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Oryza sativa
cluster # 10797 cluster # 10797       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10797#0 length = 2464 sequences # 4  
consensus_10797#1 length = 785 sequences # 4  

consensusID : consensus_10797#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2464
fasta sequence
                              [GGCACGAGGCTTTACTCGCGACGCCCCAAAGCCGCAGCAGCAGCAGCGCCGCACGCGGCAGCAATGGCGGACTCCATCGAGCTCGCGCGCCGCCTCTGCCTCCAGCCTCCGGCGCGGAGGACGGGAACGGGAAGGTGCAGGCCGCGGGGCCGCCTCGGAGCTCCCTCCCTCCGCGTCCCGCGCCCTCCCCTCTCCCTCTCCCTCTCCCTCTGGTCGTCGCTCCGGTGCCGCGCGCTCGACTCCACCAGGCCGGTCGCGGTGGAGGGGGGCCTGGGAGACGAGGAGGACGAGGATGAGGAGGGGGAGTCGTACTTCGCCTTGACCTCGTCGAGGCTCTCGCGGGTGGACTACCTAGGGGAGAGCACCAAGGGGGATTTGAACGTGCGGAGGGAGCATCTCGACGCGTTTGGTGGGAATGGCAAGTCGACATTGCATGGCCCTATAGAGGAGATAGCTTGGCAAGAAGCGAGAGAAGCTGAATCGTTGCTCCGTGAGTTGGGAATTGCAGATCCTTTTTCCGTAAGACACTCTCCTCGTGGAATATTTTGCACCAGGACACTAAATCTTCGATCCATCAGTGTCATTGGCTATGATATGGACTATACATTGATTCACTACAATGTGATGGCTTGGGAAGGGCGTGCTTATGATTATGGTATGGCCAATCTGAAGGGCATGGGTTTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTCATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGTTACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATATATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTTTTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCACTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGATTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAAAGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCATTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTCTCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAATGATGGATTAATGCGTCCCTGTTTTAAAGCTAATTCAGGTGGATTGTACTCTGGTGGCAGTGCTCAGATGGTTGAGAAGTCACTAGACATCCATGGAGATGAAATATTATATGTGGGGGATCATATTTACACAGATGTAAGCCAGTCTAAAGTTCATTTACGATGGAGGACAGCACTAATCTGCAGAGAACTAGAAGACGAGTTTGATGCACTAATTCGAAGCCATGTTCAGAAAGAACAGCTTATCACACTTATACAACAAAAGGAAGTCGTGGGAGATCTTTTTAACCAGCTTCGGCTGGCTCTGCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGAAAAATCATATTTTAAAGGCCATGTTTCAGACCTCTCATTCAGAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAG-AGATAGAAAGGCAGCTGG--ATGG-ACGTGCTTGTGCCA-GTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTGTCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTCCATTGTT]

