cluster # 10782

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Oryza sativa
cluster # 10782 cluster # 10782 Sequences # 8 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_10782#0 length = 1162 sequences # 6

consensus_10782#1 length = 771 sequences # 1
consensus_10782#2 length = 428 sequences # 1

consensusID : consensus_10782#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1162
fasta sequence

                              [TTCAAATCCATCCTTCGTCTCCTCTCCTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGCACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCGCCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGCCGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGGAGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTATGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACACAAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTGAACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATGTATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAGGAAGTGGTGAGGAGAATGCAAGTGAGGGTGTCTCAGATACCCTAGGGAACCTGAAATTGGATGATACTCCAAAAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCATTGCTGAAGATGGCACGGTCGATAAAACTGTTAAGGCTGAGAGTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTTTATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTAAAAATTCCAGATAT-TTTTCTCAAATCAGTTATCTATGTGAT-------GCCAGCCATTTTAAGGCGGAAGAATGATGGG-TTTTTTTTTTTTGGTAGGCCATG-GTTGGTATTGTTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCAGCCAATATAAAATTGGTTAGCTTTGTAAAAAAAAAA]

[+] EMBL AK059886             [TTCAAATCCATCCTTCGTCTCCTCTCCTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGCACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCTTACTCCTCTCGCTCGCCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGCCGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGGAGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTATGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACACAAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTGAACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATGTATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAGGAAGTGGTGAGGAGAATGCAAGTGAGGGTGTCTCAGATACCCTAGGGAACCTGAAATTGGATGATACTCCAAAAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCATTGCTGAAGATGGCACGGTCGATAAAACTGTTAAGGCTGAGAGTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTTTATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTAAAAATTCCAGA                                                                                                                                                                                                      ]
[+] EMBL AU181665             [                         CCTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGCACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCGCCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGCCGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGGAGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTATGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACACAAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTGAACAGCTGAGATCAGATTTTCAAGAATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AY224577             [                          CTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGCACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCGCCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGCCGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGGAGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTATGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACACAAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTGAACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATGTATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK101210             [                                                                    ACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCGCCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGCCGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGGAGGAGTTGCTGCCGGTGGAGGAGAAGGTCTCGGAATTAGATGAATCACAGTCACAGCTTATGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACACAAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTGAACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATGTATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAGGAAGTGGTGAGGAGAATGCAAGTGAGGGTGTCTCAGATACCCTAGGGAACCTGAAATTGGATGATACTCCAAAAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCATTGCTGAAGATGGCACGGTCGATAAAACTGTTAAGGCTGAGAGTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTTTATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTAAAAATTCCAGATAT TTTTCTCAAATCAGTTATCTATGTGAT       GCCAGCCATTTTAAGGCGGAAGAATGATGGG TTTTTTTTTTTTGGTAGGCCATG GTTGGTATTGTTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCAGCCAATATAAAATTGG                    ]
[-] EMBL CA761995             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAGGAAGTGGTGAGGAGAATGCAAGTGACGGTGTCTCAGATACCCTAGGGAACCTGAAATTGGATGATACTCCAAGAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCACTGCTGAAGATAGCACGGTCGATAAAACTGTTGAGGCTGAGACTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGATGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTGATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTATATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTATAAATTCCAGATATATTTTCTCAAATCAGTTGTCTATGTGATGCCAGCGGCCAGCCATTTTAAGGCGGTAGAATGATGG       TTTTTTT  TAGGCCATGTATTGGTATTGTTGACT AGGCTATGGATGAAATAATATTCATTTGAACGGTGAGTTTGAATCAAATCAGCCAATATAAAATTGGTTAGCTTTGTAAAAAAAAAA]
[+] EMBL BI812056             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCA CTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACCATTTTATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTAAAAATTCCAGATAT TTTTCTCAAATCAGTTATCTATGTGAT       GCCAGCCATTTTAAGGCGGAAGAATGATGGGTTTTTTTTTTTTTGGTAGGCCATG GTTGGTATTGTTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCAGCCAATATAAAATTGGTTAGCTTTGTATACAAAAAA]




>consensus_10782#0
TTCAAATCCATCCTTCGTCTCCTCTCCTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGC
ACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCG
CCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGC
CGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGG
AGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTA
TGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACAC
AAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTG
AACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATG
TATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAG
GAAGTGGTGAGGAGAATGCAAGTGAGGGTGTCTCAGATACCCTAGGGAACCTGAAATTGG
ATGATACTCCAAAAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCA
TTGCTGAAGATGGCACGGTCGATAAAACTGTTAAGGCTGAGAGTGCAAGTGATGAATGAA
GTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTA
ATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCG
TCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCG
TAGTAACAATTTTATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCT
TTAAAAATTCCAGATATTTTTCTCAAATCAGTTATCTATGTGATGCCAGCCATTTTAAGG
CGGAAGAATGATGGGTTTTTTTTTTTTGGTAGGCCATGGTTGGTATTGTTGACTGTGGCT
ATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCAGCCAATATAAAATT
GGTTAGCTTTGTAAAAAAAAAA

consensusID : consensus_10782#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 771
fasta sequence

