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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10837#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2354 fasta sequence
[AAAAAAAGTCGAATCGACAAGCAAACAAGCTAGCTGCGCCACGGCGAAGTGATGCAAACACCATGCTTCGTGAGCCTTTCCACTGTTTCACTCTGCTCCTGCTCCTCCTCGCGGCTGCCGACCGCTGCGCCGCGGCCACCGGCGGCAGCGGCGGCCTGCAGTTCGCGTACGATGGCTTCTCGGGCGCCAACCTCACCCTCGACGGCGCGGCCACGGTCACGGCGAGCGGCCTCCTCATGCTGACCAACGGGTCCATCCAGATGAAAGGCCACGCGTTCCACCCGTCGCCGCTCCCGCTCCGCGCGGCGAGGTCCTTCTCGACGACGTTCGTGTTCGCCATCTTCGGGCAGTACGCCGACTTCAGCAGCCACGGCCTGGCCTTCTTCGTCTCCGCGTCCGCGGACGCGTTCGCCGCCGCGCTGCCTGGCCAGTTCCTGGGCCTCTTCAACGGCACCGGCGCCACCACCGGCAACCGGAGCGCCGCCGGCGTCTTCGCCGTGGAGTTCGACACGCTCTTCAACGCCGAGTTCCACGACCTGAACAGCAACCACGTCGGCGTCGACGTCAACAGCCTGACGTCGGTCAAGGCCGCCGACGCCGGCTACTACGATGACGTCACCGGCCAGTTCCGGAACCTGACCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCCCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCAAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTCGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGATGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA-ATCGT-GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG-CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC-TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAAAAAAAGGCACACATCAGATACTCCCAAAGTAGGGCCAAAAATGGTGCTTGTAGCATTGCAGTTAAGAGTATGTTAACGGTGTAACTAGATGCTTTAACTATCTTGTTCTCCTTGTACTATGAAATCGAGATTCTTCTGTCTTGATTA]
[+] EMBL AK105111 [AAAAAAAGTCGAATCGACAAGCAAACAAGCTAGCTGCGCCACGGCGAAGTGATGCAAACACCATGCTTCGTGAGCCTTTCCACTGTTTCACTCTGCTCCTGCTCCTCCTCGCGGCTGCCGACCGCTGCGCCGCGGCCACCGGCGGCAGCGGCGGCCTGCAGTTCGCGTACGATGGCTTCTCGGGCGCCAACCTCACCCTCGACGGCGCGGCCACGGTCACGGCGAGCGGCCTCCTCATGCTGACCAACGGGTCCATCCAGATGAAAGGCCACGCGTTCCACCCGTCGCCGCTCCCGCTCCGCGCGGCGAGGTCCTTCTCGACGACGTTCGTGTTCGCCATCTTCGGGCAGTACGCCGACTTCAGCAGCCACGGCCTGGCCTTCTTCGTCTCCGCGTCCGCGGACGCGTTCGCCGCCGCGCTGCCTGGCCAGTTCCTGGGCCTCTTCAACGGCACCGGCGCCACCACCGGCAACCGGAGCGCCGCCGGCGTCTTCGCCGTGGAGTTCGACACGCTCTTCAACGCCGAGTTCCACGACCTGAACAGCAACCACGTCGGCGTCGACGTCAACAGCCTGACGTCGGTCAAGGCCGCCGACGCCGGCTACTACGATGACGTCACCGGCCAGTTCCGGAACCTGACCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCCCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGTGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCAAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTCGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGATGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCTGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCGGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTTTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAATTATAATGGACTGT ]
[+] EMBL CB685293 [ ACCTCATCATGATCAGCCGGAAGCCCATGCAGGCGTGGGTGGACTACGACGGCGGGAGCACGGAGGTCACCGTGGCCATGGCTCCCCTGGGCACGGCCAGGCCCAAGAAGCCGCTGCTGCGGACCAACGTCGACCTCTCCGACGTCGCGACGGGCGCGGCGCACGTCGGGTTCGCGTCGGCGACGGGCATCCTCTTCTCGCGCCACTTCGTGCTAGGCTGGAGCTTCGCGGTGGACGGGCCAGCCCCGCCGCTGAACATCTCGTCGCTACCGCCGTTGCCGCGGGCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACCAGAACCTCCTTGGCATGGGAGGGTTCGGGAGCGTGT ]
