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Oryza sativa
cluster # 10925 cluster # 10925       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10925#0 length = 1885 sequences # 5  
consensus_10925#1 length = 621 sequences # 2  
consensus_10925#2 length = 546 sequences # 1  

consensusID : consensus_10925#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1885
fasta sequence
                              [CTGGACTGAAGGAGTAGAAAAGTTTAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTGAAGGCTGAAT-GGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGCGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATACGGCAGAA-GGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGTATAT-TTGGTTTGCTCAGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGA-TTGGGTGCTGGCCATGTGCTGTCCACTTGGTT-ATAGAGTTTGTTCCTGCTGCAAAGAGAGGTACCTGGATGGTCGTTTTCCATTGCTCTTGGACTGTGGGAACAATCTTGGAAGCTCTGCTTGCCTGGGCTGTCATGCCAGTACTTGGGTGGAGGTGGCTGCTTGCATTGTCTTCGGCCCCATGTTTTATCCTGTTCATTTTCTTCCCCGTAACACCTGAATCACCAAGGTATCTATGCTCAGTAGGAAGAACAATGGACGCTAGGGTCATCTTGGAAAAAATAGCAAGAATGAACAATAGCTCTCTCCCTCCTGGCATACTGACTTATGCCTCCACAAGGAGAATCGACAAAGTGCTCGATGATTCTGAGACAGCACTTCTAATTACAGAAGATGGTGGTTCTGGAATTGATGAGCATACAAGTTCCAAGCCTGGTGGAATTACTGCACTTCGAGAATCTTGGTCATATGATCTAATAAGATCAACCTTTCTTCTTTGGTTTGTCTATCTTGCAAATTATTTTGCTTACTATGGGGTAATATTGTTGACCTCTGAACTGAGCAATGGTCAGAGAAGGTGTGCATCAGTTGGGATAAATTTTATGCAACCAAAGGATGCCAACCTTTACAGAGATGTGCTAGTGACCAGTTTGGCAGAATTTCCAGGTCTGGTTTTGGCGGCTCTATTGGTTGACAGAATT-GGTCGG-AAAGTGTCACTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCC-GGACTTGCATCATGGGAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAAT-CCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAAGATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGAAATGCACCAGCTAGCTCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAACAACTGTATTAAATTTTGAAACTCATGAAAGGGTTGGATTAAATTTTGGATTAAAGTGGCATGCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL CF276884             [CTGGACTGAAGGAGTAGAAAAGTTTAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTGAAGGCTGAATGGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGCGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATACGGCAGAAGGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGTATATNTTGGTTTGCTCAGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGATTTGGGTGCTGGCCATGTGCTGTCCACTTGGTT ATAGAGTTTGTTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AK067178             [                     GTTCAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTGAAGGCTGAAT GGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGCGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATACGGCAGAA GGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGTATAT TTGGTTTGCTCAGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGA TTGGGTGCTGGCCATGTGCTGTCCACTTGGTTCATAGAGTTTGTTCCTGCTGCAAAGAGAGGTACCTGGATGGTCGTTTTCCATTGCTCTTGGACTGTGGGAACAATCTTGGAAGCTCTGCTTGCCTGGGCTGTCATGCCAGTACTTGGGTGGAGGTGGCTGCTTGCATTGTCTTCGGCCCCATGTTTTATCCTGTTCATTTTCTTCCCCGTAACACCTGAATCACCAAGGTATCTATGCTCAGTAGGAAGAACAATGGACGCTAGGGTCATCTTGGAAAAAATAGCAAGAATGAACAATAGCTCTCTCCCTCCTGGCATACTGACTTATGCCTCCACAAGGAGAATCGACAAAGTGCTCGATGATTCTGAGACAGCACTTCTAATTACAGAAGATGGTGGTTCTGGAATTGATGAGCATACAAGTTCCAAGCCTGGTGGAATTACTGCACTTCGAGAATCTTGGTCATATGATCTAATAAGATCAACCTTTCTTCTTTGGTTTGTCTATCTTGCAAATTATTTTGCTTACTATGGGGTAATATTGTTGACCTCTGAACTGAGCAATGGTCAGAGAAGGTGTGCATCAGTTGGGATAAATTTTATGCAACCAAAGGATGCCAACCTTTACAGAGATGTGCTAGTGACCAGTTTGGCAGAATTTCCAGGTCTGGTTTTGGCGGCTCTATTGGTTGACAGAATT GGTCGG AAAGTGTCACTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCC GGACTTGCATCATGGGAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAAT CCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAAGATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGAAATGCACCAGCTAGCTCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAACAACTGTATTAAATTTTGAAACTCATGAAAGGGTTGGATTAAATTTTGGATTAAAGTGG                                          ]