                              [CCTAGGGAACCTGAAATTGGATGATACTCCAAGAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCACTGCTGAAGATAGCACGGTCGATAAAACTGTTGAGGCTGAGACTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTGATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTATATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTATAAATTCCAGATATATTTTCTCANAAAAAAAAANNNNAAAAAAAAAANNAAAAANNNAAAAAAAAAAAAAAANAAANAAAAAAAAAAAANANNNNNNAAAAAAAAAANNTTCTGAGAGGGGGGGGCCCGGGCCCCCAAATTCCCCCTTAAAAGGGAGTCGTTTTTACCCCCCCCCCCCTCTGGGCCGGGTTTTTTAAAACCCGTTGGGGGATGGGGGAAAAACCCCCGGGGGTTTCCCCCAAATTTAAATGGGCTTGTGAGAAAAAAATCCCCCTTTTTTCCCCAGGGGGGGGGTAATAAAAAAAAAAGAGGCCCCCCCCCCAATCCCCCTTTTTCCCAAAAATTTGCGCCCCCCCCTTTATAGGGGAAATGGGAGACCCCCCCCTTT]

[+] EMBL CA758256             [CCTAGGGAACCTGAAATTGGATGATACTCCAAGAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCACTGCTGAAGATAGCACGGTCGATAAAACTGTTGAGGCTGAGACTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTTTTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTGATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCCGTAGTAACAATTATATTGCTATCAGCAAGTTATCTAAAGAATAGCCACTGGAATTTTGCCTTTATAAATTCCAGATATATTTTCTCANAAAAAAAAANNNNAAAAAAAAAANNAAAAANNNAAAAAAAAAAAAAAANAAANAAAAAAAAAAAANANNNNNNAAAAAAAAAANNTTCTGAGAGGGGGGGGCCCGGGCCCCCAAATTCCCCCTTAAAAGGGAGTCGTTTTTACCCCCCCCCCCCTCTGGGCCGGGTTTTTTAAAACCCGTTGGGGGATGGGGGAAAAACCCCCGGGGGTTTCCCCCAAATTTAAATGGGCTTGTGAGAAAAAAATCCCCCTTTTTTCCCCAGGGGGGGGGTAATAAAAAAAAAAGAGGCCCCCCCCCCAATCCCCCTTTTTCCCAAAAATTTGCGCCCCCCCCTTTATAGGGGAAATGGGAGACCCCCCCCTTT]




>consensus_10782#1
CCTAGGGAACCTGAAATTGGATGATACTCCAAGAAACCATGATGAAAGCAGTGATGCCAA
TGATGAAAAGAATGAAACCACTGCTGAAGATAGCACGGTCGATAAAACTGTTGAGGCTGA
GACTGCAAGTGATGAATGAAGTAGCGGAGGAACCAGAAGTAGAACTTGGGCCGCTTCTTT
TTCGTGGCTCAGCTGTAGTAATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTC
CACGCTCTCTGATGGCTTCGTCGTGTAGTGTTGTTGATCGCTGTCATGACTTGTGAAATC
CCAGTTCTCTGGAATGGCCGTAGTAACAATTATATTGCTATCAGCAAGTTATCTAAAGAA
TAGCCACTGGAATTTTGCCTTTATAAATTCCAGATATATTTTCTCANAAAAAAAAANNNN
AAAAAAAAAANNAAAAANNNAAAAAAAAAAAAAAANAAANAAAAAAAAAAAANANNNNNN
AAAAAAAAAANNTTCTGAGAGGGGGGGGCCCGGGCCCCCAAATTCCCCCTTAAAAGGGAG
TCGTTTTTACCCCCCCCCCCCTCTGGGCCGGGTTTTTTAAAACCCGTTGGGGGATGGGGG
AAAAACCCCCGGGGGTTTCCCCCAAATTTAAATGGGCTTGTGAGAAAAAAATCCCCCTTT
TTTCCCCAGGGGGGGGGTAATAAAAAAAAAAGAGGCCCCCCCCCCAATCCCCCTTTTTCC
CAAAAATTTGCGCCCCCCCCTTTATAGGGGAAATGGGAGACCCCCCCCTTT

consensusID : consensus_10782#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 428
fasta sequence

