|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10900#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 2129 fasta sequence
[AGATTGGTAGTAGTAGGCTGGTAGTAGCGCA--GATAGCCTCCTTCGTTATCCCCAAACCCCGCGCCGACGGGCGTCCTCCTCACCGACATTTCCTCCCACCCCCGCGCGCGCCCCGCCGCCTTTCTCGAACCTCCGCCGCATTCTTGTCACCTTGTTGATTCTTCATTCTTGATTTGTTCTCCTTTTTTTTTTGGTGATTTTGTTGTTTCTTGGCCTGCTACTGTTGGCGGCGGCGAGCGGTGGTCACCGGCCGTGCGTTCCCTTCTTTCTCCTCAGCCCTNGGNTCCCCCGCCGGCCGGACAAGNCGCCGGAGCTGAGTTGTTGAGGTTTTGCAGGGAAGGGATACACTCCGATCCCCAATGCCCCGCGTTTGGTCCGCCCCTGCATCCTCCTCCACAGATTGCTAGGCTTCACCGGAGATGATGGCGGCGCCGCAGCTACCGTGCTGCACTCGCCTCGCTCCGCCGTGTCCCGGGAAGGCGGCGGCGGAGGCAAGAACCCTGGCACGTTCACGGTTCAGGTGCTGTGCGGGGGCCGCGAGGCCTCGCTCGTTCCAGAAGAAAGACTCCTTCCTGGACCTCCACCCTGAGGTGACCCTCCTCCGCGGCGGCGACGAGGCGGCCGTCGTCGCCACGAGGAAGGGGTCTCCGAACGGGAGCCCGCTGGAGGGGCTGGGCGCGCCGCCGGATCACTGCGATTACGACGGGGCCAAGATCAAGGTCGTCGGGGTCGGCGGAGGAGGCTCCAATGCCGTCAACAGGATGATTGAGAGCTCCATGAACGGCGTCGAGTTCTGGATTGTGAATACCGATGTGCAGGCGATAAGGATGTCGCCGGTCCTTCCGCAGAACAGGTTGCAGATTGGGCAGGAGCTGACTCGGGGTCTAGGCGCAGGTGGAAACCCTGACATTGGGATGAATGCGGCGAAAGAAAGTGTCGAGTCCATTCAGGAAGCTCTTTACGGTGCTGATATGGTTTTTGTCACGGCTGGGATGGGTGGAGGCACTGGAACTGGAGGTGCCCCTGTAATCGCTGGAATTGCCAAGTCCATGGGTATACTGACAGTTGGCATCGTGACGACACCATTCTCATTTGAAGGGAGGAGACGGGCAGTTCAGGCTCAAGAAGGAATAGCAGCCTTGAGAAATAGTGTGGACACCCTCATTGTCATCCCAAATGACAAGCTGTTGTCTGCTGTTTCTCCAAATACTCCAGTAACCGAAGCATTCAACTTGGCTGATGATATTCTTCGACAAGGAATTCGTGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATGTTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGAAGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAATTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTGAGGTGAATTCTGCTGCTGAGATC-ATCTATGACCTTGTTGATCCAAATGCTAATCTGATATTTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGATTGCCAC-TGGCTTCAAACGTCAAGATGAACCA-GAAGGTCGCACCACAAAGGGTGGCC-AACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAGTAGGTCAAAATGATCATATGCCCCTACTCAAGTTGTGTTCATCTCACGAGGCTTTTACTCGGTTGAGAGCCTGGAGGTTCCTCTGTTTTATCGACATTGTGTGTGCATTGCCTGACAAGCATGGCAAATCGTATCCCTTAA]
[+] EMBL C26774 [AGATTGGTAGTAGTAGGCTGGTAGTAGCGCA GATAGCCTCCTTCGTTATCCCCAAACCCCGCGCCGACGGGCGTCCTCCTCACCGACATTTCCTCCCACCCCCGCGCGCGCCCCGCCGCCTTTCTCGAACCTCCGCCGCATTCTTGTCACCTTGTTGATTCTTCATTCTTGATTTGTTCTCCTTTTTTTTTTGGTGATTTTGTTGTTTCTTGGCCTGCTACTGTTGGCGGCGGCGAGCGGTGGTCACCGGCCGTGCGTTCCCTTCTTTCTCCTCAGCCCTNGGNTCCCCCGCCGGCCGGACAAGNCGCCGGAGCTGAGTTG ]