[+] EMBL OSC2061              [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           GCTCTATTGGTTGACAGAATT GGTCGG AAAGTGTCACTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCC GGACTTGCATCATGGGAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGT ACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCG CCTCATCCCTCTAGAGACCAAGGGCCGG                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL AU163990             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              tTATTGGTTGACAGAATTGGGTCGGAAAAGTGTCACTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTG ACATTTGGGACAAGGTTCAGTAACTACTCTTNTATTCTGTGCCCGGGACTTGCATCATGGAAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAAT CCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAAGATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGAAATGCACCAGCTAGCTCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAACAACTGTATTAAATTTTGAAACTCATGAAAGGGTTGGATTAAAaaaaaaaa                                                  ]
[+] EMBL AU056192             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGNCCAAGGGCCGGCAAATCCCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTNCATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACNCCTGCCAAAATTCACTGACATTTTGGATTCAACNAAGATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGAAATGCACCAGCTAGCTCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAACAACTGTATTAAATTTTGAAACTCATGAAAGGGTTGGATTAAATTTTGGATTAAAGTGGCATGCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_10925#0 CTGGACTGAAGGAGTAGAAAAGTTTAACACCATCCAGCCATCCACCTTCCCCCTGAGTGT AGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGAC CTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCT CGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGT GGGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAG CGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATA CGGCAGAAGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGTATATTTGGTTTGCTCAG TGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGATT GGGTGCTGGCCATGTGCTGTCCACTTGGTTATAGAGTTTGTTCCTGCTGCAAAGAGAGGT ACCTGGATGGTCGTTTTCCATTGCTCTTGGACTGTGGGAACAATCTTGGAAGCTCTGCTT GCCTGGGCTGTCATGCCAGTACTTGGGTGGAGGTGGCTGCTTGCATTGTCTTCGGCCCCA TGTTTTATCCTGTTCATTTTCTTCCCCGTAACACCTGAATCACCAAGGTATCTATGCTCA GTAGGAAGAACAATGGACGCTAGGGTCATCTTGGAAAAAATAGCAAGAATGAACAATAGC TCTCTCCCTCCTGGCATACTGACTTATGCCTCCACAAGGAGAATCGACAAAGTGCTCGAT GATTCTGAGACAGCACTTCTAATTACAGAAGATGGTGGTTCTGGAATTGATGAGCATACA AGTTCCAAGCCTGGTGGAATTACTGCACTTCGAGAATCTTGGTCATATGATCTAATAAGA TCAACCTTTCTTCTTTGGTTTGTCTATCTTGCAAATTATTTTGCTTACTATGGGGTAATA TTGTTGACCTCTGAACTGAGCAATGGTCAGAGAAGGTGTGCATCAGTTGGGATAAATTTT ATGCAACCAAAGGATGCCAACCTTTACAGAGATGTGCTAGTGACCAGTTTGGCAGAATTT CCAGGTCTGGTTTTGGCGGCTCTATTGGTTGACAGAATTGGTCGGAAAGTGTCACTGGGG ATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGT TCAGTAACTACTCTTCTATTCTGTGCCCGGACTTGCATCATGGGAGGCTTTGCTGTTCTA TACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACA TCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAG AACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTG GCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAGTGAGGCAGTGATGCT TTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTC TTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAA GATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGAAATGCACCAGCTAGC TCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAACAACTGTATTAAATTT TGAAACTCATGAAAGGGTTGGATTAAATTTTGGATTAAAGTGGCATGCTTTTCAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10925#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 621
fasta sequence
                              [TCTGATCTTGGCAGTCAACAGTTCAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGCGTCGTC-TTCGCCGGGATGCTCATCGGCGCCTGCC-TCGGAGGCCTCATCTCGGACAGATACGGCAGAAGGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGGTATATTTGGTTTGCTCAGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGATTGGGTGCTGGCCATGTGCTGTCCACTTGGGTTCATAGAAGTTTGTTCCCTGCTGCAAAGAAGAGTAACTGGATGGTCGTTTTTCCAATTGCTCTTGGACTGTGGGGNAACAAATCTTTGGAAAGCTCTGCTTGCCTGGGGC]