                              [CTGGAATACGGANGTGCCACGCTGCCTGCTGGATGGGGCTTGCGTGCAGTGGTGTAGTGGTGTGGTGTGATATCGCGCTGGTGCCATGGACTGTGAGTCGACAATGCCCCNAGGTGTGTCTCTGGGCAATTGGCCGGTGAGTAACTNATTTGTATTGGCTATCAGCAAGTGTGATGCTAAAGGAATAGCCACTGGGAATGTTGTGGCCTGTGTGAAAAATGTCCAGGATGATTGTGTGTGCTGCAAATGCAGTGATGCTGATGTGCGATGCGCCTAGCCATGTGTTGAAGGCCGGAAGGAATGATGGGTTTTTTTTTTTTTGGTAGGCCATGGTTGGTATTGTTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCACNCCCATATAAAATTGTTAGCTTTGTAT]

[+] EMBL BQ907958             [CTGGAATACGGANGTGCCACGCTGCCTGCTGGATGGGGCTTGCGTGCAGTGGTGTAGTGGTGTGGTGTGATATCGCGCTGGTGCCATGGACTGTGAGTCGACAATGCCCCNAGGTGTGTCTCTGGGCAATTGGCCGGTGAGTAACTNATTTGTATTGGCTATCAGCAAGTGTGATGCTAAAGGAATAGCCACTGGGAATGTTGTGGCCTGTGTGAAAAATGTCCAGGATGATTGTGTGTGCTGCAAATGCAGTGATGCTGATGTGCGATGCGCCTAGCCATGTGTTGAAGGCCGGAAGGAATGATGGGTTTTTTTTTTTTTGGTAGGCCATGGTTGGTATTGTTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCACNCCCATATAAAATTGTTAGCTTTGTAT]




>consensus_10782#2
CTGGAATACGGANGTGCCACGCTGCCTGCTGGATGGGGCTTGCGTGCAGTGGTGTAGTGG
TGTGGTGTGATATCGCGCTGGTGCCATGGACTGTGAGTCGACAATGCCCCNAGGTGTGTC
TCTGGGCAATTGGCCGGTGAGTAACTNATTTGTATTGGCTATCAGCAAGTGTGATGCTAA
AGGAATAGCCACTGGGAATGTTGTGGCCTGTGTGAAAAATGTCCAGGATGATTGTGTGTG
CTGCAAATGCAGTGATGCTGATGTGCGATGCGCCTAGCCATGTGTTGAAGGCCGGAAGGA
ATGATGGGTTTTTTTTTTTTTGGTAGGCCATGGTTGGTATTGTTGACTGTGGCTATGGAT
GAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCACNCCCATATAAAATTGTTAG
CTTTGTAT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10782#0      TTCAAATCCATCCTTCGTCTCCTCTCCTCTCCTCCTCCCCTTCCACCCCACGCGCCCCGC 60
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      ACCCACCCACGCGCCGCGCCCTAACCCTAACCCTAACCCTAACCCTACTCCTCTCGCTCG 120
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      CCATGTCCGAGCCCGCGTCGCCCCCACCGGCCATGCCCGAGGACGCCGCGCCGCCGCAGC 180
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      CGCAGCCGGAGCCGGCGGTTCCAGCGGGGGAGGAGGCCGCCCCGTCTCTGGAGAGGAAGG 240
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      AGGAGTTGCTGCCGGTGGAGGAGAAGATCTCGGAATTAGATGAATCACAGTCACAGCTTA 300
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      TGGGGAGACTTCGGGGACTCAAGGAGGATTTGCTGAATTGGAGGAGCAGTTTAGATACAC 360
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      AAGTGACAAAATACAAAAGCGAACTCTCTGATATCAAAACTGCGCTGAATAGCGAAATTG 420
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      AACAGCTGAGATCAGATTTTCAAGAATTGAGGACCACCCTTAAGAAGCAGCAGGAAGATG 480
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      TATCAAATAGTTTGAAGAATTTGGGGCTACAAGATGCTACTGACAATGATGGGAACAAAG 540
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ------------------------------------------------------------
                                                                                   

consensus_10782#0      GAAGTGGTGAGGAGAATGCAAGTGAGGGTGTCTCAGATACCCTAGGGAACCTGAAATTGG 600
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ----------------------------------------CCTAGGGAACCTGAAATTGG 20
                                                                                   

consensus_10782#0      ATGATACTCCAAAAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCA 660
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      ATGATACTCCAAGAAACCATGATGAAAGCAGTGATGCCAATGATGAAAAGAATGAAACCA 80
                                                                                   

consensus_10782#0      TTGCTGAAGATGGCACGGTCGATAAAACTGTTAAGGCTGAGAGTGCAAGTGATGAATGAA 720
consensus_10782#2      -------------------------------------------------------CTGGA 5
consensus_10782#1      CTGCTGAAGATAGCACGGTCGATAAAACTGTTGAGGCTGAGACTGCAAGTGATGAATGAA 140
                                                                               ** *

