cluster # 1080

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Oryza sativa
cluster # 1080 cluster # 1080 Sequences # 2 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_1080#0 length = 615 sequences # 2

consensusID : consensus_1080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 615
fasta sequence

                              [AGCGTCGTCGCCGCGTTCGTCTTCTCTGTCCACCGCCGGCAGCCGCTCCAGCCGCCCCTAGCAGTCGCCTCGTCCCCAACCTGTGCCGCCACCTCCCTCGGCATCGCAGCACCGAGGAGAAGCCCGTCCACCCCTCCGTTGCCGCTGCTCGTCGCCGGAAAGTCGCCGTCGTCGTCGTCCCGACTTCGCCGCCGTTCGGAGCTCGTCGCTGGTCGTCTTCCATCGTCGTTCGTCGTCGTGCCGCCCCTTGCCTGGACGTAGGGTTGTGCGAGGCTAAGGCCTCGGGCTGATGGCAAGAGACGGAGCAAGGCCTCGGGCTGACGGCAAGAGACGTTGCCTAGGGCTGCTTCAACCGAAATCAAAAGAGATGAACTCGGGAAATTGTGTATCGGTCAGTTGTAAGGCAACATCTACAACTTCCAGGAGGTGAAGGTTGAACAATAATTATATCAAGAATAAGGACTATCATGCGCAGGAGAGTGTTGAAGAGAAGCCCTTGTCGGTACGCTTGCGTATCCAACAAGATGATCGGAGTGCGGTCTGGTTCTAGGTCTCGTTCCCCAGTCGACTGCCTGTGGCATGTTAACCGGGCCCTTATATTATTTGGTCTTCCGC]

[+] EMBL CB638416             [AGCGTCGTCGCCGCGTTCGTCTTCTCTGTCCACCGCCGGCAGCCGCTCCAGCCGCCCCTAGCAGTCGCCTCGTCCCCAACCTGTGCCGCCACCTCCCTCGGCATCGCAGCACCGAGGAGAAGCCCGTCCACCCCTCCGTTGCCGCTGCTCGTCGCCGGAAAGTCGCCGTCGTCGTCGTCCCGACTTCGCCGCCGTTCGGAGCTCGTCGCTGGTCGTCTTCCATCGTCGTTCGTCGTCGTGCCGCCCCTTGCCTGGACGTAGGGTTGTGCGAGGCTAAGGCCTCGGGCTGATGGCAAGAGACGGAGCAAGGCCTCGGGCTGACGGCAAGAGACGTTGCCTAGGGCTGCTTCAACCGAAATCAAAAGAGATGAACTCGGGAAATTGTGTATCGGTCAGTTGTAAGGCAACATCTACAACTTCCAGGAGGTGAAGGTTGAACAATAATTATATCAAGAATAAGGACTATCATGCGCAGGAGAGTGTTGAAGAGAAGCCCTTGTCGGTACGCTTGCGTATCCAACAAGATGATCGGAGTGCGGTCTGGTTCTAGGTCTCGTTCCCCAGTCGACTGCCTGTGGCATGTTAACCGGGCCCTTATATTATTTGGTCTTCCGC]
[+] EMBL CB641261             [AGCGTCGTCGCCGCGTTCGTCTTCTCTGTCCACCGCCGGCAGCCGCTCCAGCCGCCCCTAGCAGTCGCCTCGTCCCCAACCTGTGCCGCCACCTCCCTCGGCATCGCAGCACCGAGGAGAAGCCCGTCCACCCCTCCGTTGCCGCTGCTCGTCGCCGGAAAGTCGCCGTCGTCGTCGTCCCGACTTCGCCGCCGTTCGGAGCTCGTCGCTGGTCGTCTTCCATCGTCGTTCGTCGTCGTGCCGCCCCTTGCCTGGACGTAGGGTTGTGCGAGGCTAAAGCCTCGGGCTGATGGCAAGAGACGGAGCAAGGCCTCGGGCTGACGGCAAGAGACGTTGCCTAGGGCTGCTTCAACCGAAATCAAAAGAGATGAACTCGGGAAATTGTGTATCGGTCAGTTGTAAGGCAACATCTACAACTTCCAGGAGGTGAAGGTTGAACAATAATTATATCAAGAATAAGGACTATCATGCGCAGGAGAGTGTTGAAGAGAAGCCCTTGTCGGTACGCTTGCGTATCCAACAAGATGATCGGAGTGCGGTCTGGTTCTAGGTCTCGTTC                                                        ]




>consensus_1080#0
AGCGTCGTCGCCGCGTTCGTCTTCTCTGTCCACCGCCGGCAGCCGCTCCAGCCGCCCCTA
GCAGTCGCCTCGTCCCCAACCTGTGCCGCCACCTCCCTCGGCATCGCAGCACCGAGGAGA
AGCCCGTCCACCCCTCCGTTGCCGCTGCTCGTCGCCGGAAAGTCGCCGTCGTCGTCGTCC
CGACTTCGCCGCCGTTCGGAGCTCGTCGCTGGTCGTCTTCCATCGTCGTTCGTCGTCGTG
CCGCCCCTTGCCTGGACGTAGGGTTGTGCGAGGCTAAGGCCTCGGGCTGATGGCAAGAGA
CGGAGCAAGGCCTCGGGCTGACGGCAAGAGACGTTGCCTAGGGCTGCTTCAACCGAAATC
AAAAGAGATGAACTCGGGAAATTGTGTATCGGTCAGTTGTAAGGCAACATCTACAACTTC
CAGGAGGTGAAGGTTGAACAATAATTATATCAAGAATAAGGACTATCATGCGCAGGAGAG
TGTTGAAGAGAAGCCCTTGTCGGTACGCTTGCGTATCCAACAAGATGATCGGAGTGCGGT
CTGGTTCTAGGTCTCGTTCCCCAGTCGACTGCCTGTGGCATGTTAACCGGGCCCTTATAT
TATTTGGTCTTCCGC

clustalw multiple alignements is not computed in this case