These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10849#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1185 fasta sequence [CCGCCTCGGGGTCTTCGCCGAAGAAGCTAAGCTTCTTCCTTCTTCTTCTTGCCCATGGAGGCCGCGGCGGCGGCGGCGTCGGCGGCGCCGCACCTGCTGCACTGCGGTGGCTTCGGCCGTCTGCCTGGTCTCGCGGCGTCGCTGCCGGGCCGTCGGCGCCGGCGCCCATCCCGCCGCGTCCTCGCCGTCGCCACGGAGCCCAAGCCCTCCGCCTCCGCCCCGGCGCCTCGCTCCAGGTCGAGGACGAGGACCCCTAATGACATCTCCTCCACCCGGTTCGGGGAGGTGTCCAAGGAGATCCAGCGAGTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATGTTGTTGGCCTAGTAGATGAGTGGGCTGCTCGATTTTTCGAAGAACTTGATTATGTGAATGAAGGAGAAAATGGCAATCGCTTTGCTGAAATGATGAAAAAGGATCTTCCGCAGGTCGTTGTACCAAAGACATACCAGAAATACCCATCTAGAAAAGTTCTTACTACACAATGG] [+] EMBL CB674303 [CCGCCTCGGGGTCTTCGCCGAAGAAGCTAAGCTTCTTCCTTCTTCTTCTTGCCCATGGAGGCCGCGGCGGCGGCGGCGTCGGCGGCGCCGCACCTGCTGCACTGCGGTGGCTTCGGCCGTCTGCCTGGTCTCGCGGCGTCGCTGCCGGGCCGTCGGCGCCGGCGCCCATCCCGCCGCGTCCTCGCCGTCGCCACGGAGCCCAAGCCCTCCGCCTCCGCCCCGGCGCCTCGCTCCAGGTCGAGGACGAGGACCCCTAATGACATCTCCTCCACCCGGTTCGGGGAGGTGTCCAAGGAGATCCAGCGAGTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAATTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATTTCTGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATACTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAAAAACTTTGTGATAACGTTCCTTCGTTCTCCGATGATCTTGCA ] [+] EMBL CB619848 [ GCACCTGCTGCACTGCGGTGGCTTCGTCCGTCTGCCGGGTCTCGCGGCGTCGCTGCCCGGACGTCGGCGCCGGCGCCCATCCCGCCGCGTCCTCGCCGTCGCCACGGAGCCCAAGCCCTCCGCCTCCGCCCCGGCGCCTCGCTCCAGGACGAGGCCGAGGACTCCCAATGACATCTCCTCCACCCGGTTCGGGGAGGTGTCCAAGGAGATCCAGCGAGTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTG ] [+] EMBL CB619331 [ GTCCAAGGAGATCCAGCCATTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATGTTGTTGGCCTAGTAGATGAGTGGGCTGCTCGATTTTTCGAAGAACTTGA ] [+] EMBL CB619333 [ GTCCAAGGAGATCCAGCGAGTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTATCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATG ] [+] EMBL CB619367 [ GTCCAAGGAGATCCAGCGAGTGCGGAAGCAGATGGAGGAGGACGAGCAGCTCGCCACGCTCATGCGCGGCCTCCGCGGCCAGAACCTCCGCGACTCCCAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGcg ] [+] EMBL CB619601 [ GCGACTCCTAGTTCGCCGACGACAACGTCCGCCTCCGCCTCGTCGAGGTTTCATCCATGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCTTGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATGTTGTTGGCCTAGTAGATGAGTGGGCTGCTCGATTTTTCGAAGAACTTGATTATGTGAATGAAGGAGAAAATGGCAATCGCTTTGCTGAAATGATGAAAAAGGATCTTCCGCAGGTCGT ] [+] EMBL CB619211 [ TCCCTGAACAACAATGAGGCGCTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGAGGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATGTTGTTGGCCTAGTAGATGAGTGGGCTGCTCGATTTTTCGAAGAACTTGATTATGTGAATGAAGGAGAAAATGGCAATCGCTTTGCTGAAATGATGAAAAAGGATCTTCCGCAGGTCGTTGTACCAAAGACATACCAGAAATACCCATCTAGAAAAGTTCTTACTACACAATGG] [+] EMBL CB618880 [ CTGCCTCTCGTGTACAGTCCTGAGATCATCTCCGCATACTGGGGGAAGCGCCCGACGGCCGTCGCCACACGGATCGTGCAATTGCTGTCTGTTGCTGGTGGTTTCATCTCTCATCTCATATCAGACCTCATAAACAACAAGCTCAAGGAGAATGAAGTAGCGCGTGCGATTGAGCTGAGGGAAATTGTGACATCTTTGGGTCCTGCTTATATTAAGCTTGGCCAAGCACTAAGTATTCGACCAGATATTCTGTCCCCTGCAGCAATGACTGAATTGCAGAAACTTTGCGATAAGGTTCCTTCGTTCTCTGATGATCTTGCAATGACTCTTCTTGAAGAAGAGCTTGGGCAGCCGTGGCACGAAATATACTCTGAATTATCTCCTTCCCCAATTGCTGCCGCATCTCTGGGGCAGGTTTACAAGGGCCGCTTGAAAGAAACCGGAGAACTTGTAGCTGTGAAAGTACAGAGGCCGTTTGTACTTGAAACTGTCACAATTGATTTATTCATCATTAGAAACCTGGGCCTGGTACTAAGGAGATTTCCGCAGGTCTCCATTGATGTTGTTGGCCTAATAGATGAGTGGGCTGCTCCATTTTTCGAAGAACTTGATTATGTGAATGAAGGAGAAAATGGCAATCGCTTTGCTGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||