************************
consensus_10779#0 CGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCA 1430
consensus_10779#1 CGATAAGGGTGATGGCAGTGATGCTGAAACTAGCATGTCTGAGGAAGATGTCCTGTTGCA 1500
************************************************************
consensus_10779#0 GGATGAGATATGTAAATCACGGTTAACAAGTATAAAGCGGGAGGAAGAACAGTACTTGAG 1490
consensus_10779#1 GGATGAGATATGTAAATCACGGTTAACAAGTATAAAGTGGGAGGAAGAACAGTACTTGAG 1560
************************************* **********************
consensus_10779#0 AGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAG 1550
consensus_10779#1 AGAAAGAGATCGGTATGAATTGGAAAAGGGTAGGCTTATACGTGAAATGAAGCGTCTCAG 1620
************************************************************
consensus_10779#0 AGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTT 1610
consensus_10779#1 AGACGAAGATGGATCACGCTTTAATAACTTTCAGATTCTTCACAATCGCTACGCTCTGTT 1680
************************************************************
consensus_10779#0 AAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTA 1670
consensus_10779#1 AAATCTTCTTGGAAAGGGAGGGTTTAGTGAGGTTTATAAGGCATTTGATTTGGTGGAGTA 1740
************************************************************
consensus_10779#0 CAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCA 1730
consensus_10779#1 CAAGTATGTGGCATGTAAGCTTCATGGTTTGAATGCTCAGTGGAGTGAGGAGAAAAAGCA 1800
************************************************************
consensus_10779#0 AAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAA 1790
consensus_10779#1 AAGCTACATACGCCACGCCATTCGTGAATATAACATCCATAAGACTTTGGTGCATCCAAA 1860
************************************************************
consensus_10779#0 CATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGA 1850
consensus_10779#1 CATTGTCAGGCTATGGGACATATTTGAGATTGATCACAACACATTCTGCACTGTCCTAGA 1920
************************************************************
consensus_10779#0 ATATTGCAGTGGCA-AAGATCTTGATGCAGTCCTTAAAGCAACACCGATTCTTCCAGAAA 1909
consensus_10779#1 ATATTGCAGTGGTACAACAAATTTATT---TTCGCAACGACCTTCCAAATTTCTTTGACA 1977
************ * ** * ** ** * * ** * ** * * * ** *
consensus_10779#0 AGGAAGCGAGAATCATAATTGTCCAAATATTTCAAGGCCTAGT-TTATCTTAACAAGAGA 1968
consensus_10779#1 TGACAATGTAGATCGTG--CGGCCTCTTTTATAAATATCTCCCATTGGCTTCATTGTATA 2035
* * * *** * * ** * * * ** ** ** *** * * *
consensus_10779#0 ACTCAAAAGATCATTCACTATGATCTCAAACCAGGCAATGTTCTCTTCGATGAGGTTGGT 2028
consensus_10779#1 GAT-AAGGCTGCATGGGTGTTGTTTTTATGCCAGATA-TAT------------------- 2074
* ** *** ** * * * **** * * *
consensus_10779#0 GTTGCAAAAGTTACAGACTTTGGCCTCAGCAAGATAGTGGAGGATGATGTTGGGTCTCAG 2088
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 GGAATGGAACTGACTTCTCAGGGAGCTGGAACCTATTGGTACCTGCCACCGGAATGCTTT 2148
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 GATCTTAGCAAAACGCCATTTATCTCATCGAAGGTGGATGTTTGGTCAGCGGGTGTAATG 2208
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 TTTTACCAAATGCTCTTCGGAAGGCGTCCTTTTGGCCATGACCAGACCCAGGAGAGAATA 2268
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 CTTCGGGAAGATACAATCATCAACGCACGCAGAGTGGAATTCCCTTCAAAGCCAGCTGTA 2328
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 TCAAATGAGGCAAAGGAACTGATTCGTCGCTGCTTGACATACAACCAAGCAGAAAGACCA 2388
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 GACGTTCTAACCATCGCTCAAGAACCTTATCTGTCTTATGCAAAGAGGTAGTCACTCCGA 2448
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 AAGAGTGCAGGACAAGATTTTGGATCGGCAGCCGCTCGCGCAAGAACCCCGGAACATATT 2508
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 TATTTTGGACGGGGATGGGCACCAGCAAATGGTAAGAATCTGGCAAAGCTCAAGAATATC 2568
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 CCGAAGGGTGTTACTGTATATTTGTAAATATCACTTGTGCCCATAACAGCAATGACTAGA 2628
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 ACGGCAAGTGAACCTCCTCTTTAATCTAGAGGAGGTAGATTAGGCGTTAATTTTTGAACG 2688
consensus_10779#1 ------------------------------------------------------------
consensus_10779#0 GGCCATGCTCTTTTGCTACTTCTTG 2713
consensus_10779#1 -------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||