[+] EMBL AK100526 [ AGTAGCGCAGCGGTAGCCTCCTTCGTTATCCCCAAACCCCGCGCCGACGGGCGTCCTCCTCACCGACATTTCCTCCCACCCCCGCGCGCGCCCCGCCGCCTTTCTCGAACCTCCGCCGCATTCTTGTCACCTTGTTGATTCTTCATTCTTGATTTGTTCTCCTTTTTTTTTTGGTGATTTTGTTGTTTCTTGGCCTGCTACTGTTGGCGGCGGCGAGCGGTGGTCACCGGCCGTGCGTTCCCTTCTTTCTCCTCAGCCCTCGGCTCCCCCGCCGGCCGGACACGCCGCCGGAGCTGAGTTGTTGAGGTTTTGCAGGGAAGGGATACACTCCGATCCCCAATGCCCCGCGTTTGGTCCGCCCCTGCATCCTCCTCCACAGATTGCTAGGCTTCACCGGAGATGATGGCGGCGCCGCAGCTACCGTGCTGCACTCGCCTCGCTCCGCCGTGTCCCGGGAAGGCGGCGGCGGAGGCAAGAACCCTGGCACGTTCACGGTTCAGGTGCTGTGCGGGGGCCGCGAGGCCTCGCTCGTTCCAGAAGAAAGACTCCTTCCTGGACCTCCACCCTGAGGTGACCCTCCTCCGCGGCGGCGACGAGGCGGCCGTCGTCGCCACGAGGAAGGGGTCTCCGAACGGGAGCCCGCTGGAGGGGCTGGGCGCGCCGCCGGATCACTGCGATTACGACGGGGCCAAGATCAAGGTCGTCGGGGTCGGCGGAGGAGGCTCCAATGCCGTCAACAGGATGATTGAGAGCTCCATGAACGGCGTCGAGTTCTGGATTGTGAATACCGATGTGCAGGCGATAAGGATGTCGCCGGTCCTTCCGCAGAACAGGTTGCAGATTGGGCAGGAGCTGACTCGGGGTCTAGGCGCAGGTGGAAACCCTGACATTGGGATGAATGCGGCGAAAGAAAGTGTCGAGTCCATTCAGGAAGCTCTTTACGGTGCTGATATGGTTTTTGTCACGGCTGGGATGGGTGGAGGCACTGGAACTGGAGGTGCCCCTGTAATCGCTGGAATTGCCAAGTCCATGGGTATACTGACAGTTGGCATCGTGACGACACCATTCTCATTTGAAGGGAGGAGACGGGCAGTTCAGGCTCAAGAAGGAATAGCAGCCTTGAGAAATAGTGTGGACACCCTCATTGTCATCCCAAATGACAAGCTGTTGTCTGCTGTTTCTCCAAATACTCCAGTAACCGAAGCATTCAACTTGGCTGATGATATTCTTCGACAAGGAATTCGTGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATGTTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGAAGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAATTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTGAGGTGAATTCTGCTGCTGAGATC ATCTATGACCTTGTTGATCCAAATGCTAATCTGATATTTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGATTGCCAC TGGCTTCAAACGTCAAGATGAACCA GAAGGTCGCACCACAAAGGGTGGCC AACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAGTAGGTCAAAATGATCATATGCCCCTACTCAAGTTGTGTTCATCTCACGAGGCTTTTACTCGGTTGAGAGCCTGGAGGTTCCTCTGTTTTATCGACATTGTGTGTGCATTGCCTGACAAGCATGGCAAATCGTATCCCTTAA]
[+] EMBL BI805887 [ TTCTGCTGCTGAGATCNATCTATGACCTTG TGATCCAAATGCTAATCTGATATTTGTGGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGATTGCCACGTGGCTTC AACGTCAAGATGAACCATGAAGGTCGCACCACAAAGGGTGGCCTAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTNTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAaaaaaaaaa ]
consensusID : consensus_10900#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 733 fasta sequence
[TGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATGTTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGAAGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAATTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTGAGGTGAATTTTGCTGCTGAGATCATCTATGACCTTGTTGATCCAAATGCTAATCTGATATTTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGATTGCCACTGGCTTCAAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATATATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTTCTGTTAATAATTTGTAGCAAAGGGCTTGCTAATGCTATAGAAATCGTTTTATCCCACAAAAAAGGA]
[-] EMBL CB680531 [TGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATGTTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGAAGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAATTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTGAGGTGAATTTTGCTGCTGAGATCATCTATGACCTTGTTGATCCAAATGCTAATCTGATATTTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGATTGCCACTGGCTTCAAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATATATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTTCTGTTAATAATTTGTAGCAAAGGGCTTGCTAATGCTATAGAAATCGTTTTATCCCACAAAAAAGGA]
