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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10902#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 897 fasta sequence
[TTTTTTTTGCTTTCTCAGATATTTCATAAAAAGGACTCTCTACGGATCCCCACCAATGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATTGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGATTGGTTTGATCAAAAACTTGAG-ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT-TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTT-TCAAGTGATTCATATCGTCATCGTCAA-GTATA-CCCGTTTCAAA-TTTCATTCC-AATCAAATGAT-CCGTAGCGGCCAATACATCTCGCGGTAACAAGAAGGTGCTGTTCTGAGGTATATCAAGATTCAGTCTTCGATTCATATTTCGTCGACCAATCCTTCCTAATTCACATTTTTGTTGAAAAAATTTCTTTTGTAATTCCTCACATAAGGATTCCGAAAATACCAGGTCCCCACCTACACAAGCAAATTGTTGATAAAACTCCAAAATAGCTTTTTCTTTTGACTCAATCCTCTTCTTCTCCTTAGCATTAGGGAAAGACAAGAAAATTTCAGGGTAGGAAACATTATCTAGAATTTCTTTTAGATTTAAACCCATAGCTGATAATAGAACTAGAATAGATATCTTTTGTTTTCTACTCA]
[-] EMBL AU174742 [TTTTTTTTGCTTTCTCAGATATTTCATAAAATGGACTCTCTACGGATCCCCACCAATGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATTGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGATTGGTTTGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAA ]
[-] EMBL BI801303 [ TTTTTGGCTTTCTCAGATATTTCATAAAAAGGACTCTCTACGGATCCCCACCAAGGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATGGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGA CCAAACAACTCACTTTTCGCCCATGAACCG TTGTGTCAATGGA TGGTTGGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAG TTGTGGAGTCGG TTTGATGTGACGTATGAATACTCTACGGATAG TTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAAT ]
[+] EMBL AU172328 [ TTTTTGCTTTCTCAGATATTTCATAAAAAGGACTCTCTACGGATCCCCACCAATGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATTGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGATTGGTTTGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAA ]
[-] EMBL BI801171 [ TTTTGCTTTCTCAGATATTTCATAAAAAGGACTCTCTACGGATCCCCACCAATGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATTGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGA TGGTTTGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTGGTGGAGTCGG TTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGA CAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTTCTCAAGTGATTCATATCGTCATCGTCAACGTATACCCCGTTTCAAATTTTCATTCCAAATCAAATGATCCCGTAG GGCAAATA ]
[+] EMBL CB623797 [ gGATATTTCATAAAAAGGACTCTCTACGGATCCCCATCAATGATCAATTCTCGCATGAATAGCTAAAGATCCAGTAAGTCCAACGTTGATTCCTTCGGACGTGTCAATTGGACAAATACGCCCATAGTGACTCGGATGGATATCTCGGCTCCGAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGATTGGTTTGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTT TCAAGTGATTCATATCGTCATCGTCAA GTATA CCCGTTTCAAA TTTCATTCC AATCAAATGAT CCGTAGCGGCCAATACATCTCGCGGTAACAAGAAGGTGCTGTTCTGAGGTATATCAAGATTCAGTCTTCGATTCATATTTCGTCGACCAATCCTTCCTAATTCACATTTTTGTTGAAAAAATTTCTTTTGTAATTCCTCACATAAGGATTCCGAAAATACCAGGTCCCCACCTACACAAGCAAATTGTTGATAAAACTCCAAAATAGCTTTTTCTTTTGACTCAATCCTCTTCTTCTCCTTAGCATTAGGGAAAGACAAGAAAATTTCAGGGTAGGAAACATTATCTAGAATTTCTTTTAGA TTAAAC ]
[-] EMBL AU174743 [ GAAAACTTGCAGTTCTCCCCGTCAATCCTCCAGGACCCAAACAACTCACTTTTCGCCCATGAACCGTTTGTGTCAATGGATTGGTTTGATCAAAAACTTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTT TCAAGTGATTCATATCGTCATCGTCAA GTATA CCCGTTTCAAA TTTCATTCC AATCAAATGAT CCGTAGCGGCCAAT ]
[-] EMBL CA767499 [ CCAGGACCC AACGACTC CCTTTCGCCCATGANCCG TTGTG CCATGGATTGGTTNGATCAAAAACCTGAG ATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGANCCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTT TCAAGTGATTCATATCGTCATCGTCAA GTATA CCCGTTTCAAA TTTCATTCC AATCAAATGAT CCGTAGCGGCCAATACATCTCGCGGTAACAAGAAGGTGCTGTTCTGAGGTATATCAAGATTCAGTCTTCGATTCATATTTCGTCGACCAATCCTTCCTAATTCACATTTTTGTTGAAAAAATTTCTTTTGTAATTCCTCACATAAGGATTCCGAAAATACCAGGTCCCCACCTACACAAGCAAATTGTTGATAAAACTCCAAAATAGCTTTTTCTTTTGACTCAATCCTCTTCTTCTCCTTAGCATTAGGGAAAGACAAGAAAATTTCAGGGTAGGAAACATTATCTAGAATTTCTTTTAGATTTAAACCCATAGCTGATAATAGAACTAGAATAGATATCTTTTGTTTTCTACTCA]
[-] EMBL CB633848 [ TGATCAAAAAC TGAGNATAAGGGATATGTACCAAAGAAGGTCTCGTAAGTAGTTATTAATAAAATCGAGGTTGAAGTTGGAGTTACCAAAGTTTGTGGAGTCGGTTTTGAT TGACGTATGAATACTCTACGGATAGTTTTTTGAACCGCATGTTGTAAACGACCAAGAGCCAGTCCGAATTGATCTTGTAACAGATCCGCAACCGAACGAATACGTTTATTTT TCAAGTGATTCATATCGTCATCGTCAA GTATA CCCGTTTCAAA TTTCATTCC AATCAAATGAT CCGTAGCGGCCAATACATCTCGCGGTAACAAGAAGGTGCTGTTCTGAGGTATATCAAGATTCAGTCTTCGATTCATATTTCGTCGACCAATCCTTCCTAATTCACATTTTTGTTGAAAAAATTTCTTTTGTAATTCCTCACATAAGGATTCCGAAAATACCAGGTCCCCACCTACACAAGCAAATTGTTGATAAAACTCCAAAATAGCTTTTTCTTTTGACTCAATCCTCTTCTTCTCCTTAGCATTAGGGAAAGACAAGAAAATTTCAGGGTAGGAAACATTATCTAGAATTTCTTTTAGATTTGAACCCATAGCTGATGATAGAACTAGAATAGATATCTTTTGTTTTCTACTCA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||