[+] EMBL AK065179             [GGCACGAGGCTTTACTCGCGACGCCCCAAAGCCGCAGCAGCAGCAGCGCCGCACGCGGCAGCAATGGCGGACTCCATCGAGCTCGCGCGCCGCCTCTGCCTCCAGCCTCCGGCGCGGAGGACGGGAACGGGAAGGTGCAGGCCGCGGGGCCGCCTCGGAGCTCCCTCCCTCCGCGTCCCGCGCCCTCCCCTCTCCCTCTCCCTCTCCCTCTGGTCGTCGCTCCGGTGCCGCGCGCTCGACTCCACCAGGCCGGTCGCGGTGGAGGGGGGCCTGGGAGACGAGGAGGACGAGGATGAGGAGGGGGAGTCGTACTTCGCCTTGACCTCGTCGAGGCTCTCGCGGGTGGACTACCTAGGGGAGAGCACCAAGGGGGATTTGAACGTGCGGAGGGAGCATCTCGACGCGTTTGGTGGGAATGGCAAGTCGACATTGCATGGCCCTATAGAGGAGATAGCTTGGCAAGAAGCGAGAGAAGCTGAATCGTTGCTCCGTGAGTTGGGAATTGCAGATCCTTTTTCCGTAAGACACTCTCCTCGTGGAATATTTTGCACCAGGACACTAAATCTTCGATCCATCAGTGTCATTGGCTATGATATGGACTATACATTGATTCACTACAATGTGATGGCTTGGGAAGGGCGTGCTTATGATTATGGTATGGCCAATCTGAAGGGCATGGGTTTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTCATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGTTACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATATATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTTTTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCACTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGATTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAAAGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCATTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTCTCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAATGATGGATTAATGCGTCCCTGTTTTAAAGCTAATTCAGGTGGATTGTACTCTGGTGGCAGTGCTCAGATGGTTGAGAAGTCACTAGACATCCATGGAGATGAAATATTATATGTGGGGGATCATATTTACACAGATGTAAGCCAGTCTAAAGTTCATTTACGATGGAGGACAGCACTAATCTGCAGAGAACTAGAAGACGAGTTTGATGCACTAATTCGAAGCCATGTTCAGAAAGAACAGCTTATCACACTTATACAACAAAAGGAAGTCGTGGGAGATCTTTTTAACCAGCTTCGGCTGGCTCTGCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGAAAAATCATATTTTAAAGGCCATGTTTCAGACCTCTCATTCAGAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAG AGATAGAAAGGCAGCTGG  ATGG ACGTGCTTGTGCCA GTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTGTCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTC       ]
[+] EMBL CB632747             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ATCCTTTTTCCGTAAGACACTCTCCTCGTGGAATATTTTGCACCAGGACACTAAATCTTCGATCCATCAGTGTCATTGGCTATGATATGGACTATACATTGATTCACTACAATGTGATGGCTTGGGAAGGGCGTGCTTATGATTATGGTATGGCCAATCTGAAGGGCATGGGTTTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTCATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGTTACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATATATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTTTTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCACTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGATTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAAAGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCATTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTCTCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAATGATGGATTAATGCGTCCCTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB669659             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCATGGGTCTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTCATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGTTACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATATATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTTTTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTGGTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCACTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGATTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAAAGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCATTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTCTCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAATGATGGATTAATGCGTCCCTGTTTTAAAGCTAATTCAGGTGGATTGTACTCTGGTGGCAGTGCTCAGATGGTTGAGAAGTCACTAGACATCCATGGAGATGAAATATTATATGTGGGGGATCATATTTACACAGATGTAAGCCAGTCTAAAGTTCATTTACGATGGAGGACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BI806694             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ATTCCCGGAGGCTACAACACTGACATTCGTTCGATTCATCATGCAGGGGGNGGAGTNGGGAGAAAAATCGGTAGTAGATAGAAA GCAGCTGGGTATGGTACGTGCTTGTGCCACGTGTGTGACCCGTGGCGATTGATCTTGATGCAGCGAGGCA GCCATTTGGAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGAGTCATTAGCNTGTAATAACCCGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGTAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAA TTTTGTAAGATTTTCATCTGATCATCTCAGCATCTGTNTAAACTCTGGACTGTCACTTGAAACAGGTAAATTCCAGAAAAATAAGAAGAATCCCATTGTT]


