These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10843#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 2681 fasta sequence [ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGTCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA] [+] EMBL AK101523 [ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCATCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCA ] [+] EMBL AK106430 [ CACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGTCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCA ] [+] EMBL CB666709 [ GAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCCGCGCGTCnt ] [+] EMBL CB639383 [ AGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGGCGGGGCTGGATCTCTGGAAGGAAGGGCCACTGGTGCACATCG ] [+] EMBL CB648421 [ CGTCGGCGACTTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCC ] [-] EMBL CB648422 [ ACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA] [-] EMBL CB666710 [ CTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTT ] consensusID : consensus_10843#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 411 fasta sequence [GCTGTCCGGCTCCGTCGCGCTCCCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTCCTGGTTTACAGACGATCCAAGTCAAACTGTTTTAAATTTTGATCAAAGTTTTATAGGAAAAAAATAATAATAACATTTTCAACTAAGACCAATTTGTTATAAATATATATTCAATTATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTAGTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGTAAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAGTAAATGTTGTTCTAAGATCAAAAAA] [+] EMBL BI812618 [GCTGTCCGGCTCCGTCGCGCTCCCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTCCTGGTTTACAGACGATCCAAGTCAAACTGTTTTAAATTTTGATCAAAGTTTTATAGGAAAAAAATAATAATAACATTTTCAACTAAGACCAATTTGTTATAAATATATATTCAATTATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTAGTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGTAAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAGTAAATGTTGTTCTAAGATCAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10843#0 ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGG 60 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAG 120 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGC 180 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 CGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGG 240 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACT 300 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGT 360 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACA 420 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCG 480 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCG 540 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACG 600 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCA 660 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCG 720 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 CGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGT 780 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGT 840 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 CGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGG 900 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCG 960 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCG 1020 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACC 1080 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACG 1140 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGC 1200 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCG 1260 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 CCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGA 1320 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCC 1380 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGT 1440 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCT 1500 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACG 1560 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCG 1620 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCA 1680 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCA 1740 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCA 1800 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCG 1860 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGG 1920 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 TGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGC 1980 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 CCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGA 2040 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCA 2100 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 GCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGG 2160 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGG 2220 consensus_10843#1 ------------------------------------------------------------ consensus_10843#0 AGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGC 2280 consensus_10843#1 ----------------------------GCTGTCCGGCTCCGTCGCGCTCC-CCACATGC 31 ***** * *************** ******** consensus_10843#0 TCATCATGCCCAAGTTCCAAGGACCCGAGAT-ATCTCCAATTGTGGG--GATCTTGACAA 2337 consensus_10843#1 TCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTC 91 ***************************** * * * **** * ** ** ** consensus_10843#0 GGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGA 2397 consensus_10843#1 CTGGTTTACAGACGATCCAAGTCAAACT-GTTTTAAATTTTGATCAAAGTTTTATAGGAA 150 * ** ** ** ** * * * * * * * * * consensus_10843#0 AAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAA 2457 consensus_10843#1 AAAAATAATAATAACATTTTCAACTAAGA-CCAATTTGTTATAAATATAT---ATTCAAT 206 *** * * * * * * * *** *** * * * * * * * *** consensus_10843#0 TATCAGAGTCACCTG-CATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTT 2516 consensus_10843#1 TATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTA 266 *** * * * * *** ** ** * * * * *** * * * *** consensus_10843#0 TTCAGTT---ATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGA 2573 consensus_10843#1 GTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGT 326 *** * * * ** ** * * ** * *** * * **** *** * consensus_10843#0 GAGTGCTTGAATAATTGCTGCCAATGTAAAATCACAC-ATGTAACTATGCCAGATGTAAT 2632 consensus_10843#1 AAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAG 386 *** *** ** * * * ** ** ** * * ** ** *** ** consensus_10843#0 CAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA 2681 consensus_10843#1 TAAATGTTGTTCTAAGATCAAAAAA------------------------ 411 *** * * * ** * ** |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||