These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10891#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 2155 fasta sequence [AGCCAAACCCCTCCTCCTCTGGTCTCCAGTGGCGTAACGACGAGATTCGTCCTCCTCTCCTCCGAGTAAAAGAAGGAGACCCCCTTTGCTTCGCTGTTACCGCACAGTGAGGCCACGTCGTAGGGTTTTTGCTTGCTTCTCCCGGCTGCAAAGCGGAGCCGCGGCGCGGCCCGGGGACGAGGAGGGAGGGGAGCCATGGAGATCGGGCAGCATCCGGCGAGCGGCTACTCCAAGGAGCACCAGAAGACCTACCAGGAGTGGTTCGCCTTCGCCGACTCAGATGGCGACGGGCGCATCACGGGGCCCGACGCCATCAAGTTCTTCGCCATGTCCAAGCTCCCCCGCGCCGACCTCAAGCAGGTTTGGGCAATCGCGGACTCCAAGCGGCAGGGGTACTTAGGTTTCAGCGAATTCGTCACGGCAATGCAGCTTGTCTCTCTGGCGCAAGCGGGGGATGAGATCACTCAAGACAGCCTTAAGCGCGATGACTTGGGCAGCCTGAATCCTCCAACGATGGATGGTTTGGATGCTCTACTTGTGAAATCAAAGCATCATGCTAAGAGAGTTGATCCAGATATCGATGGATTTCCTCAGGCTCAATCTCCTGCAACGAGCCAATGGTTCAGCTCAAAGTCCTCAAAGAAGATACCCCTGAATGCTGTTACTTCTGTCATTGATGGGTTAAAAAAACTATACATCGAAAAATTAAAGCCTTTGGAAGTTACATACAAATTCAATGATTTTGTATCTCCATTACTGACAAATAGTGATTTTGATGCNAAGCCAATGGTTATGCTTTTAGGTCAATATTCTACAGGGAAAACAACTTTTATAAAACATCTGCTCAGAACAAGCTATCCAGGTGCCCATATTGGACCAGAGCCAACAACTGACAGATTTGTTGTTGTCATGTCAGGACCAGATGAAAGGACTATTCCTGGGAATACCATAGCTGTGCAAGCAGACATGCCTTTCAGTGGTCTTACAACATTTGGAACTGCTTTTTTATCCAAGTTCGAATGCTCTCAGATGCCACATCCACTACTAGAGCATATCACCTTTGTCGACACACCTGGTGTTCTCTCAGGCGAGAAGCAACGGACGCAACGTAGCTATGATTTCACTGGTGTCACATCATGGTTTGCGGCCAAGTGTGATCTTATTCTTCTTCTGTTTGATCCACATAAGCTTGATATCAGTGATGAGTTCAAACGTGTCATTGGATCTTTACGCGGACATGATGACAAAATACGTGTAGTGCTAAACAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTCTATGGTGCATTGATGTGGTCTCTTGGGAAAGTATTGAATACCCCTGAGGTTGCACGTGTTTATATTGGATCATTTAATGACAAACCAGTAAATGAATCAGCTGTTGGTCCAATTGGAAAGGAACTATTTGAGAGAGAGCAAGATGATCTACTTTCTGATCTGAAAGATATACCGAAGAAAGCTTGTGACCGTCGAATCAATGAATTTGTTAAACGTGCAAGAGCAGCCAAGATTCATGCCCATATAATTGGTCATTTGAAGAAGGAGATGCCTGCGATGATGGGCAAAGCCAAAGCTCAGCAGCGACTTATAGACAATTTGGAGAATGAGTTCGCAAAGGTCCAAAGGGAACAACATCTTCCAGCTGGAGATTTCCCTTATGTGGAGCATTTCAGAGATGTCCTGGGTGGGTATAGCATTGACAAGTTTGAGAAAATCAAGCCCA-AGATGGTGCA-GGCGGTGGATGATATGCTTGGATACGACATTCCAGAACTCCTCA-AGAACTTCAGGAACCCATACGAGTGAATGAACACCTTTA-AATTAT-GACCATGGTTTTCAACTTT-TTATCA-TGATGAGAGACTAGTCATATTCGGAGGGAATAGGGATGCGCTGCA-TTCCATAGTTTTGCAACTGTCAGAAATCTGGGA-TTGCTGAGGTTTAGGTCTTGTAACTCTTGTAGGGCG-TTTATTGTGGCATACTTTACCTTGTTGTATAACTGCATGCATAAGAATCTGAGAGCCATTG-CTCAATTCTTTTCAACGAAGATGTGAACTGTTGGAAGCCCATCGTAAACGGGAAGCGCTGTATGAAAGAATATGACGCACATCGTCTTTTGTTTGTTTAAAAAACA] [+] EMBL CB678885 [AGCCAAACCCCTCCTCCTCTGGTCTCCAGTGGCGTAACGACGAGATTCGTCCTCCTCTCCTCCGAGTAAAAGAAGGAGACCCCCTTTGCTTCGCTGTTACCGCACAGTGAGGCCACGTCGTAGGGTTTTTGCTTGCTTCTCCCGGCTGCAAAGCGGAGCCGCGGCGCGGCCCGGGGACGAGGAGGGAGGGGAGCCATGGAGATCGGGCAGCATCCGGCGAGCGGCTACTCCAAGGAGCACCAGAAGACCTACCAGGAGTGGTTCGCCTTCGCCGACTCAGATGGCGACGGGCGCATCACGGGGCCCGACGCCATCAAGTTCTTCGCCATGTCCAAGCTCCCCCGCGCCGACCTCAAGCAGGTTTGGGCAATCGCGGACTCCAAGCGGCAGGGGTACTTAGGTTTCAGCGAATTCGTCACGGCAATGCAGCTTGTCTCTCTGGCGCAAGCGGGGGATGAGATCACTCAAGACAGCCTTAAGCGCGATGACTTGGGCAGCCTGAATCCTCCAACGATGGATGGTTTGGATGCTCTACTTGTGAAATCAAAGCATCATGCTAAGAGAGTTGATCCAGATATCGATGGATTTCCTCAGGCTCAATCTCCTGCAACGAGCCAATGGTTCAGCTCAAAGTCCTCAAAGAAGATACCCCTGAATGCTGTTACTTCTGTCATTGATGGGTTAAAAAAACTATACATCGAAAAATTAAAGCCTTTGGAAGTTACATACAAATTCAATGATTTTGTATCTCCATTACTGACAAATAGTGATTTTGATGCNAAGCCAATG ] [+] EMBL AK072593 [ GTGAGGCCACGTCGTAGGGTTTTTGCTTGCTTCTCCCGGCTGCAAAGCGGAGCCGCGGCGCGGCCCGGGGACGAGGAGGGAGGGGAGCCATGGAGATCGGGCAGCATCCGGCGAGCGGCTACTCCAAGGAGCACCAGAAGACCTACCAGGAGTGGTTCGCCTTCGCCGACTCAGATGGCGACGGGCGCATCACGGGGCCCGACGCCATCAAGTTCTTCGCCATGTCCAAGCTCCCCCGCGCCGACCTCAAGCAGGTTTGGGCAATCGCGGACTCCAAGCGGCAGGGGTACTTAGGTTTCAGCGAATTCGTCACGGCAATGCAGCTTGTCTCTCTGGCGCAAGCGGGGGATGAGATCACTCAAGACAGCCTTAAGCGCGATGACTTGGGCAGCCTGAATCCTCCAACGATGGATGGTTTGGATGCTCTACTTGTGAAATCAAAGCATCATGCTAAGAGAGTTGATCCAGATATCGATGGATTTCCTCAGGCTCAATCTCCTGCAACGAGCCAATGGTTCAGCTCAAAGTCCTCAAAGAAGATACCCCTGAATGCTGTTACTTCTGTCATTGATGGGTTAAAAAAACTATACATCGAAAAATTAAAGCCTTTGGAAGTTACATACAAATTCAATGATTTTGTATCTCCATTACTGACAAATAGTGATTTTGATGCAAAGCCAATGGTTATGCTTTTAGGTCAATATTCTACAGGGAAAACAACTTTTATAAAACATCTGCTCAGAACAAGCTATCCAGGTGCCCATATTGGACCAGAGCCAACAACTGACAGATTTGTTGTTGTCATGTCAGGACCAGATGAAAGGACTATTCCTGGGAATACCATAGCTGTGCAAGCAGACATGCCTTTCAGTGGTCTTACAACATTTGGAACTGCTTTTTTATCCAAGTTCGAATGCTCTCAGATGCCACATCCACTACTAGAGCATATCACCTTTGTCGACACACCTGGTGTTCTCTCAGGCGAGAAGCAACGGACGCAACGTAGCTATGATTTCACTGGTGTCACATCATGGTTTGCGGCCAAGTGTGATCTTATTCTTCTTCTGTTTGATCCACATAAGCTTGATATCAGTGATGAGTTCAAACGTGTCATTGGATCTTTACGCGGACATGATGACAAAATACGTGTAGTGCTAAACAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTCTATGGTGCATTGATGTGGTCTCTTGGGAAAGTATTGAATACCCCTGAGGTTGCACGTGTTTATATTGGATCATTTAATGACAAACCAGTAAATGAATCAGCTGTTGGTCCAATTGGAAAGGAACTATTTGAGAGAGAGCAAGATGATCTACTTTCTGATCTGAAAGATATACCGAAGAAAGCTTGTGACCGTCGAATCAATGAATTTGTTAAACGTGCAAGAGCAGCCAAGATTCATGCCCATATAATTGGTCATTTGAAGAAGGAGATGCCTGCGATGATGGGCAAAGCCAAAGCTCAGCAGCGACTTATAGACAATTTGGAGAATGAGTTCGCAAAGGTCCAAAGGGAACAACATCTTCCAGCTGGAGATTTCCCTTATGTGGAGCATTTCAGAGATGTCCTGGGTGGGTATAGCATTGACAAGTTTGAGAAAATCAAGCCCA AGATGGTGCA GGCGGTGGATGATATGCTTGGATACGACATTCCAGAACTCCTCA AGAACTTCAGGAACCCATACGAGTGAATGAACACCTTTA AATTAT GACCATGGTTTTCAACTTT TTATCA TGATGAGAGACTAGTCATATTCGGAGGGAATAGGGATGCGCTGCA TTCCATAGTTTTGCAACTGTCAGAAATCTGGGA TTGCTGAGGTTTAGGTCTTGTAACTCTTGTAGGGCG TTTATTGTGGCATACTTTACCTTGTTGTATAACTGCATGCATAAGAATCTGAGAGCCATTG CTCAATTCTTTTCAACGAAGATGTGAACTGTTGG ] [+] EMBL OS38022 [ GACAAAATACGTGTAGTGCTAAACAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTCTATGGTGCATTGATGTGGTCTCTTGGGAAAGTATTGAATACCCCTGAGGTTGCACGTGTTTATATTGGATCATTTAATGACAAACCAGTAAATGAATCAGCTGTTGGTCCAATTGG