consensusID : consensus_10900#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence
[CCTAACTTTCTGGTCCAATACTCCAGTTATGGTNCCCTTACTCATTAGCTTTCGACAAATTTGTCCAACTCACCATTTCGCTTTTGTACCNCAATATTATGTATCACACTATAAGTTTTGCTTTCNTGCACCGCCAGGNGAGCATAACCCTGTGAGTTCGCCACTGGCTTTCAAAGCGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCNACTAACGCAAGGAGACCACACTGGTCGACGCCCATCCTCGTGCACGAAGGCAGCAGTGATTTGAGATTCCTGAGTTCCTTCCGTGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCTACGGCTCCCTTCCCTTGCCCAGTATCTANGCTTATCAGCATTCTCCTAGATCAGTCGCTCTCATGTAGGATACCAGGCATGTACAGTGACTTGTAGTNTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGCTTAATAATCTTGTAGACAATGAGCTTGCTAATGCCTATAGAAATCNTTTTATCCCAGTAAAAAAAAAA]
[+] EMBL BQ906633 [CCTAACTTTCTGGTCCAATACTCCAGTTATGGTNCCCTTACTCATTAGCTTTCGACAAATTTGTCCAACTCACCATTTCGCTTTTGTACCNCAATATTATGTATCACACTATAAGTTTTGCTTTCNTGCACCGCCAGGNGAGCATAACCCTGTGAGTTCGCCACTGGCTTTCAAAGCGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCNACTAACGCAAGGAGACCACACTGGTCGACGCCCATCCTCGTGCACGAAGGCAGCAGTGATTTGAGATTCCTGAGTTCCTTCCGTGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCTACGGCTCCCTTCCCTTGCCCAGTATCTANGCTTATCAGCATTCTCCTAGATCAGTCGCTCTCATGTAGGATACCAGGCATGTACAGTGACTTGTAGTNTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGCTTAATAATCTTGTAGACAATGAGCTTGCTAATGCCTATAGAAATCNTTTTATCCCAGTAAAAAAAAAA]
consensusID : consensus_10900#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 478 fasta sequence
[TGTACCTGAAATTATGTATGCACATAATTTTGTTTCTGCACGCAGGTGAGCATAACCTTGATTGCCACTGGCTTCAAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAGTA----AAAAAAAAAAAAAANAAANNNNANAAAAAAAAAAAAAA]
[+] EMBL BQ906654 [TGTACCTGAAATTATGTATGCACATAATTTTGTTTCTGCACGCAGGTGAGCATAACCTTGATTGCCACTGGCTTCAAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTCTGCAGAAGGCAGCATGATTGAGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCAGGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAGTA AAAAAAAAAA ]
[+] EMBL C96885 [ GCCAACAAACGCAAGGAGACAATGGTCGACGCCCATCCTNTGCAGAAGGCAGCATGATTGNGATTCCTGAGTTCCTTCGGAGGAGAGGACCTTCTCGCTTCCCGCGAGTNTGACTGCCCAGGCTCCCTTCCCTTGCCNAGTATCTATGCTTATCAGCATTCTCCTAGATCAGTCGCCTCATGTAGGATACCAGGCATGTACAGTACTGTAGTTGTTTGGTTGTTCAGTTTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGTTAATAATTTGTAGCAATGAGCTTGCTAATGCTATAGAAATCGTTTTATCCCAGTAGGTCAAAAAAAAAAAAAANAAANNNNANAAAAAAAAAAAAAA]
consensusID : consensus_10900#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 197 fasta sequence
[NYGTCAGAGAGMTCTCTGCTCASTAGTACTCTCGCGCGCGCGAGCGCGTGTGCAGAGAGGGCTCGACGGAGCGCTGAGGGCTKGCGCGCGCGATCACTGCGATACGACGGGACAGATCACGTCGTCGGKGTCGCGGAGGAGTCTCAATGCCGWCACAGGATGATTGAGAGCTCCATGAACGGCGTCGAGTTCTTGAT]
