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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10854#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1896 fasta sequence
[AGAGTGCTCGTCGTCGATCGCCCAAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT-GGGGTTG-TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG-GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAAATGCAAA]
[+] EMBL AK103582 [AGAGTGCTCGTCGTCGATCGCCCAAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAA ]
[+] EMBL CB620253 [ CGCCCTAGGTCCGGGACAACCCAAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAAATTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAAT ]
[+] EMBL CB640781 [ aaGTCCGGGACAACCCAAAA GCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATTGGGGGTTGTTTGGACTTATCACTCCCTGGAATTATCCTCTG ]
[+] EMBL CB663530 [ AAAAGGCCGCGGCGACAGCGGAGCAGCAGCAGCAGCAGCTCGCGCCGCCCCCCAACCGGAAGCCATGGCCGCGCCGTCGGCGATCCCCCGCCGCGGCCTGTTCATCGGCGGCGGGTGGCGGGAGCCGTCCCTCGGCCGCCGCCTCCCCGTCGTCAACCCGGCCACGGAGGCAACCATCGGTGACATCCCGGCGGCCACGGCGGAGGACGTCGAGCTCGCGGTGTCGGCGGCGAGGGATGCGTTCGGCCGCGACGGTGGGAGACACTGGTCGCGCGCGCCTGGGGCCGTGCGGGCCAAGTACCTCAAGGCGATCGCCGCTAAGATTAAAGATAAGAAATCTTATCTAGCTTTGTTGGAGACTCTTGATTCTGGGAAGCCTCTGGATGAAGCAGCTGGGGACATGGAGGATGTCGCTGCATGCTTTGAGTATTATGCTGATCTGGCAGAAGCTTTAGATGGGAAACAACGGGCACCAATCTCTCTACCCATGGAAAATTTTGAGTCCTATGTACTCAAAGAACCCATT GGGGTTG TTGGACTTATCACTCCCTGGAATTATCCTCTGCTGATGGCTACTTGGAAGGTTGCACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAA ]
[+] EMBL CB632316 [ ACCTGCCCTGGCTGCTGGGTGTACAGCTGTATTAAAGCCATCTGAGCTTGCTTCCCTGACATGTTTAGAGCTTGGTGGAATATGTGCAGAAATTGGATTACCTCCAGGAGTCTTGAACATAATTACTGGTCTGGGCACTGAAGCTGGTGCTCCATTAGCTTCACATCCCCATGTGGATAAGATTGCTTTTACTGGAAGCACAGAAACTGGTAAGAGGATAATGATTACTGCTTCCCAAATGGTCAAGCCTGTTTCGTTAGAGCTTGGTGGCAAAAGTCCTCTTATTGTCTTTGATGATGTTGATATTGATAAAGCTGTTGAGTGGGCCATGTTTGGGTGTTTTGCGAACGCTGGTCAAGTCTGCAGTGCTACTTCTCGTCTACTTTTGCATGAGAAAATTGCAAAGCGATTCTTGGATAGGTTGGTTGCATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACCAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGT ]
[-] EMBL CB663531 [ TGCATGGCAAAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATCAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAATGCAAAATGCAAA]
[-] EMBL CB620254 [ CATGG GCAAAGAGTATCAAAATCTCAGATCCACTAGAAGAAGGTTGCAGGCTGGGGTCAGTCGTTAGTGAAGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTATGGGGTATCAGACTATCATTCGCTTTGTCGAGCAACTtaaaagga ]
[-] EMBL CB632317 [ AGGGCAGTATAAAAAAATAATGAAGTTCATCTCAACAGCAAGATGTGAAGGTGCCACAATTCTATATGGGGGTGCCCGACCACAACACCTCAAAAGGGGGTTCTTTATTGAGCCTACTATTATAACAAATGTTAGCACATCAATGCAAATTTGGCGAGAGGAAGTCTTTGGACCGGTCATCTGCGTTAAAGAATTTAGGACAGAGCGTGAAGCAGTAGAACTTGCAAATGATACTCACTATGGTCTAGCTGGCGCTGTGATTTCCAATGATCTAGAGAGGTGCGAGCGCATTTCAAAGGCTATCCAGTCAGGTATCGTTTGGATAAATTGCTCGCAACCATGCTTTGTTCAAGCTCCATGGGGAGGGAACAAGCGGAGTGGTTTTGGCCGGGAGCTAGGACAGTGGGGCCTCGATAACTACTTGAGCGTGAAGCAAGTCACCAAGTACTGCTCAGATGAACCATACGGATGGTACCGGCCTCCATCCAAGCTGTAGATTTGTCATTCGTGTCAAGAGCGACGGAGCACGTCATTACCTGAAAGCAAGATCAACCCTGTACATTCAGAACGGACGGACAGAATCTTCTTTACAGTTGCTCTTACGGTCTTACAATAAGCCTTGCATGGCAATAGCAACTTATGAATTACAGTATATGATACTGCGTCATCAAGCAAGCCATGTGTGTGCTGTATCAGACTATCATTCGCTTTGTCGAGCACCTGCATTTGTCACCACTCACCACTGTTAAAGCAAGAA ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||