AAGG ACTATTTGAGAGAGAGC AGATGATCTACTTTCTGATCTG AAGATATACCG AGAAAGCTTGTGACCGTCGAATCAATGAATTTGTT AACGTGC AGAGCAGCCAAGATTCATG CCATATCATTGGGCATTTG AGAAGGGAATGCCT CGATGAT GGCAA CAAAGCTCAGCA ] [+] EMBL BI804992 [ GACAAGTTTGAGAAAATCAAGCCCACAGATGGT CACGGCGGTGGATGATATGCTTGGATACGACATTCCAGAACTCCTCACAGAACTTCAGGAACCCATACGAGTGAATGAACACCTTTACAATTATCGACCCTGGTTTTCAACTTTCTTATCACTGATGAGAGACTAGTCATATTCGGAGGGAATAGGGATGCGCTGCACTTCCATAGTTTTGCAACTGTCAGAAATCTGGGACTTTCTGAGGTTTAGGTCTTGTAACTCTTGTAGGGCGATTTATTGTGGCATACTTTACCTTGTTGTATAACTGCATGCATAAGAATCTGAGAGCCCTTGCCTCAATTCTTTTCAACGAAGATGTGAACTCTTGGAAGCCCATCGTAAACGGGAAGCGCTGTATGAAAGAATATGACGCACATCGTCTTTTGTTTGTTTAAAAAACA] consensusID : consensus_10891#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1854 fasta sequence [ACCCCCACCTCGTCAGGTTTCCGTTCCGCCTCCGCCTCTGCTGCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCGACGAGGCATGGAGCTCGCGCGATCGGCCTGCTCCAAGGAGCACCACAAGATCTACGCCGGCTGGTTCGCCGTCGCCAACCCAGATGGAGATGGGCGTGTCACGGGTGCTGATGCTACCAAGTTCTTCGCCATGTCCGGCCTGTCCCGCGCCGACCTCAAGCAGGTCTGGGCGATCGCGGACACCAAGCGGCAGGGGTTCCTCGGCTTCGGCGAGTTCGTCGCCGCGATGCAGCTCGTGTCACTGGCGCAAGCGGGGGAGGAGATCACTCAGGACAGTCTGAAGCGCGAAGACCTGAGTAGTTTGGATCCACCTGTGATGGAAGGTCTTGACGAACTACTTGCGAGATCAAAGGCTGGGGTAAAGAGAGTACACCCAGAAGAAAATGGCGCCCCTCAGGTTCAAGTGCATTCTGCTAATAGCTGGTTCAGTTCAAAATCAGCAAAGAAGATGCAGGTCCCCCTGACTGCTGTTACTTCTGTAATTGATGGCTTAAAAAGACTATACGTAGAAAAACTGAAGCCTCTGGAGGTTGCATACCGGTTCAACGATTTTGCTTCCCCGTTATTGACAAGCAGTGATTTTGATGCAAAACCAATGGTTATGCTCTTGGGTCAATATTCTACAGGGAAAACAACTTTCATTAAGCATCTGCTGCAAACAAGTTATCCAGGAGCTCATGTTGGACCAGAGCCCACTACTGACCGATTTGTTGTTGTCATGTCTGGATCTGATGAAAGGACTATTCCTGGCAATACTATTGCTGTTCAAGCTGATATGCCATTCACTGGTCTTACGACATTTGGCGGTGCTTTTCTGTCAAAGTTCGAGTGCTCTCAGATGCCACATCCGCTGCTCGATCATATCACCTTTGTGGACACCCCCGGTGTCCTGTCTGGTGAAAAGCAGCGGACGCAGCGTAGCTATGATTTCGCCGGCATAACTTCATGGTTTGCTGCTAAGTGTGACCTTATTCTTCTTCTGTTTGATCCTCATAAGCTTGATATCAGTGATGAGTTCAAACGTGTGATTGCATCTTTACGTGGCCATGATGACAAAATACGTGTAGTGCTGAATAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTGTATGGTGCACTGATGTGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTCAATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAAGAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATCGTCGGGTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCATCTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCTAAGGCTCAACAGCGACTCATAGACAACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTCCCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAACATCGACAGGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACACTGTATGTGAGTGACACCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTCTACTTTACCTGCC] [+] EMBL AK073124 [ACCCCCACCTCGTCAGGTTTCCGTTCCGCCTCCGCCTCTGCTGCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCGACGAGGCATGGAGCTCGCGCGATCGGCCTGCTCCAAGGAGCACCACAAGATCTACGCCGGCTGGTTCGCCGTCGCCAACCCAGATGGAGATGGGCGTGTCACGGGTGCTGATGCTACCAAGTTCTTCGCCATGTCCGGCCTGTCCCGCGCCGACCTCAAGCAGGTCTGGGCGATCGCGGACACCAAGCGGCAGGGGTTCCTCGGCTTCGGCGAGTTCGTCGCCGCGATGCAGCTCGTGTCACTGGCGCAAGCGGGGGAGGAGATCACTCAGGACAGTCTGAAGCGCGAAGACCTGAGTAGTTTGGATCCACCTGTGATGGAAGGTCTTGACGAACTACTTGCGAGATCAAAGGCTGGGGTAAAGAGAGTACACCCAGAAGAAAATGGCGCCCCTCAGGTTCAAGTGCATTCTGCTAATAGCTGGTTCAGTTCAAAATCAGCAAAGAAGATGCAGGTCCCCCTGACTGCTGTTACTTCTGTAATTGATGGCTTAAAAAGACTATACGTAGAAAAACTGAAGCCTCTGGAGGTTGCATACCGGTTCAACGATTTTGCTTCCCCGTTATTGACAAGCAGTGATTTTGATGCAAAACCAATGGTTATGCTCTTGGGTCAATATTCTACAGGGAAAACAACTTTCATTAAGCATCTGCTGCAAACAAGTTATCCAGGAGCTCATGTTGGACCAGAGCCCACTACTGACCGATTTGTTGTTGTCATGTCTGGATCTGATGAAAGGACTATTCCTGGCAATACTATTGCTGTTCAAGCTGATATGCCATTCACTGGTCTTACGACATTTGGCGGTGCTTTTCTGTCAAAGTTCGAGTGCTCTCAGATGCCACATCCGCTGCTCGATCATATCACCTTTGTGGACACCCCCGGTGTCCTGTCTGGTGAAAAGCAGCGGACGCAGCGTAGCTATGATTTCGCCGGCATAACTTCATGGTTTGCTGCTAAGTGTGACCTTATTCTTCTTCTGTTTGATCCTCATAAGCTTGATATCAGTGATGAGTTCAAACGTGTGATTGCATCTTTACGTGGCCATGATGACAAAATACGTGTAGTGCTGAATAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTGTATGGTGCACTGATGTGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTCAATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAAGAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATCGTCGGGTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCATCTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCTAAGGCTCAACAGCGACTCATAGACAACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTCCCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAACATCGACAGGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACACTGTATGTGAGTGACACCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTCTACTTTACCTGCC] [+] EMBL AK058991 [ AAGGAGGTGTTGGGTGGGTACAACATCGACAAGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACACTGTATGTGAGTGACACCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTCTACTTTACCTGCC] consensusID : consensus_10891#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 664 fasta sequence [CACTGATGTGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTCAATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAAGAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATTGTCGGGTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCATCTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCCAAGGCTCAACAGCGACTCATAGACAACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTCCCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAGCATCGCCAAGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACCCTGTATGTGAGTGCCCCCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTTTAAAAAAAAAAAAAAAAAAA] [-] EMBL