[+] EMBL AU056191             [TCTGATCTTGGCAGTCAACAGTTCAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGCGTCGTC TTCGCCGGGATGCTCATCGGCGCCTGCC TCGGAGGCCTCATCTCGGACAGATACGGCAGAAGGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGGTATATTTGGTTTGCTCAGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGATTGGGTGCTGGCCATGTGCTGTCCACTTGGGTTCATAGAAGTTTGTTCCCTGCTGCAAAGAAGAGTAACTGGATGGTCGTTTTTCCAATTGCTCTTGGACTGTGGGGNAACAAATCTTTGGAAAGCTCTGCTTGCCTGGGGC]
[+] EMBL OSS11216A            [                                                          TAGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACCTACACGACGGACGACGCGCTCACGC NGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTCGCCTACGCCTGCTTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTGGGCCCGTCCGTAAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCANCAGCGTCGTCTTTCGCCGGGATGCTCATCGGCGCCTTCCTTCGGAGGCCTCATCTCGGA                                                                                                                                                                                                                                                                            ]


>consensus_10925#1 TCTGATCTTGGCAGTCAACAGTTCAACACCATCCAGCCATCCACCTTCCCCCTGAGTGTA GCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGACC TACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCTC GCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGTG GGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAGC GTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATAC GGCAGAAGGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGGTATATTTGGTTTGCTCA GTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGAT TGGGTGCTGGCCATGTGCTGTCCACTTGGGTTCATAGAAGTTTGTTCCCTGCTGCAAAGA AGAGTAACTGGATGGTCGTTTTTCCAATTGCTCTTGGACTGTGGGGNAACAAATCTTTGG AAAGCTCTGCTTGCCTGGGGC



consensusID : consensus_10925#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 546
fasta sequence
                              [CTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCCGGACTTGCATCATGGGAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAAGATGTGTTCACCTTTCAAAAAAAAAAAAAAAAAAAAAGTCATGCCGTTACGTAGCGTATC]

[-] EMBL CF276885             [CTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCCGGACTTGCATCATGGGAGGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAGTGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTCAACAAAGATGTGTTCACCTTTCAAAAAAAAAAAAAAAAAAAAAGTCATGCCGTTACGTAGCGTATC]


>consensus_10925#2 CTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTACATTTGGGA CAAGGTTCAGTAACTACTCTTCTATTCTGTGCCCGGACTTGCATCATGGGAGGCTTTGCT GTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACGGGGGTAGGA ATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACTGTTAGTTTG TCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTCTTTCTAGCA GCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAGTGAGGCAGT GATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTGGAGACTAGG GCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACATTTTGGATTC AACAAAGATGTGTTCACCTTTCAAAAAAAAAAAAAAAAAAAAAGTCATGCCGTTACGTAG CGTATC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10925#0      CTGGACTGAAGGAGTAGAAAAGTTTAACACCATCCAGCCATCCACCTTCCCCCTGAGTGT 60
consensus_10925#1      TCTGATCTTGGCAGTC-AACAGTTCAACACCATCCAGCCATCCACCTTCCCCCTGAGTGT 59
consensus_10925#2      ---------------------------------CTGGGGATCATGCTTTTGTTGTCCTGT 27
                                                        *  *  ***   ***         ***

