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Oryza sativa
cluster # 10843 cluster # 10843       Sequences # 8       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10843#0 length = 2681 sequences # 7  
 consensus_10843#1 length = 411 sequences # 1  
consensusID : consensus_10843#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2681
fasta sequence 
                              [ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGTCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA]

[+] EMBL AK101523             [ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCATCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCA                 ]
[+] EMBL AK106430             [   CACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGTCGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGGTGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCGTCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCGAGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCGAGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGGTGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCA                 ]
[+] EMBL CB666709             [                           GAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGGAGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAGTCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGCCGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGGTCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACTGGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCGCGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGTGGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCCGCGCGTCnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CB639383             [                                                                                                                                                                                                                                                                                                              AGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGTTCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACATCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCGGTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCGTCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACGGCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCATCTGCGCGGTGTCGGCGGGGCTGGATCTCTGGAAGGAAGGGCCACTGGTGCACATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB648421             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTCGGCGACTTCGCCGTCCGGTACCACGCCGGCGACCTCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACGTCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGCTCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCGCCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGAGCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCCTCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGTTCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCTTCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACGGCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCGTGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCATCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCATCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCAAGGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CB648422             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGGGTTCCCGGTGCTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA]
[-] EMBL CB666710             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGGACCGGCCGCGGCCCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGAAGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCAGCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGGAGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGGAGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATATCAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCAGTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCTTGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTT       ]




>consensus_10843#0
ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGG
AGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAG
TCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGC
CGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGG
TCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACT
GGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGT
TCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACA
TCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCG
GTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCG
TCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACG
GCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCA
TCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCG
CGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGT
GGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGT
CGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGG
TGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCG
TCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCG
AGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACC
TCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACG
TCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGC
TCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCG
CCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGA
GCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCC
TCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGT
TCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCT
TCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACG
GCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCG
TGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCA
TCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCA
TCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCA
AGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCG
AGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGG
TGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGC
CCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGA
AGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCA
GCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGG
AGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGG
AGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGC
TCATCATGCCCAAGTTCCAAGGACCCGAGATATCTCCAATTGTGGGGATCTTGACAAGGC
AGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGAAAA
CACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAATAT
CAGAGTCACCTGCATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTTTTCA
GTTATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGAGAGTGCT
TGAATAATTGCTGCCAATGTAAAATCACACATGTAACTATGCCAGATGTAATCAAAAGGG
ACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA

consensusID : consensus_10843#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 411
fasta sequence 
                              [GCTGTCCGGCTCCGTCGCGCTCCCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTCCTGGTTTACAGACGATCCAAGTCAAACTGTTTTAAATTTTGATCAAAGTTTTATAGGAAAAAAATAATAATAACATTTTCAACTAAGACCAATTTGTTATAAATATATATTCAATTATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTAGTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGTAAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAGTAAATGTTGTTCTAAGATCAAAAAA]

[+] EMBL BI812618             [GCTGTCCGGCTCCGTCGCGCTCCCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTCCTGGTTTACAGACGATCCAAGTCAAACTGTTTTAAATTTTGATCAAAGTTTTATAGGAAAAAAATAATAATAACATTTTCAACTAAGACCAATTTGTTATAAATATATATTCAATTATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTAGTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGTAAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAGTAAATGTTGTTCTAAGATCAAAAAA]