CA762616 [CACTGATGTGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTCAATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAAGAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATTGTCGGGTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCATCTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCCAAGGCTCAACAGCGACTCATAGACAACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTCCCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAGCATCGCCAAGTTCGAGAAGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGATAAAGATGACCCCGCTCGGTCGTGAGTCGTGACCCTGTATGTGAGTGCCCCCTGATGATGAAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTTTAAAAAAAAAAAAAAAAAAA] consensusID : consensus_10891#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 306 fasta sequence [GATTCCAAAGTCCAAAGGGATACCATCTTCCACCGGAGACTTCCTGACGTTGACCACTTCAAGGAGTTTTTGGTGGGTACAAACATCAGACAAGTTCGAGAAGATGAAGCCCAATTTGGTCAGCCGTGACAGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGACCCCCTGACCTCTCTCAGTTGTAAGATAAAGATGCCCCGCTCGTCGTGATCGGACACTGTATGGGAGGACACCTGATGATGAAGGATATTTTCAAGCGAACTGCCGTTTTTTTAA] [+] EMBL BI802791 [GATTCCAAAGTCCAAAGGGATACCATCTTCCACCGGAGACTTCCTGACGTTGACCACTTCAAGGAGTTTTTGGTGGGTACAAACATCAGACAAGTTCGAGAAGATGAAGCCCAATTTGGTCAGCCGTGACAGACATGCTCGCGTACGACATCCCGGAGCTCCTCAAGAACTTCAGGAACCCTTACGAGTGACCCCCTGACCTCTCTCAGTTGTAAGATAAAGATGCCCCGCTCGTCGTGATCGGACACTGTATGGGAGGACACCTGATGATGAAGGATATTTTCAAGCGAACTGCCGTTTTTTTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 ------------------------------------------------------------ consensus_10891#0 AGCCAAACCCCTCCTCCTCTGGTCTCCAGTGGCGTAACGACGAGATTCGTCCTCCTCTCC 60 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 -------------------------------------------------------ACCCC 5 consensus_10891#0 TCCGAGTAAAAGAAGGAGACCCCCTTTGCTTCGCTGTTACCGCACAGTGAGGCCACGTCG 120 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CACCTCGTCAGGTTTCCGTTCCGCCTCCGCCTCTGCTGCTCCTCCTCCTCCTCGCCGCCG 65 consensus_10891#0 TAGGGTTTTTGCTTGCTTCTCCCGGCTGCAAAGCGGAGCCGCGGCGCGGCCCGGGGACGA 180 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CCGCCGCCGCGACGAGGCATGGAGCTCGCGCGATCGGCCTGCTCCAAGGAGCACCACAAG 125 consensus_10891#0 GGAGGGAGGGGAGCCATGGAGATCGGGCAGCATCCGGCGAGCGGCTACTCCAAGGAGCAC 240 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 ATCTACGCCGGCTGGTTCGCCGTCGCCAACCCAGATGGAGATGGGCGTGTCACGGGTGCT 185 consensus_10891#0 CAGAAGACCTACCAGGAGTGGTTCGCCTTCGCCGACTCAGATGGCGACGGGCGCATCACG 300 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GATGCTACCAAGTTCTTCGCCATGTCCGGCCTGTCCCGCGCCGACCTCAAGCAGGTCTGG 245 consensus_10891#0 GGGCCCGACGCCATCAAGTTCTTCGCCATGTCCAAGCTCCCCCGCGCCGACCTCAAGCAG 