consensus_10782#0      GTAGCGGAGGAACCAGAAGTAGAACTTGG-GCCGCTTCTTTTTCGTGGCTCAGCTGTAGT 779
consensus_10782#2      ATA-CGGANGTGCCACGCTGCCTGCTGGATGGGGCTTGCGTGCAGTGGTGTAGTGGTGTG 64
consensus_10782#1      GTAGCGGAGGAACCAGAAGTAGAACTTGG-GCCGCTTCTTTTTCGTGGCTCAGCTGTAGT 199
                        ** **** *  ***         ** *  *  ****   *   ****   **  **   

consensus_10782#0      AATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTC 839
consensus_10782#2      GTGTGATATCGCGCTGGTG-CCATGGACTGTGAGTCGA--CAATGCCCCNAGGTG-TGTC 120
consensus_10782#1      AATTTTTAGAACAGAGATAACTTTGGTTCCTGAAACGAGTCCACGCTCTCTGATGGCTTC 259
                          *  **   *   * *  *  ***    ***  ***  * * ** *   * **   **

consensus_10782#0      GTCGTGTAGTGTTGTTAATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCC 899
consensus_10782#2      TCTGGGCAAT-TGGCCGGTGAGTAAC-TNATTTGT--ATTGGCTATCAGCAAGTGTGATG 176
consensus_10782#1      GTCGTGTAGTGTTGTTGATCGCTGTCATGACTTGTGAAATCCCAGTTCTCTGGAATGGCC 319
                          * * * * * *    *   *  * * * ****  * *  *  *   *  *  **   

consensus_10782#0      GTAGTAACAATTTTATTGCTATCA--GCAAGTTATCTAAAGAATAGCCACTGGAATTTTG 957
consensus_10782#2      CTAAAGGAATAGCCACTGGGAATGTTGTGGCCTGTGTGAAAAATGTCCAGGATGATTGTG 236
consensus_10782#1      GTAGTAACAATTATATTGCTATCA--GCAAGTTATCTAAAGAATAGCCACTGGAATTTTG 377
                        **     *     * **  *     *     * * * ** ***  ***     *** **

consensus_10782#0      CCTTTAAAAATTCCAGATATTTTTCTCAAATCAGTTATCTATGTGAT-----GCCAGCCA 1012
consensus_10782#2      TGTGCTGCAAATGCAGTGATGCT-----GATGTGCGATGCGCCTA-------GCCATGTG 284
consensus_10782#1      CCTTTATAAATTCCAGATATATTTTCTCANAAAAAAAAANNNNAAAAAAAAAANNAAAAA 437
                         *     ** * ***  **  *             *                  *    

consensus_10782#0      TTTTAAGGCGGAAG-AATGA--TGGGTTTTTTTTTTTT-GGTAGGCCATGGTTGGTATTG 1068
consensus_10782#2      TTGAAGGCCGGAAGGAATGA--TGGGTTTTTTTTTTTTTGGTAGGCCATGGTTGGTATTG 342
consensus_10782#1      NNNAAAAAAAAAAAAAAANAAANAAAAAAAAAAAANANNNNNNAAAAAAAAAANNTTCTG 497
                           *      **  **  *                           *       *  **

consensus_10782#0      TTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCA-G 1127
consensus_10782#2      TTGACTGTGGCTATGGATGAAATAGTATTCATTTGAACGGTGAGTTTGAATCAAATCACN 402
consensus_10782#1      AGAGGGGGGGGCCCGGGCCCCCAAATTCCCCCTTAAAAGG-GAGTCGTTTTTACCCCCCC 556
                             * **    **       * *   *  ** ** ** ****     * *   *   

consensus_10782#0      CCAATATAAAATTGGTTAGCTTTGTAAAAAAAAAA------------------------- 1162
consensus_10782#2      CCCATATAAAATTG-TTAGCTTTGTAT--------------------------------- 428
consensus_10782#1      CCCCCTCTGGGCCGGGTTTTTTAAAACCCGTTGGGGGATGGGGGAAAAACCCCCGGGGGT 616
                       **           *  *   **   *                                  

consensus_10782#0      ------------------------------------------------------------
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      TTCCCCCAAATTTAAATGGGCTTGTGAGAAAAAAATCCCCCTTTTTTCCCCAGGGGGGGG 676
                                                                                   

consensus_10782#0      ------------------------------------------------------------
consensus_10782#2      ------------------------------------------------------------
consensus_10782#1      GTAATAAAAAAAAAAGAGGCCCCCCCCCCAATCCCCCTTTTTCCCAAAAATTTGCGCCCC 736
                                                                                   

consensus_10782#0      -----------------------------------
consensus_10782#2      -----------------------------------
consensus_10782#1      CCCCTTTATAGGGGAAATGGGAGACCCCCCCCTTT 771