[+] EMBL AA754266 [NYGTCAGAGAGMTCTCTGCTCASTAGTACTCTCGCGCGCGCGAGCGCGTGTGCAGAGAGGGCTCGACGGAGCGCTGAGGGCTKGCGCGCGCGATCACTGCGATACGACGGGACAGATCACGTCGTCGGKGTCGCGGAGGAGTCTCAATGCCGWCACAGGATGATTGAGAGCTCCATGAACGGCGTCGAGTTCTTGAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 AGATTGGTAGTAGTAGGCTGGTAGTAGCGCAGATAGCCTCCTTCGTTATCCCCAAACCCC 60
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 GCGCCGACGGGCGTCCTCCTCACCGACATTTCCTCCCACCCCCGCGCGCGCCCCGCCGCC 120
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TTTCTCGAACCTCCGCCGCATTCTTGTCACCTTGTTGATTCTTCATTCTTGATTTGTTCT 180
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CCTTTTTTTTTTGGTGATTTTGTTGTTTCTTGGCCTGCTACTGTTGGCGGCGGCGAGCGG 240
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TGGTCACCGGCCGTGCGTTCCCTTCTTTCTCCTCAGCCCTNGGNTCCCCCGCCGGCCGGA 300
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CAAGNCGCCGGAGCTGAGTTGTTGAGGTTTTGCAGGGAAGGGATACACTCCGATCCCCAA 360
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TGCCCCGCGTTTGGTCCGCCCCTGCATCCTCCTCCACAGATTGCTAGGCTTCACCGGAGA 420
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TGATGGCGGCGCCGCAGCTACCGTGCTGCACTCGCCTCGCTCCGCCGTGTCCCGGGAAGG 480
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CGGCGGCGGAGGCAAGAACCCTGGCACGTTCACGGTTCAGGTGCTGTGCGGGGGCCGCGA 540
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 GGCCTCGCTCGTTCCAGAAGAAAGACTCCTTCCTGGACCTCCACCCTGAGGTGACCCTCC 600
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TCCGCGGCGGCGACGAGGCGGCCGTCGTCGCCACGAGGAAGGGGTCTCCGAACGGGAGCC 660
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CGCTGGAGGGGCTGGGCGCGCCGCCGGATCACTGCGATTACGACGGGGCCAAGATCAAGG 720
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TCGTCGGGGTCGGCGGAGGAGGCTCCAATGCCGTCAACAGGATGATTGAGAGCTCCATGA 780
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 ACGGCGTCGAGTTCTGGATTGTGAATACCGATGTGCAGGCGATAAGGATGTCGCCGGTCC 840
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TTCCGCAGAACAGGTTGCAGATTGGGCAGGAGCTGACTCGGGGTCTAGGCGCAGGTGGAA 900
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 ACCCTGACATTGGGATGAATGCGGCGAAAGAAAGTGTCGAGTCCATTCAGGAAGCTCTTT 960
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 ACGGTGCTGATATGGTTTTTGTCACGGCTGGGATGGGTGGAGGCACTGGAACTGGAGGTG 1020
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CCCCTGTAATCGCTGGAATTGCCAAGTCCATGGGTATACTGACAGTTGGCATCGTGACGA 1080
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CACCATTCTCATTTGAAGGGAGGAGACGGGCAGTTCAGGCTCAAGAAGGAATAGCAGCCT 1140
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TGAGAAATAGTGTGGACACCCTCATTGTCATCCCAAATGACAAGCTGTTGTCTGCTGTTT 1200
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CTCCAAATACTCCAGTAACCGAAGCATTCAACTTGGCTGATGATATTCTTCGACAAGGAA 1260