360 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GCGATCGCGGACACCAAGCGGCAGGGGTTCCTCGGCTTCGGCGAGTTCGTCGCCGCGATG 305 consensus_10891#0 GTTTGGGCAATCGCGGACTCCAAGCGGCAGGGGTACTTAGGTTTCAGCGAATTCGTCACG 420 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CAGCTCGTGTCACTGGCGCAAGCGGGGGAGGAGATCACTCAGGACAGTCTGAAGCGCGAA 365 consensus_10891#0 GCAATGCAGCTTGTCTCTCTGGCGCAAGCGGGGGATGAGATCACTCAAGACAGCCTTAAG 480 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GACCTGAGTAGTTTGGATCCACCTGTGATGGAAGGTCTTGACGAACTACTTGCGAGATCA 425 consensus_10891#0 CGCGATGACTTGGGCAGCCTGAATCCTCCAACGATGGATGGTTTGGATGCTCTACTTGTG 540 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 AAGGCTGGGGTAAAGAGAGTACACCCAGAAGAAAATGGCGCCCCTCAGGTTCAAGTGCAT 485 consensus_10891#0 AAATCAAAGCATCATGCTAAGAGAGTTGATCCAGATATCGATGGATTTCCTCAGGCTCAA 600 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 TCTGCTAATAGCTGGTTCAGTTCAAAATCAGCAAAGAAGATGCAGGTCCCCCTGACTGCT 545 consensus_10891#0 TCTCCTGCAACGAGCCAATGGTTCAGCTCAAAGTCCTCAAAGAAGATACCCCTGAATGCT 660 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GTTACTTCTGTAATTGATGGCTTAAAAAGACTATACGTAGAAAAACTGAAGCCTCTGGAG 605 consensus_10891#0 GTTACTTCTGTCATTGATGGGTTAAAAAAACTATACATCGAAAAATTAAAGCCTTTGGAA 720 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GTTGCATACCGGTTCAACGATTTTGCTTCCCCGTTATTGACAAGCAGTGATTTTGATGCA 665 consensus_10891#0 GTTACATACAAATTCAATGATTTTGTATCTCCATTACTGACAAATAGTGATTTTGATGCN 780 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 AAACCAATGGTTATGCTCTTGGGTCAATATTCTACAGGGAAAACAACTTTCATTAAGCAT 725 consensus_10891#0 AAGCCAATGGTTATGCTTTTAGGTCAATATTCTACAGGGAAAACAACTTTTATAAAACAT 840 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CTGCTGCAAACAAGTTATCCAGGAGCTCATGTTGGACCAGAGCCCACTACTGACCGATTT 785 consensus_10891#0 CTGCTCAGAACAAGCTATCCAGGTGCCCATATTGGACCAGAGCCAACAACTGACAGATTT 900 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GTTGTTGTCATGTCTGGATCTGATGAAAGGACTATTCCTGGCAATACTATTGCTGTTCAA 845 consensus_10891#0 GTTGTTGTCATGTCAGGACCAGATGAAAGGACTATTCCTGGGAATACCATAGCTGTGCAA 960 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GCTGATATGCCATTCACTGGTCTTACGACATTTGGCGGTGCTTTTCTGTCAAAGTTCGAG 905 consensus_10891#0 GCAGACATGCCTTTCAGTGGTCTTACAACATTTGGAACTGCTTTTTTATCCAAGTTCGAA 1020 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 TGCTCTCAGATGCCACATCCGCTGCTCGATCATATCACCTTTGTGGACACCCCCGGTGTC 965 consensus_10891#0 TGCTCTCAGATGCCACATCCACTACTAGAGCATATCACCTTTGTCGACACACCTGGTGTT 1080 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CTGTCTGGTGAAAAGCAGCGGACGCAGCGTAGCTATGATTTCGCCGGCATAACTTCATGG 1025 consensus_10891#0 CTCTCAGGCGAGAAGCAACGGACGCAACGTAGCTATGATTTCACTGGTGTCACATCATGG 1140 