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Oryza sativa
cluster # 10883 cluster # 10883       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10883#0 length = 1487 sequences # 7  
consensus_10883#1 length = 655 sequences # 1  

consensusID : consensus_10883#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1487
fasta sequence
                              [GCGGTGGGGCCCATGGCGTCGTCGTCGCCGCCGTGGCTGCTGCTCCCCTCCTTCCCCTGGCCTCCCCCGCCCCCTCCCGGCTCCTCCTCCGGCCGCGGCGGCGGAGGAGGCGGCGGCGGGGACCCCGGCGACTGGAAGCCGAACGTCGTCGCGGCGTTCGCCGGCGCCCAACTCGGCCGCGCCCTCCGCCGTCGCCTCGCCGGCCTCCTCCGCTCGCCGGAGGCGCGACATCTTGGTGCCTTGCCGAGAATAGGTGACATTTGGTTTGAAGGATCAGACTCATTCGCCACACACTCGATTCTTGGAGTGTTGGAGAATGCGCTCTCCGCACCATATGCTTGCAGCTCTGTTTTGTTCAATGGAAATGGATCGGACAGGAGGTACATCGGTAGGGGGAAGTTGCCATCCAGAAGGCCAAGTGGAATCAATTCGAAGAAGAGGCTTTGGACTAATATTCTTCTTGCTGTTAATATTCTGGCTTATGTCGCTCAGATAACTACACAAGGACGATTACTTATATGGGGGGCTAAGATCAACAGTATGATTGATAGAGGAGAACTCTGGCGTCTGGCTACATCATCTCTTCTTCATGCAAATCTTGCTCATCTTGCTTTCAACTGTTTTTCTTTAAATTCAATTGGACCTATGGTGGAAATGCTTACTGGTCCTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT-CTGGAGCCCAACT---GGCAC-GGTGTACATGAATCCATATTTGATGCAGCTAAAAAAAAAGACAAGGGTATCAAACGGTTTATTTTTGGGGC]

[+] EMBL AK107657             [GCGGTGGGGCCCATGGCGTCGTCGTCGCCGCCGTGGCTGCTGCTCCCCTCCTTCCCCTGGCCTCCCCCGCCCCCTCCCGGCTCCTCCTCCGGCCGCGGCGGCGGAGGAGGCGGCGGCGGGGACCCCGGCGACTGGAAGCCGAACGTCGTCGCGGCGTTCGCCGGCGCCCAACTCGGCCGCGCCCTCCGCCGTCGCCTCGCCGGCCTCCTCCGCTCGCCGGAGGCGCGACATCTTGGTGCCTTGCCGAGAATAGGTGACATTTGGTTTGAAGGATCAGACTCATTCGCCACACACTCGATTCTTGGAGTGTTGGAGAATGCGCTCTCCGCACCATATGCTTGCAGCTCTGTTTTGTTCAATGGAAATGGATCGGACAGGAGGTACATCGGTAGGGGGAAGTTGCCATCCAGAAGGCCAAGTGGAATCAATTCGAAGAAGAGGCTTTGGACTAATATTCTTCTTGCTGTTAATATTCTGGCTTATGTCGCTCAGATAACTACACAAGGACGATTACTTATATGGGGGGCTAAGATCAACAGTATGATTGATAGAGGAGAACTCTGGCGTCTGGCTACATCATCTCTTCTTCATGCAAATCTTGCTCATCTTGCTTTCAACTGTTTTTCTTTAAATTCAATTGGACCTATGGTGGAAATGCTTACTGGTCCTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACGATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGATACAG CTAACTATAGGCTCAAGTGT  ATCAATC  TATTTat                                                ]
[+] EMBL CB659510             [                                                                                                                                                                                    GCCCTCCGCCGTCGCCTCGCCGGCCTCCTCCGCTCGCCGGAGGCGCGACATCTTGGTGCCTTGCCGAGAATAGGTGACATTTGGTTTGAAGGATCAGACTCATTCGCCACACACTCGATTCTTGGAGTGTTGGAGAATGCGCTCTCCGCACCATATGCTTGCAGCTCTGTTTTGTTCAATGGAAATGGATCGGACAGGAGGTACATCGGTAGGGGGAAGTTGCCATCCAGAAGGCCAAGTGGAATCAATTCGAAGAAGAGGCTTTGGACTAATATTCTTCTTGCTGTTAATATTCTGGCTTATGTCGCTCAGATAACTACACAAGGACGATTACTTATATGGGGGGCTAAGATCAACAGTATGATTGATAGAGGAGAACTCTGGCGTCTGGCTACATCATCTCTTCTTCATGCAAATCTTGCTCATCTTGCTTTCAACTGTTTTTCTTTAAATTCAATTGGACCTATGGTGGAAATGCTTACTGGTCCTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAAata                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB625922             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GGACCTATGGTGGAAATGCTTACTGGTCNTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT CTGGAGCCCAACT   GGCAC GGGGTACATGAATCCATATTTGATGCAGCTAAAAAAAAAGA                              ]
[-] EMBL CB625869             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT CTGGAGCCCAACT   GGCGC GGGGTACATGAATCCATATTTGATGCAGCTAAAAAAAAAGA                              ]
[-] EMBL CB625867             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT CTGGAGCCCAACT   AGCGC GGGGTACATGAATCCATATTTGATGCAGCTATATAAAAAGA                              ]
[-] EMBL CB659511             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AATGAGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTTGGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT CTGGAGCCCAACT   GGCAC GGTGTACATGAATCCATATTT                                                  ]
[-] EMBL CB660498             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATGGAAAGGAAAGTTTAGAGCATATTGGACGCGTTGTTATTTTGAATAAGGGTATGGGTCTCCTTACAAGGGGCATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAACGGTGTTCAAAGACAATGCCCCTATTCTCCAATTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTTTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATTTTACGCAAGGGGGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAATTGCAATTGTTTACTGTGACAGATTATAGGTAATCAATACTCAAATAGTCCCCCCAGCAATTGTATTTAACATGTTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTT TTGGAGCCCAACT   GGCAC GGTGTACAGGAATCCATATTTGATACAGCTAACTATAGGCTCAAGGGTATCAAACGGTTTATTTTTGGGGC]