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ----TGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATG 56
consensus_10900#0 TTCGTGGTATCTCTGATATTATCACGGTTCCTGGGTTGGTTAATGTTGATTTTGCTGATG 1320
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 TTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGA 116
consensus_10900#0 TTCGAGCCATCATGCAAAATGCAGGCTCATCCTTGATGGGTATTGGAACGGCTACAGGGA 1380
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 AGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAA 176
consensus_10900#0 AGTCAAGAGCAAGAGATGCTGCTCTTAATGCCATTCAGTCACCACTGCTAGACATTGGAA 1440
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 --------CCTAACTTTCTGGTCCAATACTCCAGTTATGGTNCCCTTACTCATTAGCTTT 52
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 TTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTG 236
consensus_10900#0 TTGAAAGAGCTACAGGCATTGTGTGGAATATCACTGGGGGAGCTGATATGACTTTGTTTG 1500
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 CGACAAATTT----GTCCAACTCACCATTTCGCTTTTGTACCNCAATATTA------TGT 102
consensus_10900#3 ------------------------------------TGTACCTGAA-ATTA------TGT 17
consensus_10900#1 AGGTGAATTTTGCTGCTGAGATCATCTATGACCTTGTTGATCCAAATGCTAATCTGATAT 296
consensus_10900#0 AGGTGAATTCTGCTGCTGAGATCATCTATGACCTTGTTGATCCAAATGCTAATCTGATAT 1560
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ATCACACTATAAGTTTTGCTTTCNTGCACCGCCAGGNGAGCATAACCCTGTGAGTTCGCC 162
consensus_10900#3 AT-GCAC-ATAA-TTTTGTTTCTGCACGC----AGGTGAGCATAACCTTGA----TTGCC 66
consensus_10900#1 TTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGA----TTGCC 352
consensus_10900#0 TTGGTGCTGTCATAGACCCATCACTCAATGGCCAAGTGAGCATAACCTTGA----TTGCC 1616
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ACTGGCTTTCAAAGCGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCNACTAA 222
consensus_10900#3 ACTGGCTTC--AAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAA 124
consensus_10900#1 ACTGGCTTC--AAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAA 410
consensus_10900#0 ACTGGCTTC--AAACGTCAAGATGAACCAGAAGGTCGCACCACAAAGGGTGGCCAACAAA 1674
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 CGCAAGGAGACCACACTGGTCGACGCCCATCCTCGTGCACGAAGGCAGCAGTGATTTGAG 282
consensus_10900#3 CGCAAGGAGACAA---TGGTCGACGCCCATCCTC-TGCA-GAAGGCAGCA-TGATT-GAG 177
consensus_10900#1 CGCAAGGAGACAA---TGGTCGACGCCCATCCTC-TGCA-GAAGGCAGCA-TGATT-GAG 463
consensus_10900#0 CGCAAGGAGACAA---TGGTCGACGCCCATCCTC-TGCA-GAAGGCAGCA-TGATT-GAG 1727
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ATTCCTGAGTTCCTTCCGTGAGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCT 342
consensus_10900#3 ATTCCTGAGTTCCTTCGG--AGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCA 235
consensus_10900#1 ATTCCTGAGTTCCTTCGG--AGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCA 521