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 TTTGCTGCTAAGTGTGACCTTATTCTTCTTCTGTTTGATCCTCATAAGCTTGATATCAGT 1085 consensus_10891#0 TTTGCGGCCAAGTGTGATCTTATTCTTCTTCTGTTTGATCCACATAAGCTTGATATCAGT 1200 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GATGAGTTCAAACGTGTGATTGCATCTTTACGTGGCCATGATGACAAAATACGTGTAGTG 1145 consensus_10891#0 GATGAGTTCAAACGTGTCATTGGATCTTTACGCGGACATGATGACAAAATACGTGTAGTG 1260 consensus_10891#2 ----------------------------------------------------CACTGATG 8 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CTGAATAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTGTATGGTGCACTGATG 1205 consensus_10891#0 CTAAACAAGGCAGACCAAGTTGACACTCAGCAGCTTATGAGAGTCTATGGTGCATTGATG 1320 consensus_10891#2 TGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTC 68 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 TGGTCTCTTGGGAAAGTACTCAATACCCCTGAGGTCGCGCGTGTTTATATCGGGTCATTC 1265 consensus_10891#0 TGGTCTCTTGGGAAAGTATTGAATACCCCTGAGGTTGCACGTGTTTATATTGGATCATTT 1380 consensus_10891#2 AATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAA 128 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 AATGACAAACCAGTGAATGAATCAGCTGTTGGACCAATTGGAAAGGACTTGTTTGAGAAA 1325 consensus_10891#0 AATGACAAACCAGTAAATGAATCAGCTGTTGGTCCAATTGGAAAGGAACTATTTGAGAGA 1440 consensus_10891#2 GAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATTGTCGG 188 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GAGCAAGATGATCTCCTCTGTGATCTGAAAGACATACCCAAGAAGGCCTGTGATCGTCGG 1385 consensus_10891#0 GAGCAAGATGATCTACTTTCTGATCTGAAAGATATACCGAAGAAAGCTTGTGACCGTCGA 1500 consensus_10891#2 GTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCAT 248 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 GTCAACGAGTTTGTTAAACGTGCTAGAGCTGCTAAGATTCATGCTTACATAATTGGCCAT 1445 consensus_10891#0 ATCAATGAATTTGTTAAACGTGCAAGAGCAGCCAAGATTCATGCCCATATAATTGGTCAT 1560 consensus_10891#2 CTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCCAAGGCTCAACAGCGACTCATAGAC 308 consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 CTAAAGAAGGAGATGCCTGCAATGATGGGGAAAGCTAAGGCTCAACAGCGACTCATAGAC 1505 consensus_10891#0 TTGAAGAAGGAGATGCCTGCGATGATGGGCAAAGCCAAAGCTCAGCAGCGACTTATAGAC 1620 consensus_10891#2 AACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTC 368 consensus_10891#3 --------------GATTCCAAAG-TCCAAAGGGA-TACCATCTTCCA-CCGGAGACTTC 43 consensus_10891#1 AACCTGGGTGATGAGTTTGCAAAGGTCCAAAGGGAGTACCATCTTCCAGCCGGAGACTTC 1565 consensus_10891#0 AATTTGGAGAATGAGTTCGCAAAGGTCCAAAGGGAACAACATCTTCCAGCTGGAGATTTC 1680 * * ***** ********** * ********* * ***** *** consensus_10891#2 CCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAG-CATC-GCCAAGTTCGAGA 426 consensus_10891#3 