[-] EMBL CB625707 [ GCTTGGCCCAAGCCGCGGTCGAAGGTGCTGGAGATCGTGCTGCCCATAGCGTCGGCGGCGCTGGTCGCCGCCGTGGCCATGGCGGTGTACGCCATGGCGAGGCGGCGGCTCAGGTACGCCGAGCTGCGGGAGGAGTGGGAGACCGCGTTTGGGCCGCACCGATTCTCCTACAAGGACTTGTTCCATGCGACCAAGGGATTCAGCGACAAGAACCTCCTTGGCACGGGAGGGTTCGGGAGCGTGTACCGAGGCGTGCTCCGCAAGCCCGACATGGAGGTCGCAGTGAAGAGGGTGTCACACGAATCGAGACAAGGGATGAAGGAGTTCGTCGCAGAGGTCGCGAGCATCGGTCGCTTGCGACACCGCAACCTTGTGCAACTACTCGGCTATTGCCGTCGTAAAGGTGAACTTCTCTTGGTGTACGATTACATGCCAAAAGGTAGCCTCGACAAATACCTTTACGATGGAAGCAAGCACCCACTAAGTTGGCCTCAGAGATTCCACATCATCAGAGGAGTGGCGTCTGGGCTACTGTACCTTCACGAGGATTGGGAACACGTTGTCATCCACCGAGACGTCAAGGCAAGCAACGTGCTCCTCGACGGTGAGATGAACGGTCGACTAGGCGACTTTGGCCTCGCAAGGTTGTATGATCACGGAGCTGTTGCACAGACAACACATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGC ]
[+] EMBL CF197340 [ CATGTGGTCGGCACTATGGGGTACCTAGCCCCTGAGTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCNNNAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATANGNNNNATCGGGTTTC NNNGTTTATTACTTCTAGTTTA ]
[-] EMBL CB685294 [ GTTGGGGCACACCGGCAAGGCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCCTCGAGGTCACCTGCGGAAGAAGGCCA ATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCTGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCGGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTTTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAATTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAAAAAAAGGCACACATCAGATACTCCCAAAGTAGGGCCAAAAATGGTGCTTGTAGCATTGCAGTTAAGAGTATGTTAACGGTGTAACTAGATGCTTTAACTATCTTGTTCTCCTTGTACTATGAAATCGAGATTCTTCTGTCTTGATTA]
[+] EMBL BM419187 [ GGGCACACC GCAA GCAACCCCATCAACCGACGTGTTCGCGTTCGGCGCATTCCTCTGCGAGGTCACCTGCGGAAGAA GCC ATCGTGGCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAGCCAAGGGTGCACTTGTTAACGTGGT GACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGT CCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAACCAGTTGGTGAGGATATGAAAAATCGGGTTTCNNCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATCCCCNGTTTAGGGGGCTAAAAATTCAAAAA ]
[+] EMBL BI812360 [ GCGCATTCCTCCTCGAGGTCACCTGCGGAAGAA GCCACATCGT GCAGGATGAGCACGGCAACCGTGCCGTGCTTGTGGACTGGGTGACTGAGCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCC ATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACCAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAA ]
[+] EMBL BM419671 [ GTGGACTGGGTGACTGACCAGTGGAG CAAGGGTGCACTTGTTAACGTGGTGGACGCGAGGATTCCGAGCGGTTTTGATCCTGACGAGGTTTCTCTGGTTCTAAAACTTGGGCTGCTCTGCTCGCATCCATTGCCCAATGCTAGGCCAACAATGCGGCAGGTCGCTCAGTACCTCGACGGTGATATGGCCCTACCGGATTTGTCACCGACGTACCTAAGCTTCACTTCACTAGAGCGGATGTACAAGGAGTTCAACCGCAATTCCATTTCATACATCTCATCAGCAAGCATGGGTGCCATTTCTGATATCTCAGGAGGAAGGTGACAAAGGAAGGGAGCTCGTGATTCTGAGAAGCAGTTGGTGAGGATATGAAAAATCGGGTTTC TCAGTTTATTACTTCTAGTTTATTTTCTGAGTTATAATGGACTGTTTAGGGGGCTAAAAATTCAAAAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||