>consensus_10883#0 GCGGTGGGGCCCATGGCGTCGTCGTCGCCGCCGTGGCTGCTGCTCCCCTCCTTCCCCTGG CCTCCCCCGCCCCCTCCCGGCTCCTCCTCCGGCCGCGGCGGCGGAGGAGGCGGCGGCGGG GACCCCGGCGACTGGAAGCCGAACGTCGTCGCGGCGTTCGCCGGCGCCCAACTCGGCCGC GCCCTCCGCCGTCGCCTCGCCGGCCTCCTCCGCTCGCCGGAGGCGCGACATCTTGGTGCC TTGCCGAGAATAGGTGACATTTGGTTTGAAGGATCAGACTCATTCGCCACACACTCGATT CTTGGAGTGTTGGAGAATGCGCTCTCCGCACCATATGCTTGCAGCTCTGTTTTGTTCAAT GGAAATGGATCGGACAGGAGGTACATCGGTAGGGGGAAGTTGCCATCCAGAAGGCCAAGT GGAATCAATTCGAAGAAGAGGCTTTGGACTAATATTCTTCTTGCTGTTAATATTCTGGCT TATGTCGCTCAGATAACTACACAAGGACGATTACTTATATGGGGGGCTAAGATCAACAGT ATGATTGATAGAGGAGAACTCTGGCGTCTGGCTACATCATCTCTTCTTCATGCAAATCTT GCTCATCTTGCTTTCAACTGTTTTTCTTTAAATTCAATTGGACCTATGGTGGAAATGCTT ACTGGTCCTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATG AGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTT GGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGT TTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATGGGTCTCCTTACAAGGGGC ATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTC GGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAAT GCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACG GATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACT GCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAG GGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATT TTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAG TCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGT GTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGAT GCAGCTAAAAAAAAAGACAAGGGTATCAAACGGTTTATTTTTGGGGC



consensusID : consensus_10883#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 655
fasta sequence
                              [GGCATCGTTAACTGGGGCCATGTAAGCCTCCTAATCTTAGTTCAATGTATGAAATATTTACGTAATGACCTCACTTGACACTTGAATAATGGCAGTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGATACAGCTAACTATAGGCTCAAGTGTATCAATCTATTTAT]

[+] EMBL CB682362             [GGCATCGTTAACTGGGGCCATGTAAGCCTCCTAATCTTAGTTCAATGTATGAAATATTTACGTAATGACCTCACTTGACACTTGAATAATGGCAGTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGATACAGCTAACTATAGGCTCAAGTGTATCAATCTATTTAT]