>consensus_10797#0 GGCACGAGGCTTTACTCGCGACGCCCCAAAGCCGCAGCAGCAGCAGCGCCGCACGCGGCA GCAATGGCGGACTCCATCGAGCTCGCGCGCCGCCTCTGCCTCCAGCCTCCGGCGCGGAGG ACGGGAACGGGAAGGTGCAGGCCGCGGGGCCGCCTCGGAGCTCCCTCCCTCCGCGTCCCG CGCCCTCCCCTCTCCCTCTCCCTCTCCCTCTGGTCGTCGCTCCGGTGCCGCGCGCTCGAC TCCACCAGGCCGGTCGCGGTGGAGGGGGGCCTGGGAGACGAGGAGGACGAGGATGAGGAG GGGGAGTCGTACTTCGCCTTGACCTCGTCGAGGCTCTCGCGGGTGGACTACCTAGGGGAG AGCACCAAGGGGGATTTGAACGTGCGGAGGGAGCATCTCGACGCGTTTGGTGGGAATGGC AAGTCGACATTGCATGGCCCTATAGAGGAGATAGCTTGGCAAGAAGCGAGAGAAGCTGAA TCGTTGCTCCGTGAGTTGGGAATTGCAGATCCTTTTTCCGTAAGACACTCTCCTCGTGGA ATATTTTGCACCAGGACACTAAATCTTCGATCCATCAGTGTCATTGGCTATGATATGGAC TATACATTGATTCACTACAATGTGATGGCTTGGGAAGGGCGTGCTTATGATTATGGTATG GCCAATCTGAAGGGCATGGGTTTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTC ATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGT TACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATA TATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTT TTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTG GTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCA CTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGA TTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAA AGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCA TTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTC TCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAAT GATGGATTAATGCGTCCCTGTTTTAAAGCTAATTCAGGTGGATTGTACTCTGGTGGCAGT GCTCAGATGGTTGAGAAGTCACTAGACATCCATGGAGATGAAATATTATATGTGGGGGAT CATATTTACACAGATGTAAGCCAGTCTAAAGTTCATTTACGATGGAGGACAGCACTAATC TGCAGAGAACTAGAAGACGAGTTTGATGCACTAATTCGAAGCCATGTTCAGAAAGAACAG CTTATCACACTTATACAACAAAAGGAAGTCGTGGGAGATCTTTTTAACCAGCTTCGGCTG GCTCTGCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGAT GATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAA AAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGAAAAATCATATTT TAAAGGCCATGTTTCAGACCTCTCATTCAGAAAGATGGGGTTGGCTATCACGTACGGGCC TATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAA GGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGC TTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCAT CATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACG TGCTTGTGCCAGTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAGGCCATTTG GAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAA GTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTT TCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGG GCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTG TCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTCCAT TGTT



consensusID : consensus_10797#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 785
fasta sequence
                              [GCAGAGACGAACAAA-TTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACGTGCTTGTGCCAGTGTGTG-AGCCGTGGCGATTGATC-TTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTCGCGTTA-CGTAGCG-ATTA-TGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGA-GTCATTAGC-TTGTAATAACA-CGATT-GGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTGTCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTC]

[+] EMBL BP184543             [GCAGAGACGAACAAA TTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACGTGCTTGTGCCAGTGTGTGAACCCGTGGCNAATGATCTTTGATGCAACGAGGCANGCCATTTGGAACGTTTTCGCGTTACCGTAACGAATTATTGTCGNGTATAGCTGNGTGT CCTGGGGTNTAAGTAGAGGTCATTAGCTTTGGAATAACACCGATTGGGAATnaaa                                                                                                                                                                                                      ]
[-] EMBL CB632748             [           CAAATTTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACGTGCTTGTGCCAGTGTGTG AGCCGTGGCGATTGATC TTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTCGCGTTA CGTAGCG ATTA TGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGA GTCATTAGC TTGTAATAACA CGATT GGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTGTCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTC]
[-] EMBL CB669660             [                                                           CAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGATGGGGTTGGCTATCACGTACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACCCATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACGTGCTTGTGCCAGTGTGTG AGCCGTGGCGATTGATC TTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTTGCGTTA CGTAGCG ATTA TGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGA GTCATTAGC TTGTAATAACA CGATT GGAATAAGCCCGTGCGGTCGTTTTTTTCTTTTTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGCCCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATTTGATCATTTCAGCATCTGTTTAAACTTTGGACTGTCCCTTGAAACAGTTAAATTCCCGAAA              ]
[-] EMBL OSA312765            [                                                                                                                                                                                                                                                                                                                                                                       TTCGATTCATGATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACGTGCTTGTGCCAGTGTGTG AGCCGTGGCGATTGATC TTGATGCAGCGAGGCAGGCCATTTGGAACGTTTTCGCGTTA CGTAGCG ATTA TGTCGTGTATAGCTGTGTGTACTTGGGGTGTAAGTAGA GTCATTAGC TTGTAATAACA CGATT GGAATAAGCCCGTGCGGTCGTTTTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATC                                                                           ]