>consensus_10843#1
GCTGTCCGGCTCCGTCGCGCTCCCCACATGCTCATCATGCCCAAGTTCCAAGGACCCGAG
GTCAGCGCCAAACACAGACTGAATTTTACTCCTGGTTTACAGACGATCCAAGTCAAACTG
TTTTAAATTTTGATCAAAGTTTTATAGGAAAAAAATAATAATAACATTTTCAACTAAGAC
CAATTTGTTATAAATATATATTCAATTATTGGTTTGATGAAACTTATTTAGTATTATAAA
TATTATCATATTTGTGTATGAATTTAGTCAACTTAAAGCAGTTTAACTTTGATTAAAGTC
AAGCGTCTTATAATCTGAAACAGAGTAAGTATTTGTTTATTAATTTACTTATTATTTTCC
AACTACATTCCTGGATCACATGCAAGTAAATGTTGTTCTAAGATCAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10843#0      ACACACATATCTCATCTTGTTGTTTCTGAGCTGCTCCAAGAAGCAGAGCTCTGTCCATGG 60
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGGAGGAGCAGAGCCCGAGGCTCGCCGCCGGCGAGCCGGAGCGCAAGCTCGAGGACGGAG 120
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCACCGACGCCGAGGACCCCGGGTGCACGGGCAATGCGGCCATGAGCTCGCTGGAGCAGC 180
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      CGCTTCTGAAGCGGAGCAACACGCTAACGGCCAGCCACCTCGCCATGGTTGGCGCCAAGG 240
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCTCCCACATCGAGAGCCTCGACTACGAAATTATCGAGAATGATCTGTTCAAGCACGACT 300
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GGAGGAGGCGATCGAACGTGGAGGTGCTGCAGTACATCTTCCTCAAGTGGGCCATGGCGT 360
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCCTCGTCGGCCTCCTCACCGGCGTCATCGCGTCGCTCATCAACCTCGCCATCGAGAACA 420
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCTCCGGCCTCAAGATGCTCCACATGGTGCAGCTCGTCCGCAAGAAAAGATACTGGGCCG 480
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GTTTCTTGTATTTCGCCGGCGTCAACTTCGGCCTGACGTTCATCGCCGCCATGCTCTGCG 540
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCGTCTTCGCCCCGACCGCCGCCGGCCCCGGCATCCCGGAGATCAAGGCCTACCTCAACG 600
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GCGTCGACACGCCCAACATGTTCGGCGCGCCGCAGCTCATTGTCAAGATCATCGGTAGCA 660
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCTGCGCGGTGTCGTCGGGGCTGGATCTCGGGAAGGAAGGGCCACTGGTGCACATCGGCG 720
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      CGTGCCTGGCGAACTTGCTGAGCCAGGGCGGCTCCGGCCGGCACCGCCTCCGGTTGCGGT 780
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GGCTGCGCTACTTCGACAACGACCGCGACCGGCGCGACCTGATCACCTGCGGCGCGTCGT 840
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      CGGGCGTGTGCGCGGCGTTCCGGGCGCCCGTCGGCGGCGTGCTGTTCGCGCTGGAGGAGG 900
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TGGCGACGTGGTGGCGGAGCGCGCTGCTGTGGCGCACCTTCTTCAGCACGGCCACCGTCG 960
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCGTCGTCCTCCGCGGGTTCATCGAGGTGTGCAGGAACGGGCGGTGCGGTCTGTTCGGCG 1020
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGGGCGGGCTCATCCTGTTCGACGTCGGCGACGTCGCCGTCCGGTACCACGCCGGCGACC 1080
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCCTCCCGGTGACCATCGTCGGCGTGCTTGGCGGCGTCCTCGGCGCGCTGTACAACCACG 1140
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCCTCCACAAGGTGCTCCGCGTGTACAACCTCATCAACGAGAAGGGCCGCGCCGCGAAGC 1200
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCGCCCTGGCGCTCGCCGTGTGCGCGCTCACGTCGGCGCTGCTGTACGTGACGCCGTTCG 1260
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      CCGTGCCGTGCACGCCGTGCGACCCGGCGTTCGGCGGCGCGTGCCCGACGCTGGGGAAGA 1320
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GCGGCAACTTCAAGCGGTTCAACTGCCCCGAGGGCCACTACAACGACCTCGCCACCCTCC 1380
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCCACGCCACCAACGTCGACGCGACGCGGAACATCTTCTCCACGGGCACCGCCGGCGAGT 1440
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCAGGCTCGACTCGCTGCTCATCTTCTTCGCCGTCTACTGCGTCCTGGGCCTCTTCACCT 1500
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCGGCATCGCCGTCCCCTCGGGGCTCTTCCTCCCCATCATCCTCATGGGCTCCGCCTACG 1560
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GCCGCGTCACGGCGCTCGTGCTGTCGCGGTTCGCCCGCATCGACCACGGCCTATACGCCG 1620
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TGCTCGGCGCGGCGGCGCTCATGTCGGGGTCCATGCGGATGACCGTGTCGCTCGTCGTCA 1680
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCTTCCTCGAGCTCACCAACAACCTCCTCCTCCTCCCAATCACCATGTTCGTCCTCCTCA 1740
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TCGCCAAGACCGTCGGCGACGCGTTCAACCCCAGCATCTACGAGATCATCCTCGACCTCA 1800
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGGGCCTCCCGTTCCTGGAGGCGAAGCCGGAGCCGTGGATGAAGGACCTCACCGTCGGCG 1860
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGCTCGCCGCCGCCAAGCCCCGCGCCGTGGCGCTCCAGGTGGTGGAGCGCGTGTCCACGG 1920
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      TGGTGGAGGCGCTCCGGGCGACGCGGCACAACGGGTTCCCGGTGCTGGACCGGCCGCGGC 1980
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      CCGGGGTATCGGAGCTGCACGGGCTGGTGCTCCGGTCGCACCTCGTCGCCGCGCTGAGGA 2040
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGCGGTGGTTCCTGCCGGAGAGGAGGAGGACGGAGGAGTGGGAGGCCCGCGAGATGTTCA 2100
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      GCTCGGCGGAGCTCGCGGACAAGTGCGGCGGCGTGGACGAGCTGGAGATCTCGCCGGAGG 2160
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGATGGGGATGTACGTGGACCTCCACCCGCTGACGAACACGACGCCGTACACCGTGGTGG 2220
consensus_10843#1      ------------------------------------------------------------
                                                                                   