consensus_10925#0      AGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGAC 120
consensus_10925#1      AGCGTGCGCGGCCATGGCGGGCGGAGACGCCGAGGAGGAGGAGGAGGAGGAGGAGGAGAC 119
consensus_10925#2      GCTTTCCTTG--CACCACTTGCTGTACATTTG----GGACAAGGTTCAGTAACTACTCTT 81
                           * *  *  **   *  ** *       *    ***  ***   ** *         

consensus_10925#0      CTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCT 180
consensus_10925#1      CTACACGACGGACGACGCGCTCACGCGCGCCGGCTTCGGCAGGTTCCAGGCCCTGGTGCT 179
consensus_10925#2      CTATTCTGTGCCCGG-ACTTGCATCATGGGAGGCTTTGCT--GTTCTATACGTGTATACC 138
                       ***  *   *  **   *   **     *  ***** *    **** *  *     * * 

consensus_10925#0      CGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGT 240
consensus_10925#1      CGCCTACGCCTGCGTGGGGTGGGTCGCGGAGGCCATGGAGGTGATGCTGCTGTCGTTCGT 239
consensus_10925#2      C-CTGAGATCTATCCTGCATCA-TCTCGCAA--CACGGGGGTAGGAATCACATCTTCCTT 194
                       * *  *   **     *  *   ** ** *   ** ** ***     *    ** * * *

consensus_10925#0      GGGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAG 300
consensus_10925#1      GGGCCCGTCCGTGAAGGCTGAATGGGGGGTGTCCGGCGCGGCGGAGGGGCTCGTCAGCAG 299
consensus_10925#2      TGGCCGGATTG-----GCAGTATAGTTT-CACCTGTGGTGACTGTTAG-TTTGTCAG-AG 246
                        **** *   *     ** * ** *       * *  * * * *   *  * ***** **

consensus_10925#0      CGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATA 360
consensus_10925#1      CGTCGTCTTCGCCGGGATGCTCATCGGCGCCTGCCTCGGAGGCCTCATCTCGGACAGATA 359
consensus_10925#2      AACTGCC---GCCAGAAAG--AAGCAGTGTTTTTCATGGA--CCTGATGCTCTTTCTA-G 298
                           * *   *** * * *   * * * *  *  *  ***  *** **         *  

consensus_10925#0      CGGCAGAAGG-ATCGGTTTTCTTTCCACGGCAGTTGTCACTGG-TATATTTGGTTTGCTC 418
consensus_10925#1      CGGCAGAAGGGATCGGTTTTCTTTCCACGGCAGTTGTCACTGGGTATATTTGGTTTGCTC 419
consensus_10925#2      CAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAGTGAGG-C 357
                       * ****  *    **   *  *  *    *            *  * **   **  *  *

consensus_10925#0      AGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGA 478
consensus_10925#1      AGTGCCTTCTCCCCCAACTACGCATCCTTGCTCGTCCTCCGCTTTGTTGTTGGTTTGGGA 479
consensus_10925#2      AGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTG--GTCAATTGGAGA 415
                       ****     * *  **  *     * *    **    * *  ****  **   ** * **

consensus_10925#0      TTGGGTGCTGGCCATGTGCTGTCCACTTGG--TTATAGA-GTTTGTTCC-TGCTGCAAAG 534
consensus_10925#1      TTGGGTGCTGGCCATGTGCTGTCCACTTGGGTTCATAGAAGTTTGTTCCCTGCTGCAAAG 539
consensus_10925#2      CTAGG--------GCATTCTTTCTTATCCAGCACATA----TTTACACC-TGC--CAAAA 460
                        * **           * ** **   *       ***    ***   ** ***  **** 