consensus_10900#0 ATTCCTGAGTTCCTTCGG--AGGAGAGGACCTTCTCGCTTCCCGCGAGTCTGACTGCCCA 1785
consensus_10900#4 NYGTCAGAGAGMTCTCTGCTCAST-AGTACTCTCGCGCG---CGCGAGCGCGTGTGCAGA 56
* *** ** * ** ** ** *** ****** * ***
consensus_10900#2 ACGGCTCCCTTCCCTTGCCCAGTATCTANGCTTATCAGCATTCTCCTA------GATCAG 396
consensus_10900#3 --GGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTA------GATCAG 287
consensus_10900#1 --GGCTCCCTTCCCTTGCCCAGTATATATGCTTATCAGCATTCTCCTA------GATCAG 573
consensus_10900#0 --GGCTCCCTTCCCTTGCCCAGTATCTATGCTTATCAGCATTCTCCTA------GATCAG 1837
consensus_10900#4 GAGGGCTCGACGGAGCGCTGAGGGCTKGCGCGCGCGATCACTGCGATACGACGGGACAGA 116
** * ** ** ** * ** * ** **
consensus_10900#2 TCGCTCTCATGTAGGATACCAGGCATGTACAGTGACTTGTAGTNTGTTTGGTTGTTCAGT 456
consensus_10900#3 TCGC-CTCATGTAGGATACCAGGCATGTACAGTA--CTGTAGTT-GTTTGGTTGTTCAGT 343
consensus_10900#1 TCGC-CTCATGTAGGATACCAGGCATGTACAGTA--CTGTAGTT-GTTTGGTTGTTCAGT 629
consensus_10900#0 TCGC-CTCATGTAGGATACCAGGCATGTACAGTA--CTGTAGTT-GTTTGGTTGTTCAGT 1893
consensus_10900#4 TCAC-GTCGTCGGKGTCGCGGAGGAGTCTCAATG--CCGWCACA-GGATGATTGAG-AGC 171
** * ** * * * * * ** * * * ** *** **
consensus_10900#2 TTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTGCTTAATAATCTTGTAGACA 516
consensus_10900#3 TTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTG-TTAATAAT-TTGTAG-CA 400
consensus_10900#1 TTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTTCTG-TTAATAAT-TTGTAG-CA 686
consensus_10900#0 TTTGTTTACTCCCTTATGTTCTATATTTTGAGATCTTACTG-TTAATAAT-TTGTAG-CA 1950
consensus_10900#4 TCCATGAACGGCGTCGAGTTCTTGAT---------------------------------- 197
* * ** * * ***** **
consensus_10900#2 ATGAGCTTGCTAATGCCTATAGAAATCNTTTTATCCCAGTAAAAAAAAAA---------- 566
consensus_10900#3 ATGAGCTTGCTAATGC-TATAGAAATCGTTTTATCCCAGTAAAAAAAAAAAAAAANAAAN 459
consensus_10900#1 AAGGGCTTGCTAATGC-TATAGAAATCGTTTTATCCCACAAAAAAGGA------------ 733
consensus_10900#0 ATGAGCTTGCTAATGC-TATAGAAATCGTTTTATCCCAGTAGGTCAAAATGATCATATGC 2009
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 NNNANAAAAAAAAAAAAAA----------------------------------------- 478
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 CCCTACTCAAGTTGTGTTCATCTCACGAGGCTTTTACTCGGTTGAGAGCCTGGAGGTTCC 2069
consensus_10900#4 ------------------------------------------------------------
consensus_10900#2 ------------------------------------------------------------
consensus_10900#3 ------------------------------------------------------------
consensus_10900#1 ------------------------------------------------------------
consensus_10900#0 TCTGTTTTATCGACATTGTGTGTGCATTGCCTGACAAGCATGGCAAATCGTATCCCTTAA 2129
consensus_10900#4 ------------------------------------------------------------
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||