consensus_10843#0      AGACCATGTCGGTGGCGAAGGCCGTCGTGCTGTTCCGCTCCGTCGCGCTCCGCCACATGC 2280
consensus_10843#1      ----------------------------GCTGTCCGGCTCCGTCGCGCTCC-CCACATGC 31
                                                   ***** * *************** ********

consensus_10843#0      TCATCATGCCCAAGTTCCAAGGACCCGAGAT-ATCTCCAATTGTGGG--GATCTTGACAA 2337
consensus_10843#1      TCATCATGCCCAAGTTCCAAGGACCCGAGGTCAGCGCCAAACACAGACTGAATTTTACTC 91
                       ***************************** * * * ****     *   **  ** **  

consensus_10843#0      GGCAGGACCTGATAGCACACAACATCCTCGGTGCATTTCCACACCTTGCAAGCAAGAGGA 2397
consensus_10843#1      CTGGTTTACAGACGATCCAAGTCAAACT-GTTTTAAATTTTGATCAAAGTTTTATAGGAA 150
                               * **     **   **  ** * *  *  *    * *        *   * *

consensus_10843#0      AAACACATTGAGAGGAACCATTTTTGAGAGTTAATCCATCTTTATTGTCTTGAAGCCAAA 2457
consensus_10843#1      AAAAATAATAATAACATTTTCAACTAAGA-CCAATTTGTTATAAATATAT---ATTCAAT 206
                       *** * * * * *  *        * ***   ***   *  * * * * *   *  *** 

consensus_10843#0      TATCAGAGTCACCTG-CATATACAGCTTTTATGAGGCTTTGAGTTTTTTTTCTTTTTTTT 2516
consensus_10843#1      TATTGGTTTGATGAAACTTATTTAGTATTATAAATATTATCATATTTGTGTATGAATTTA 266
                       ***  *  * *     * ***  **  **    *   * * *  *** * * *   *** 

consensus_10843#0      TTCAGTT---ATCCTCTTCTCTGTAAGTAGATTCAGGATTATTATTTGCTGCTCTTCTGA 2573
consensus_10843#1      GTCAACTTAAAGCAGTTTAACTTTGATTAAAGTCAAGCGTCTTATAATCTGAAACAGAGT 326
                        ***  *   * *   **  ** * * ** * *** *  * ****   ***       * 

consensus_10843#0      GAGTGCTTGAATAATTGCTGCCAATGTAAAATCACAC-ATGTAACTATGCCAGATGTAAT 2632
consensus_10843#1      AAGTATTTGTTTATTAATTTACTTATTATTTTCCAACTACATTCCTGGATCACATGCAAG 386
                        ***  ***  ** *   *  *    **   **  ** *  *  **    ** *** ** 

consensus_10843#0      CAAAAGGGACACAACCATGATGCAATAGAGCAATTCTTTTTTAAAGAGA 2681
consensus_10843#1      TAAATGTTGTTCTAAGATCAAAAAA------------------------ 411
                        *** *     * *  ** *   **


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)