C-TGACGTTGACCACTTCAAGGAGTTTTTGG-TGGGTACAAACATCAGACAAGTTCGAGA 101 consensus_10891#1 CCTGACGTTGAGCACTTCAAGGAGGTGTTGGGTGGGTACAA-CATC-GACAGGTTCGAGA 1623 consensus_10891#0 CCTTATGTGGAGCATTTCAGAGATGTCCTGGGTGGGTATAG-CATT-GACAAGTTTGAGA 1738 * * * ** ** ** **** ** * *** ****** * *** * ** *** **** consensus_10891#2 AGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGC 486 consensus_10891#3 AGATGAAGCCCAATTTGGTC--AGCCGTGACAGACATGCTCGCGTACGACATCCCGGAGC 159 consensus_10891#1 AGATGAAGCCCAAGCTGGTGCAGGCCGTGGACGACATGCTCGCGTACGACATCCCGGAGC 1683 consensus_10891#0 AAATCAAGCCCAAGATGGTGCAGGCGGTGGATGATATGCTTGGATACGACATTCCAGAAC 1798 * ** ******** **** ** *** ** ***** * ******** ** ** * consensus_10891#2 TCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGA 546 consensus_10891#3 TCCTCAAGAACTTCAGGAACCCTTACGAGTGACCCC-CTGACCTCTC-TCAGTTGTAAGA 217 consensus_10891#1 TCCTCAAGAACTTCAGGAACCCTTACGAGTGAGCCCGCTGACCTCTCGTCAGTTGTAAGA 1743 consensus_10891#0 TCCTCAAGAACTTCAGGAACCCATACGAGTGAA-----TGAACACCTTTAAATTATGAC- 1852 ********************** ********* *** * * * * ** * * consensus_10891#2 TAAAGATGACCCCGCTCGGTCGTGAGTCGTGACCCTGTATGTGAGTGCCCCCTGATGATG 606 consensus_10891#3 TAAAGATG-CCCCGCTCG-TCGTGA-TCG-GACACTGTATGGGAG-GACACCTGATGATG 272 consensus_10891#1 TAAAGATGACCCCGCTCGGTCGTGAGTCGTGACACTGTATGTGAGTGACACCTGATGATG 1803 consensus_10891#0 CATGGTTTTCAACTTTTTATCATGATGAGAGACTAGTCATATTCGGAGGGAATAGGGATG 1912 * * * * * * ** *** * *** ** * * **** consensus_10891#2 AAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTTTAAAAAAAAAAAAAAAAAAA-- 664 consensus_10891#3 AAGGA---TATTTTCAAG-CGA---ACTGCCGTTTTTTTAA------------------- 306 consensus_10891#1 AAGGAATATGTTGTCAAGGCGAGACATGGACGGTTTTCTACTTTACCTGCC--------- 1854 consensus_10891#0 CGCTG---CATTCCATAGTTTTGCAACTGTCAGAAATCTGGGATTGCTGAGGTTTAGGTC 1969 ** ** * * * * * consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 ------------------------------------------------------------ consensus_10891#0 TTGTAACTCTTGTAGGGCGTTTATTGTGGCATACTTTACCTTGTTGTATAACTGCATGCA 2029 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 ------------------------------------------------------------ consensus_10891#0 TAAGAATCTGAGAGCCATTGCTCAATTCTTTTCAACGAAGATGTGAACTGTTGGAAGCCC 2089 consensus_10891#2 ------------------------------------------------------------ consensus_10891#3 ------------------------------------------------------------ consensus_10891#1 ------------------------------------------------------------ consensus_10891#0 ATCGTAAACGGGAAGCGCTGTATGAAAGAATATGACGCACATCGTCTTTTGTTTGTTTAA 2149 consensus_10891#2 ------ consensus_10891#3 ------ consensus_10891#1 ------ consensus_10891#0 AAAACA 2155 |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||