>consensus_10797#1 GCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGATGATCA GGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAAAAAAT TGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGATGGGGTTGGCTATCACG TACGGGCCTATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATA CACATCAAGGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGA ACAGACGCTTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTT CGATTCATCATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTG GATGGACGTGCTTGTGCCAGTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAG GCCATTTGGAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTG GGGTGTAAGTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTT TTCTTCTTTCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGG AAAGTTGGGCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTC AGCATCTGTCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAG AAGTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10797#0      GGCACGAGGCTTTACTCGCGACGCCCCAAAGCCGCAGCAGCAGCAGCGCCGCACGCGGCA 60
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GCAATGGCGGACTCCATCGAGCTCGCGCGCCGCCTCTGCCTCCAGCCTCCGGCGCGGAGG 120
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      ACGGGAACGGGAAGGTGCAGGCCGCGGGGCCGCCTCGGAGCTCCCTCCCTCCGCGTCCCG 180
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      CGCCCTCCCCTCTCCCTCTCCCTCTCCCTCTGGTCGTCGCTCCGGTGCCGCGCGCTCGAC 240
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TCCACCAGGCCGGTCGCGGTGGAGGGGGGCCTGGGAGACGAGGAGGACGAGGATGAGGAG 300
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GGGGAGTCGTACTTCGCCTTGACCTCGTCGAGGCTCTCGCGGGTGGACTACCTAGGGGAG 360
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      AGCACCAAGGGGGATTTGAACGTGCGGAGGGAGCATCTCGACGCGTTTGGTGGGAATGGC 420
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      AAGTCGACATTGCATGGCCCTATAGAGGAGATAGCTTGGCAAGAAGCGAGAGAAGCTGAA 480
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TCGTTGCTCCGTGAGTTGGGAATTGCAGATCCTTTTTCCGTAAGACACTCTCCTCGTGGA 540
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      ATATTTTGCACCAGGACACTAAATCTTCGATCCATCAGTGTCATTGGCTATGATATGGAC 600
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TATACATTGATTCACTACAATGTGATGGCTTGGGAAGGGCGTGCTTATGATTATGGTATG 660
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GCCAATCTGAAGGGCATGGGTTTCCCTGTAGATGACCTTGAATTTGATCCTGACCTGGTC 720
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      ATCAGGGGTCTAATTATGGATAAAGACAAAGGGAATTTGGTCAAAGCTGATCGTTTTGGT 780
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TACATTAAAAGGGCCATGCATGGCACCCAGATGCTTTCTACTAGTGCTGTGAGTGAAATA 840
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TATGGAAGAGAATTGGTGGATCTACGGAAAGAAAGTAGATGGGAGTTCCTTAATACCCTT 900
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TTCTCTGTGTCAGAAGCTGTTATGTTCATGCAGATGGTCGACAAGTTGGATCAGGGGTTG 960
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GTGCCAGCTGAACTTGGGCCACTGGATTACAAAGGACTGTACAATGCTGTTTCCAGGGCA 1020
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      CTTTTTCGAGCGCATGTAGAAGGTCAACTCAAGAGTGAGATAATGGCTGAGCCGGAACGA 1080
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TTTGTAGAGCCTGATCCTGAACTGCCTTTAGCTCTTCTGGATCAAAAGGAGGCTGGAAAA 1140
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      AGGTTGCTTCTTATTACAAACTCAGATTACCACTATACGAACAAAATGATGAATCATGCA 1200
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TTCAATCGCTTCCTTCCTAATGATATGGCATGGAGAGATCTGTTTGAAATGGTTATAGTC 1260
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TCTGCAAGGAAGCCAGAGTTTTTCCAAATCTCTCATCCGTTATACGAGGTTGTAACAAAT 1320
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GATGGATTAATGCGTCCCTGTTTTAAAGCTAATTCAGGTGGATTGTACTCTGGTGGCAGT 1380
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GCTCAGATGGTTGAGAAGTCACTAGACATCCATGGAGATGAAATATTATATGTGGGGGAT 1440
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      CATATTTACACAGATGTAAGCCAGTCTAAAGTTCATTTACGATGGAGGACAGCACTAATC 1500
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      TGCAGAGAACTAGAAGACGAGTTTGATGCACTAATTCGAAGCCATGTTCAGAAAGAACAG 1560
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      CTTATCACACTTATACAACAAAAGGAAGTCGTGGGAGATCTTTTTAACCAGCTTCGGCTG 1620
consensus_10797#1      ------------------------------------------------------------
                                                                                   

