These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10791#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2350 fasta sequence [GCCACTCCCCCCTCTCCCACTCCATTTCTCCAAACCAAAGCTCTCTCCCACCTCCGCTTCCGCCATGGCCACCGCTCGCGCCGCGTGGTAGCCACAGCCCACAGCCACAGCTGCCAGATCCCGCGGGGACGCAGGAGGAGGTGGGTGGGTCGAGCTCGCTTGCGGGGGAGGGAGCCGAGGCGAAGGCGAGGCGAGGCGACGCCATGGGGGGATGCCACGCGAAGCCGCTGACGCACGAGGAGGCCGACGGCGCCTGCTCGCCCCCGCGCGAGCGGCCGCAGCCGCCGGCCACGCCGCCGCGGGGGTCCGGCGCGGCCACCCCCGCGTGGAAGACGAAGCCGTGGGCGTCGCCCTTCTTCGGGTTCTCCACGCCCAGCCCGAGCCCTGCGCACCACCTCTTCTCGGCCTCCTCCCCGCGGAGGTCCCCCGCCCCGTCCGCGCCCACCACGCCCGCGAGGCGGTTGCTGCGGCTGCCGTTCCCGCCGCCGTCGCCCGCCAAGCACATCCGGCAGGCGCTCGCGCGGCGCCACGGGCCCCCGCGGCCGCCGATCCCCGAGGAGGGCGGCGACGTGGAAGGGGAGGGCGGCCGCGGGCTCGACAAGGGGTTCGGGTTCAACAAGGGGTTCGCGGCGAAGTACGACATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCAC-AAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGAT-CATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTTAAAAATGTTAAAAAAAA] [+] EMBL AK121343 [GCCACTCCCCCCTCTCCCACTCCATTTCTCCAAACCAAAGCTCTCTCCCACCTCCGCTTCCGCCATGGCCACCGCTCGCGCCGCGTGGTAGCCACAGCCCACAGCCACAGCTGCCAGATCCCGCGGGGACGCAGGAGGAGGTGGGTGGGTCGAGCTCGCTTGCGGGGGAGGGAGCCGAGGCGAAGGCGAGGCGAGGCGACGCCATGGGGGGATGCCACGCGAAGCCGCTGACGCACGAGGAGGCCGACGGCGCCTGCTCGCCCCCGCGCGAGCGGCCGCAGCCGCCGGCCACGCCGCCGCGGGGGTCCGGCGCGGCCACCCCCGCGTGGAAGACGAAGCCGTGGGCGTCGCCCTTCTTCGGGTTCTCCACGCCCAGCCCGAGCCCTGCGCACCACCTCTTCTCGGCCTCCTCCCCGCGGAGGTCCCCCGCCCCGTCCGCGCCCACCACGCCCGCGAGGCGGTTGCTGCGGCTGCCGTTCCCGCCGCCGTCGCCCGCCAAGCACATCCGGCAGGCGCTCGCGCGGCGCCACGGGCCCCCGCGGCCGCCGATCCCCGAGGAGGGCGGCGACGTGGAAGGGGAGGGCGGCCGCGGGCTCGACAAGGGGTTCGGGTTCAACAAGGGGTTCGCGGCGAAGTACGACATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCAC AAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGAT CATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTT ] [+] EMBL AK119196 [ AGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAGGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCAC AAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGAT CATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTT ] [+] EMBL BI806524 [ tcGCAAGATTGGATCA GCACACCGACGGGGAATGGAGTTT CTGGGATTGGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTC AAGATGAGATAGCTGTTGATACTCTCTAACGACAGCACAAAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGAT CATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTAAAAAAAAAA ] [+] EMBL C22391 [ GACAGCAC AAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGATCCATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTTTTTGGTGTTAAAAAAAA] consensusID : consensus_10791#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1855 fasta sequence [CGGTTCAACAAGGGGTTCGCGGCGAAGTACGACATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCTATGAGGACAATGACAATGTGTACATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCACAAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGATCATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTT] [+] EMBL C22392 [CGGTTCAACAAGGGGTTCGCGGCGAAGTACGACATGGGGGACGAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCTATGAGGACAATGACAATGTGTACATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGT ] [+] EMBL AK067709 [ GAGGTGGGGAGAGGCCACTTCGGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGGAGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCTATGAGGACAATGACAATGTGTACATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTTCTGGATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTTGTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCAGTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTATGATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTGGGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGACGGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTGTCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCACAAATTTATGCTGCCCTAGCGCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGATCATCGATCGGAGTCCACCGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAGTTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAATGAAAAACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTGTTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGGGCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGCTGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTT] [+] EMBL CB618385 [ TCCAGCGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTGCAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAGCCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTTGGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTATTATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATAGGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCTGGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCTCTTACTCCGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGAATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTGCCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGAAAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAAGGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGAATGGCCTTAACAAGAGAAGCCACTGATGCTATGAAGGAATCACGAGTTCAGGAGAT ] consensusID : consensus_10791#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 444 fasta sequence [AGCCCAAATTTATGTTGCCCTAGCGGGAGGTGAATCGGTCCAGCCAAGTTTCCAAGGAAATTTCGTTCATCGATGGGAGTCCAGCGCCCGAAGATAACAGCTTGTGTTAGCAGTCCTTGTTTTTTCCCTAATTTGAGTATAGAGTTCAGTTTGTTGTCCCCTCCCTATTGATCCCCCCCATTTTGGTTGTTGGGAAAAATGAAAACCCTCCCCCCATGTTTGCAACATGTGATGTTTTTAACATTTTTTAGGATACCCATCCTGTTCAGTTGTTGGGACTTTCCCAGTTGGGTTGTAAAATTCCCGGGTTCTTTTGGAACTGGGGGGAAGTCCCCTGCTGTTAAGGAAGTAAGGTTCCTGATGTCCAAGGGGGGGGTTTAATGCTCCCATTTTCAAGGGTGCCGTTTTTTTGTTTCAGAAGGAAAAAAATGGGGTATTTTTTTG] [-] EMBL CB618386 [AGCCCAAATTTATGTTGCCCTAGCGGGAGGTGAATCGGTCCAGCCAAGTTTCCAAGGAAATTTCGTTCATCGATGGGAGTCCAGCGCCCGAAGATAACAGCTTGTGTTAGCAGTCCTTGTTTTTTCCCTAATTTGAGTATAGAGTTCAGTTTGTTGTCCCCTCCCTATTGATCCCCCCCATTTTGGTTGTTGGGAAAAATGAAAACCCTCCCCCCATGTTTGCAACATGTGATGTTTTTAACATTTTTTAGGATACCCATCCTGTTCAGTTGTTGGGACTTTCCCAGTTGGGTTGTAAAATTCCCGGGTTCTTTTGGAACTGGGGGGAAGTCCCCTGCTGTTAAGGAAGTAAGGTTCCTGATGTCCAAGGGGGGGGTTTAATGCTCCCATTTTCAAGGGTGCCGTTTTTTTGTTTCAGAAGGAAAAAAATGGGGTATTTTTTTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10791#0 GCCACTCCCCCCTCTCCCACTCCATTTCTCCAAACCAAAGCTCTCTCCCACCTCCGCTTC 60 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CGCCATGGCCACCGCTCGCGCCGCGTGGTAGCCACAGCCCACAGCCACAGCTGCCAGATC 120 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CCGCGGGGACGCAGGAGGAGGTGGGTGGGTCGAGCTCGCTTGCGGGGGAGGGAGCCGAGG 180 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CGAAGGCGAGGCGAGGCGACGCCATGGGGGGATGCCACGCGAAGCCGCTGACGCACGAGG 240 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 AGGCCGACGGCGCCTGCTCGCCCCCGCGCGAGCGGCCGCAGCCGCCGGCCACGCCGCCGC 300 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGGGGTCCGGCGCGGCCACCCCCGCGTGGAAGACGAAGCCGTGGGCGTCGCCCTTCTTCG 360 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGTTCTCCACGCCCAGCCCGAGCCCTGCGCACCACCTCTTCTCGGCCTCCTCCCCGCGGA 420 consensus_10791#1 ------------------------------------------------------------ consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGTCCCCCGCCCCGTCCGCGCCCACCACGCCCGCGAGGCGGTTGCTGCGGCTGCCGTTCC 480 consensus_10791#1 -----------------------------------------------------CGGTTCA 7 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CGCCGCCGTCGCCCGCCAAGCACATCCGGCAGGCGCTCGCGCGGCGCCACGGGCCCCCGC 540 consensus_10791#1 ACAAGGGGTTCGCGGCGAAGTACGAC--ATGGGGGACGAGGTGGGG--AGAGGCCACTTC 63 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGCCGCCGATCCCCGAGGAGGGCGGCGACGTGGAAGGGGAGGGCGGCCGCGGGCTCGACA 600 consensus_10791#1 GGCTACACCTGCGCCGCGAAGATCAAGAAGGGGGCGCGCAAGGGGGACGCGG--TCGCCG 121 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 AGGGGTTCGGGTTCAACAAGGGGTTCGCGGCGAAGTACGACATGGGGGACGA--GGTGGG 658 consensus_10791#1 TCAAGGTCATCCCCAAGGCCAAGATGACAACATCCATTGCTATAGAGGATGTCCGAAGGG 181 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GAGAGGCCACTTCGGCTACACCTGCGCCGCG-AAGATCAAGAAGGGGGCGCGCAAGGGGG 717 consensus_10791#1 AGGTGAAAATATTGAAAGCTTTGGCGGGACACAAGAACTTGGTTCAATTTTATGATGCCT 241 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 ACGCGGTCGCCGTCAAGGTCATCCCCAAGGCCAAGGTTGTGTGAAGGAGGAGAGCTTCTG 777 consensus_10791#1 ATGAGGACAATGACAATGT-GTACATAGTAATGGAGTTGTGTGAAGGAGGAGAGCTTCTG 300 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTG 837 consensus_10791#1 GATAGAATACTTTCCAGAGGTGGGAAGTACTCTGAGGATGATGCAAAAGCGGTTCTGGTG 360 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAG 897 consensus_10791#1 CAAATATTAAATGTCGTTTCATTTTGCCACATTCAAGGAGTGGTTCATCGGGATCTCAAG 420 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTT 957 consensus_10791#1 CCAGAGAATTTTCTATTTACTTCAAAAGATGAGAACTCTCAACTTAAGGCTATTGATTTT 480 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTAT 1017 consensus_10791#1 GGCTTATCAGATTTTGTAAAACCAGATGAGAGGCTAAATGATATTGTTGGAAGTGCTTAT 540 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 TATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATA 1077 consensus_10791#1 TATGTTGCTCCTGAAGTTCTGCACAGATGCTATAGCACAGAAGCTGATGTCTGGAGTATA 600 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCT 1137 consensus_10791#1 GGTGTAATTGCATATATTCTCCTTTGTGGCAGTCGTCCATTTTGGGCACGCACTGAATCT 660 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCT 1197 consensus_10791#1 GGCATATTCCGTTCCGTTCTCAAAGCTGACCCCAGTTATAATGAGGCACCTTGGCCTTCT 720 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGA 1257 consensus_10791#1 CTTACTCTGGAAGCAATGGATTTTGTTAAGCGCTTGCTTTGCAAGGATCCACGTAGAAGA 780 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 ATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTG 1317 consensus_10791#1 ATGACTGCAGCACAGGCTTTAAGTCATCCATGGATCAGAAATTACAATGACATTAAGCTG 840 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 CCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGA 1377 consensus_10791#1 CCACTGGACATCCTTATATTCCGACTTATCAAAGCTTATATTCGTTCCTCATCATTGCGA 900 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 AAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAA 1437 consensus_10791#1 AAAGCTGCTCTAAGGGCTCTATCGAAGACTTTGACTGTTGATGAGCTTTTCTATCTGAAA 960 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGA 1497 consensus_10791#1 GGACAGTTTTCTCTGTTGGAACCAGACAGAAATGGATGCATCACTCTAGATAATATCAGA 1020 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 ATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTT 1557 consensus_10791#1 ATGGCCTTAACAAGAGAAGCCACTTATGCTATGAAGGAATCACGAGTTCAGGAGATTCTT 1080 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCA 1617 consensus_10791#1 GTCTCGTTAAGCGCTCTTCAGTACAGAAGAATGGACTTTCAAGAGTTCTGTGCAGCAGCA 1140 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTAT 1677 consensus_10791#1 GTTAGTGTGCACCAGCTTGAAGCATTAGATAGATGGGAGCAACATGCCCGTTCCGCTTAT 1200 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTG 1737 consensus_10791#1 GATTTCTTTGAGAAGGATGGCAATCGAGCTATCGTAATTGATGAACTAGCTTCTGAACTG 1260 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGAC 1797 consensus_10791#1 GGTCTCAGCCCTTCAGTGCCATTGCATGTTGTTCTGCAAGATTGGATCAGGCACACCGAC 1320 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 GGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTG 1857 consensus_10791#1 GGGAAATTGAGTTTCCTTGGATTTGTCAAGTTATTGCATGGCATGTCCAGCAGGTCCTTG 1380 consensus_10791#2 ------------------------------------------------------------ consensus_10791#0 TCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCACAAATTTATGCTGCCCTAGC 1917 consensus_10791#1 TCAAAGATGAGATAGCTGTTGATACTCTCTAACGACAGCACAAATTTATGCTGCCCTAGC 1440 consensus_10791#2 ------------------------------------AGCCCAAATTTATGTTGCCCTAGC 24 *** ********** ********* consensus_10791#0 GCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGATCATCGATCGGAGTCCAC 1977 consensus_10791#1 GCGAGCTGAATCGGTCCAGACAAGTTTACAAGGAAACATCGATCATCGATCGGAGTCCAC 1500 consensus_10791#2 GGGAGGTGAATCGGTCCAGCCAAGTTTCCAAGGAAATTTCGTTCATCGATGGGAGTCCAG 84 * *** ************* ******* ******** *** ******** ******** consensus_10791#0 CGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAG 2037 consensus_10791#1 CGACCGAAGATAACAGCTTGTGCTAGCAGTCCTTGTTTTCTCACTAATTTGAGTATAGAG 1560 consensus_10791#2 CGCCCGAAGATAACAGCTTGTGTTAGCAGTCCTTGTTTTTTCCCTAATTTGAGTATAGAG 144 ** ******************* **************** ** ***************** consensus_10791#0 TTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAAATGAAA 2097 consensus_10791#1 TTCAGTTTGTTGTCGCCTGCCTACTGATCACCACCATTTTAGTTGATAGGAAAA-TGAAA 1619 consensus_10791#2 TTCAGTTTGTTGTCCCCTCCCTATTGATCCCCCCCATTTTGGTTGTTGGGAAAAATGAAA 204 ************** *** **** ***** ** ******* **** * ****** ***** consensus_10791#0 AACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTG 2157 consensus_10791#1 AACCTCACCCCATGTCTGCAACATGTGATGTCTCTAACAGTCTTTAGGATAGCCATCCTG 1679 consensus_10791#2 ACCCTCCCCCCATGTTTGCAACATGTGATGTTTTTAACATTTTTTAGGATACCCATCCTG 264 * **** ******** *************** * ***** * ********* ******** consensus_10791#0 TTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGG 2217 consensus_10791#1 TTCAGTTGTTGGGACTGTCCCAGTTGTGTTGTAAAATTCCCTGGTTCCTCTGGAACTGGG 1739 consensus_10791#2 TTCAGTTGTTGGGACTTTCCCAGTTGGGTTGTAAAATTCCCGGGTTCTTTTGGAACTGGG 324 **************** ********* ************** ***** * ********** consensus_10791#0 GCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGC 2277 consensus_10791#1 GCGAAGTCGCCTGCTGTTAAGGAAGTAAGGATCCTGATGTCCAAGAGGGTGGTTTAATGC 1799 consensus_10791#2 GGGAAGTCCCCTGCTGTTAAGGAAGTAAGGTTCCTGATGTCCAAGGGGGGGGTTTAATGC 384 * ****** ********************* ************** *** ********** consensus_10791#0 TGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTTAAAA 2337 consensus_10791#1 TGCCATTGTCAAGTGTGCCGTTATACTGATTCAGAATGAAAAAAATGTGGTATTTT---- 1855 consensus_10791#2 TCCCATTTTCAAGGGTGCCGTTTTTTTGTTTCAGAAGGAAAAAAATGGGGTATTTTTTTG 444 * ***** ***** ******** * ** ******* ********** ******** consensus_10791#0 ATGTTAAAAAAAA 2350 consensus_10791#1 ------------- consensus_10791#2 ------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||