consensus_10925#0      AGAGGTACCTGGATGGTCGTTTTCC--ATTGCTCTTGGACTGTGGGAACA---ATCTT-- 587
consensus_10925#1      AAGAGTAACTGGATGGTCGTTTTTCCAATTGCTCTTGGACTGTGGGGNAACAAATCTTTG 599
consensus_10925#2      TTCACTGACATTTTGGAT-TCAACAAAGATGTGTTCACCTTTCAAAAAAAAAAAAAAAAA 519
                            *  *    ***   *         **   *     *        *   *      

consensus_10925#0      GGAAGCTCTGC--TTGCCTGGGCTGTCATGCCAGTACTTGGGTGGAGGTGGCTGCTTGCA 645
consensus_10925#1      GAAAGCTCTGC--TTGCCTGGGGC------------------------------------ 621
consensus_10925#2      AAAAGTCATGCCGTTACGTAGCGTATC--------------------------------- 546
                         ***   ***  ** * * *                                       

consensus_10925#0      TTGTCTTCGGCCCCATGTTTTATCCTGTTCATTTTCTTCCCCGTAACACCTGAATCACCA 705
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AGGTATCTATGCTCAGTAGGAAGAACAATGGACGCTAGGGTCATCTTGGAAAAAATAGCA 765
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AGAATGAACAATAGCTCTCTCCCTCCTGGCATACTGACTTATGCCTCCACAAGGAGAATC 825
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GACAAAGTGCTCGATGATTCTGAGACAGCACTTCTAATTACAGAAGATGGTGGTTCTGGA 885
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      ATTGATGAGCATACAAGTTCCAAGCCTGGTGGAATTACTGCACTTCGAGAATCTTGGTCA 945
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TATGATCTAATAAGATCAACCTTTCTTCTTTGGTTTGTCTATCTTGCAAATTATTTTGCT 1005
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TACTATGGGGTAATATTGTTGACCTCTGAACTGAGCAATGGTCAGAGAAGGTGTGCATCA 1065
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GTTGGGATAAATTTTATGCAACCAAAGGATGCCAACCTTTACAGAGATGTGCTAGTGACC 1125
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AGTTTGGCAGAATTTCCAGGTCTGGTTTTGGCGGCTCTATTGGTTGACAGAATTGGTCGG 1185
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AAAGTGTCACTGGGGATCATGCTTTTGTTGTCCTGTGCTTTCCTTGCACCACTTGCTGTA 1245
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      CATTTGGGACAAGGTTCAGTAACTACTCTTCTATTCTGTGCCCGGACTTGCATCATGGGA 1305
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GGCTTTGCTGTTCTATACGTGTATACCCCTGAGATCTATCCTGCATCATCTCGCAACACG 1365
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GGGGTAGGAATCACATCTTCCTTTGGCCGGATTGGCAGTATAGTTTCACCTGTGGTGACT 1425
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GTTAGTTTGTCAGAGAACTGCCGCCAGAAAGAAGCAGTGTTTTTCATGGACCTGATGCTC 1485
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TTTCTAGCAGCAGTGGCATGCGCCCTCATCCCTCTAGAGACCAAGGGCCGGCAAATCCAG 1545
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TGAGGCAGTGATGCTTTCTTCAGTTTGATGTACAGAATCACATTACATTTTGGTCAATTG 1605
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      GAGACTAGGGCATTCTTTCTTATCCAGCACATATTTACACCTGCCAAAATTCACTGACAT 1665
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TTTGGATTCAACAAAGATGTGTTCACCTTTCATGTGCAATTGCAGTGTTGCAACAACTGA 1725
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AATGCACCAGCTAGCTCTCAATTCCATACAAGGGTGAAGACTGAAAAAGGTAGCAGCAAC 1785
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      AACTGTATTAAATTTTGAAACTCATGAAAGGGTTGGATTAAATTTTGGATTAAAGTGGCA 1845
consensus_10925#1      ------------------------------------------------------------
consensus_10925#2      ------------------------------------------------------------
                                                                                   

consensus_10925#0      TGCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1885
consensus_10925#1      ----------------------------------------
consensus_10925#2      ----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)