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Oryza sativa
cluster # 10939 cluster # 10939       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10939#0 length = 2957 sequences # 5  
consensus_10939#1 length = 687 sequences # 1  
consensus_10939#2 length = 431 sequences # 1  
consensus_10939#3 length = 326 sequences # 1  

consensusID : consensus_10939#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2957
fasta sequence
                              [AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTTCCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTCCGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCGCGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCCCTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTTGTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAAGGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAGTTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATCATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTATTTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGTGCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTCCTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTT-GGCATCTAATGAATGACTCCCATGTTGATTT-GATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCC-TGGT-AGTGCTGC-TGACATTA-CCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAG-TTTGAGGACTTCGGTGACG-AAGATGAGACCCCTCTGCTTGGAAACCTTAAA-TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACT-CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT-CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGTGGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA]

[+] EMBL AK069300             [AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTTCCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTCCGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCGCGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCCCTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCCCTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCATTTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTTGTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAATACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATTTGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCAATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACAGCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTTCTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGGGGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTCTCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTTCATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAAGGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAGTTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATCATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTATTTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGTGCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTCCTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCACATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAAAGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGACTAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTTCTGTTCGTTCTTCACCGAGCACTT GGCATCTAATGAATGACTCCCATGTTGATTT GATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTGAAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACATCTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAAAAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCC TGGT AGTGCTGC TGACATTA CCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAG TTTGAGGACTTCGGTGACG AAGATGAGACCCCTCTGCTTGGAAACCTTAAA TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACT CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAG                                                                  ]
[+] EMBL AU056091             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCGGAGACATATGAGCCCTTCTTGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTACCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAAAAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATTTAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACCCACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAATATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTNCTGTTCGTTCTTCACCGAGCACTTGGGCATCTAATGAATGACTCCCATGTTGATTTGGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGANAATACGAGTGGTGCAT TCCCGTTTCAGTATTGGAGANTATAGATGTGGATTNTCCAACAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AU082892             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GTCCNTGGTAAGTGCTNCTTGACATTACCCAATTTGGACAGACCCTCAACTCTTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTTGAGGACTTCGGTGACGAAAGATGAGACCCCTCTGCTTGGAACCCTTAAA TTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATNCCGTCCACT CGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACT CAATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGTGGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA]
[+] EMBL AU056092             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gtcnTGC TGACATTA CCAATTTGGACAGCCCCTCAACTCCTTCGCCAAAACGCAAGCGTTTCTTCTCTGATGATAATGAGTTTAATGNGTTTGAG TTTGAGGACTTCGGTGACG AAGATGAGACCCCTCTGCTTGGAAACCTTAAATTTCACATCAAAAGCTAAGAAGGCTAAGGTTGAATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAAGGAGTATGCCGTCCACTCCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCCAATGCAGAGCNGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAGGGANGNGNNTAAAAAa                                                  ]
[+] EMBL CF298016             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATTTGTTTGT ATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAACAGTGGCAAAaa                                                                 ]


>consensus_10939#0 AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTT CCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTC CGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCG CGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCC CTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCC CTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCAT TTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTT GTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAAT ACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATT TGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCA ATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACA GCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTT CTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGG GGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTC TCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTT CATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAA GGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAG TTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATC ATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTAT TTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGT GCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTC CTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCAC ATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAA AGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGAC TAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCT TGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTA CCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAA AAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATT TAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACC CACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAAT ATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTT CTGTTCGTTCTTCACCGAGCACTTGGCATCTAATGAATGACTCCCATGTTGATTTGATTA GTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAAT TTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTG GTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTG AAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACAT CTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAA AAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCCTG GTAGTGCTGCTGACATTACCAATTTGGACAGACCCTCAACTCCTTCGCCAAAACGCAAGC GTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTGAGGACTTCGGTGACGAAG ATGAGACCCCTCTGCTTGGAAACCTTAAATTCACATCAAAAGCTAAGAAGGCTAAGGTTG AATCAGCATCTAAATCGACGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTAGTAA GGAGTATGCCGTCCACTCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCAATGCAG AGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCC CGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTAC ATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACAAATTTTATCTGCTTGTC ATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTCTGATGT GGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCCACTTCATTTGTGAAAAA CAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGTGGGCCGGTGCCGTTCTTC TTCAAAAAAAAAAAAAA



