These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10811#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1386 fasta sequence [AGTATTACACCACCCAACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAG-AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC-CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCAC-TGCACTGCAAAGCGTGCGCGGGCAAAG-TGAAGAAGCACC-TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC-GC-TGGG-GGTGCTGAACAGCG-TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT-CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC-TTTCACTGCAAGTCTGCAATACTGCATTATTGTTGTGTCGTACTGCAACTGTAGGTGGTGATCGCGTAGGTTGAGGTGGGATCGAGATCCTCTGCCTTCAAAACACCATACTTTTATCGCTGAAAGGTGAACCTATGATTCATCAAGTTCATATGTCAGTGATAAAGACATGTACATTTGAAGGTAGAGGAACATGATCCGTTGTGGTGGTGAGTAAACAGCAGCATCAGCCTAATTTGCTTGCAAGGTCAATAACATTTTTTAGATCAATAACATGTAGTAGCAGAACTCTCAAATGGAAAATAATGATTTATCCCTAGTACAATAAAAA] [+] EMBL AK070263 [AGTATTACACCACCCAACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCAC TGCACTGCAAAGCGTGCGCGGGCAAAG TGAAGAAGCACC TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC GC TGGG GGTGCTGAACAGCG TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC ] [+] EMBL AU183870 [ ACACAAGCTCAGCCAGTTTACCACTCACACTAGCTGAGCTAGNAACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCAGCCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAG ] [+] EMBL C74796 [ TTTACCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCA CCGATGGTCCGGCCACACAAGGGCGGCGCCATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGACGGCTCATCCA ] [+] EMBL AU030220 [ CCACTCACACTAGCTGAGCTAG AACTCACCACTCACTGCAGTTGCAGCATGGCGCCTTTGCTGTTCAAGGACATGAAGAGCCTCTCGTGCTCGTCGCCGGCGTCCACGGCGATATGCCCGAGCTTGGAGCGGCA NCGATGGTCCGGCCACACAAGGGCGGCG CATTGCTGCGAGCCCTCTCTGCCAGGTCCCCGGTGAGCCAAGAACGGTTCACAGGCAAGACTGCAGGAGAGGGCAGCAG ATCAG ACAAGGCGGCTG CGCGAATGGC GCGAGCTCGTCAG CCCGCCGGCTCATCCAGGTA CTGCTCA NA CCGCGCGCG CGCCGa ] [+] EMBL C72789 [ ACAGGCAAGACTGCAGGAGAGGGCAGCAGCATCAGCACAAGGCGGCTGCCGCGAATGGCGGCGAGCTCGTCAGCCCCGCCGGCTCATCCAGGTACCTGCTCAGCAGCCGCGC CGCCGCCGCCGAGGAGATCCAGGAGGTGGAGGCTTCGGCTGCTCCGGCCGTCGATGCCAAGGTGGTCAGGGAAGAGCAAGCTGGTAGTGATGTGAAGAACACTCTGACGCAGGAGCAGGTGGTTGTACTGAAGGTATCACTTGCACTGCAAAGCGTGCGCGGGCAAAGTTGAAGAAGCACCTTCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGCTTTCGCGGCGAAGAAGGTTACGGTTGTCGGCGACGTTACGCC GCTTGGG GGTGCTTAACAGCGTTTTCCAAGGTGAAGAACG CCANTTTTNGGGGGCGCC NCGGCGATA ] [+] EMBL AU094074 [ nTGGTTGTACTGAAGGTATCAC TGCACTGCAAA CGTGCGCGGGCAAAG TGAAGAAGCACC TCGCCAAGATGGAAGGAGTGACATCTTTCAACATAGACTTCGCGGCGAAGAAGGTGACGGTGGTCGGCGACGTGACGCC GN TGGG GGTGCTGAACAGCG TGTCCAANGTGAAGAACGCCCAGTTCTGGGCGGC CCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCGGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAAC TTTCACTGCAAaaaaa ] [+] EMBL CA765284 [ cgggagGAAGGGA GCCGGG AGGGAGAGGCTGAACAGCG TGTCCAAGGTGAAGAACGCCCAGTTCTGGGCGGCGCCGCCGGCGATAGCCGCCTGATGAGAGATGAAAACGCATAGGATCCTCTCTGGTTAATTAGGTGCTGAAGCATGTGGGT CACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGTGCGTCGTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCTTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAACGTTTCACTGCAAGTCTGCAATA ] [+] EMBL AU030221 [ GCATGTGGGTCCACTGATGCTGGACCAGCTCGCTCTGCTGTCTGTGTGATGGTGGTGGTGGTGTCTCCTAGATCGATGAGAGCATGCGTGTGTGTGCGCGTCNTCCTGACTGATCCTGAAGCAAAGCATGCAGATGCAGCTTTGCCTCTTACTGTGATCCTTTTGGTTTCTTGTGGTTGGCACCATGCTGAGCTACATGCCCGTCACTGTGCTTCTTCTTCCGTAGACTGATGAGAGTGTTTGTGACTATATATCTGCTCTAAGTGTAAGTGGTGGTGTTGTTCTTTTGCATGCTCTTACTGTAATATAAACGTTTCACTGCAAGTCTGCAATACTGCATTATTGTTGTGTCGTACTGCAACTGTAGGTGGTGATCGCGTAGGTTGAGGTGGGATCGAGATCCTCTGCCTTCAAAACACCATACTTTTATCGCTGAAAGGTGAACCTATGATTCATCAAGTTCATATGTCAGTGATAAAGACATGTACATTTGAAGGTAGAGGAACATGATCCGTTGTGGTGGTGAGTAAACAGCAGCATCAGCCTAATTTGCTTGCAAGGTCAATAACATTTTTTAGATCAATAACATGTAGTAGCAGAACTCTCAAATGGAAAATAATGATTTATCCCTAGTACAATAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||