>consensus_10883#1 GGCATCGTTAACTGGGGCCATGTAAGCCTCCTAATCTTAGTTCAATGTATGAAATATTTA CGTAATGACCTCACTTGACACTTGAATAATGGCAGTTGGGAGGCTTGCTCGGAGGCATGG CTATGGCATGGTTCCTCGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAG CGGTGTTCAAAGACAATGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGA ATTTTGTATTTAAAACGGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAG AGGTGGGGTTTGACACTGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTT TGGAAAGCTATTTCCAGGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGT TCACCTGAGTCATTATTTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCT AATCAATACTCAAATAGTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGG AGCCCAACTGGCACGGTGTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTAC ATGAATCCATATTTGATACAGCTAACTATAGGCTCAAGTGTATCAATCTATTTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10883#0      GCGGTGGGGCCCATGGCGTCGTCGTCGCCGCCGTGGCTGCTGCTCCCCTCCTTCCCCTGG 60
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      CCTCCCCCGCCCCCTCCCGGCTCCTCCTCCGGCCGCGGCGGCGGAGGAGGCGGCGGCGGG 120
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GACCCCGGCGACTGGAAGCCGAACGTCGTCGCGGCGTTCGCCGGCGCCCAACTCGGCCGC 180
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GCCCTCCGCCGTCGCCTCGCCGGCCTCCTCCGCTCGCCGGAGGCGCGACATCTTGGTGCC 240
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      TTGCCGAGAATAGGTGACATTTGGTTTGAAGGATCAGACTCATTCGCCACACACTCGATT 300
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      CTTGGAGTGTTGGAGAATGCGCTCTCCGCACCATATGCTTGCAGCTCTGTTTTGTTCAAT 360
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GGAAATGGATCGGACAGGAGGTACATCGGTAGGGGGAAGTTGCCATCCAGAAGGCCAAGT 420
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GGAATCAATTCGAAGAAGAGGCTTTGGACTAATATTCTTCTTGCTGTTAATATTCTGGCT 480
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      TATGTCGCTCAGATAACTACACAAGGACGATTACTTATATGGGGGGCTAAGATCAACAGT 540
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      ATGATTGATAGAGGAGAACTCTGGCGTCTGGCTACATCATCTCTTCTTCATGCAAATCTT 600
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GCTCATCTTGCTTTCAACTGTTTTTCTTTAAATTCAATTGGACCTATGGTGGAAATGCTT 660
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      ACTGGTCCTAGAAGATATCTTGCCGTGTATTTCACTTCGGCTCTGGCAGGTTCATTAATG 720
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      AGTTATCGCTATTGTGCGTCTCCTGCGGTTGGTGCGTCAGGGGCCATTTTTGGATTGGTT 780
consensus_10883#1      ------------------------------------------------------------
                                                                                   

consensus_10883#0      GGTGCCTATGCTGTTTATACGTGGAGGCATAGGAGATTTTTGGGGCATGGAAAGGAAAGT 840
consensus_10883#1      ----------------------------------------GGCATCGTTAACTGGGGCCA 20
                                                                *   * *  *  **     

consensus_10883#0      TTAGAGCATATTGGACGCGTTGTTATCTTGAATATGGGTATG-GGTCTCCTTACAAGGGG 899
consensus_10883#1      TGTAAGCCTCCTAATCTTAGTTCAATGTATGAAATATTTACGTAATGACCTCACTTGACA 80
                       *   *** *  *   *    *   ** *   * **   ** *   *  *** **  *   

consensus_10883#0      CATTGATAACTGGGGCCATTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCT 959
consensus_10883#1      CTTGAATAATGG----CAGTTGGGAGGCTTGCTCGGAGGCATGGCTATGGCATGGTTCCT 136
                       * *  ****  *    ** *****************************************

consensus_10883#0      CGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAA 1019
consensus_10883#1      CGGTCCAGCTTGGCAATATCAATATGTGTCAAAGGACGGAAGAGCGGTGTTCAAAGACAA 196
                       ************************************************************

consensus_10883#0      TGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAAC 1079
consensus_10883#1      TGCCCCTATTCTCCAACTAAGCAACGGGAAATGGTTGAGGTAGAATTTTGTATTTAAAAC 256
                       ************************************************************

consensus_10883#0      GGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACAC 1139
consensus_10883#1      GGATTCCTAACTTGTGTGGGACACAGAAATTGAAGACTGAAGAGAGGTGGGGTTTGACAC 316
                       ************************************************************

consensus_10883#0      TGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCA 1199
consensus_10883#1      TGCCATTCTGCCAAGGTGATGGAGTGGACGCCTAGTTTGGACTTTGGAAAGCTATTTCCA 376
                       ************************************************************

consensus_10883#0      GGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTAT 1259
consensus_10883#1      GGGAAACTCCAGCTCCAAATCTTACGCAAGGGCGACATTTGAGTTCACCTGAGTCATTAT 436
                       ************************************************************

consensus_10883#0      TTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATA 1319
consensus_10883#1      TTTTGGATATAAGTTGCAATTGTCTACTGTGACAGATTATAGCTAATCAATACTCAAATA 496
                       ************************************************************

consensus_10883#0      GTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGG 1379
consensus_10883#1      GTCACCACAGCAATTGTATTTAACATGCTTATCAGTGTTACTGGAGCCCAACTGGCACGG 556
                       ************************************************************

consensus_10883#0      TGTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGA 1439
consensus_10883#1      TGTACATGAATCCATATTTCTGGAGCCCAACTGGCACGGTGTACATGAATCCATATTTGA 616
                       ************************************************************

consensus_10883#0      TGCAGCTAAAAAAAAAGACAAGGGTATCAAACGGTTTATTTTTGGGGC 1487
consensus_10883#1      TACAGCTAACTATAGGCTCAAGTGTATCAATCTATTTAT--------- 655
                       * *******  * *    **** ******* *  *****         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)