consensus_10797#0      GCTCTGCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGAT 1680
consensus_10797#1      -----GCAGAGACGAACAAATTCACGCCCAGCACAGACGCTTGCTGCTACTTGTATGGAT 55
                            *******************************************************

consensus_10797#0      GATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAA 1740
consensus_10797#1      GATCAGGAGCTTACAGAAAGTATGCAAAAGTTGCTCATTGTTATGCAGAGATTAGATGAA 115
                       ************************************************************

consensus_10797#0      AAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGAAAAATCATATTT 1800
consensus_10797#1      AAAATTGCACCAATGCTAGAATCAGATGGAGAGCTGTTCAATAAAAGA------------ 163
                       ************************************************            

consensus_10797#0      TAAAGGCCATGTTTCAGACCTCTCATTCAGAAAGATGGGGTTGGCTATCACGTACGGGCC 1860
consensus_10797#1      -----------------------------------TGGGGTTGGCTATCACGTACGGGCC 188
                                                          *************************

consensus_10797#0      TATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAA 1920
consensus_10797#1      TATGGGATAAGAGTCATCTGACGAGGCAAATTGAAAAATATGCTGATATATACACATCAA 248
                       ************************************************************

consensus_10797#0      GGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGC 1980
consensus_10797#1      GGGTTTCAAATTTTCTACATTATACTCCATTCATGTATTTCCAATCACAAGAACAGACGC 308
                       ************************************************************

consensus_10797#0      TTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCAT 2040
consensus_10797#1      TTGGGCATGACGTGCATTCCTATTCCCGGAGGCAACAACACTGACATTCGTTCGATTCAT 368
                       ************************************************************

consensus_10797#0      CATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACG 2100
consensus_10797#1      CATTCATGTGGTGGAGTTGGGAGAAAAATCGGTAGAGATAGAAAGGCAGCTGGATGGACG 428
                       ************************************************************

consensus_10797#0      TGCTTGTGCCAGTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAGGCCATTTG 2160
consensus_10797#1      TGCTTGTGCCAGTGTGTGAGCCGTGGCGATTGATCTTGATGCAGCGAGGCAGGCCATTTG 488
                       ************************************************************

consensus_10797#0      GAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAA 2220
consensus_10797#1      GAACGTTTTCGCGTTACGTAGCGATTATGTCGTGTATAGCTGTGTGTACTTGGGGTGTAA 548
                       ************************************************************

consensus_10797#0      GTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTT 2280
consensus_10797#1      GTAGAGTCATTAGCTTGTAATAACACGATTGGAATAAGCCCGTGCGGTCGTTTTCTTCTT 608
                       ************************************************************

consensus_10797#0      TCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGG 2340
consensus_10797#1      TCTGCTCGCCGACTCAAAAGAAATTTGGTTTGGTTAGGCAGAACGACCGTGGAAAGTTGG 668
                       ************************************************************

consensus_10797#0      GCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTG 2400
consensus_10797#1      GCATGTAATTTGTAAACTTTTAAGTTTTGTAAGATTTTCATCTGATCATCTCAGCATCTG 728
                       ************************************************************

consensus_10797#0      TCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTCCAT 2460
consensus_10797#1      TCTAAACTCTGGACTGTCACTTGAAACAGTTAAATTCCAGAAAAATAAGAAGAAGTC--- 785
                       *********************************************************   

consensus_10797#0      TGTT 2464
consensus_10797#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)