consensusID : consensus_10939#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 687
fasta sequence
                              [AAAGCGCGATTTGAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAAAAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTGGTGGGTTTTAGGGGTCCTGGTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAGGGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTTGAATTAGCATCTAAATTGACGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTAGTAAGGAGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCAATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACAAATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA760799             [AAAGCGCGATTTGAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAAAAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTGGTGGGTTTTAGGGGTCCTGGTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAGGGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTTGAATTAGCATCTAAATTGACGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTAGTAAGGAGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCAATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACAAATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA]


>consensus_10939#1 AAAGCGCGATTTGAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCA AGGGGCGCCTAAAAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTGGTGGGTTT TAGGGGTCCTGGTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGG CAAACGCCCAGGGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACT TGGGTGGCCAAGATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGA AGGCTAAGGTTGAATTAGCATCTAAATTGACGAAGGGCCCCTGGATAGATAAGAACGTAA CCCGGTTAGTAAGGAGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCC AACTCAATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAA AGCTTGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTT TTCCAGCTGTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACAAATTT TATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTTTTGCT GCCTTTTGAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10939#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 431
fasta sequence
                              [TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCCACATCCTCTGGTGAGGAACCCACAGTTCTGGTGATAATTAGGAGAAGATGAACTAGTCAATGCAAACATCTTCCCTNNGGGGCCACTAAGGGATGCCCCTTTAT]

[+] EMBL C28329               [TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCCACATCCTCTGGTGAGGAACCCACAGTTCTGGTGATAATTAGGAGAAGATGAACTAGTCAATGCAAACATCTTCCCTNNGGGGCCACTAAGGGATGCCCCTTTAT]


>consensus_10939#2 TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCCANGTAGTTATATATA TTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTTATCATGGCATGAATC ATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAGTGAGGCAAGCGCGCTGAAC CAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCAGTGGTTTTCAAGTTTG CTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGCATCTCCCGTTTCAGTA TTGGAGAATATAGATGTGGATTGTCCCACATCCTCTGGTGAGGAACCCACAGTTCTGGTG ATAATTAGGAGAAGATGAACTAGTCAATGCAAACATCTTCCCTNNGGGGCCACTAAGGGA TGCCCCTTTAT



consensusID : consensus_10939#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 326
fasta sequence
                              [AGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCTAATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTTTTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCCATATTCATTTGTGAAAAACAGTGGCAATGTGGAACCCAAAAAACCCTGTCATGCCGTCACGTAGCGTAT]

[-] EMBL CF298015             [AGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCTAATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTTTTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCCATATTCATTTGTGAAAAACAGTGGCAATGTGGAACCCAAAAAACCCTGTCATGCCGTCACGTAGCGTAT]


>consensus_10939#3 AGTCACCCTCTTGGCAAAAAGAAGCTCGGCATCCCGGTTCCAATCAAATGGTAGCATGGT CCGAGTGCCGAAGCCTTTTTTTTTCCAGCTGTACATGTTAGTTTAGCATGCATTTTGTTT TATATCCAGATCCCCCTAATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGT GATAGTGAGGTACATTTTTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAA CATGCACTAGGAGTCCCATATTCATTTGTGAAAAACAGTGGCAATGTGGAACCCAAAAAA CCCTGTCATGCCGTCACGTAGCGTAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      AATATTTCCGCCCCCTCCTCACCTCCCAAATCTTCCTTTCCCTCCTTCCTCCTCCTCCTT 60
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CCCACCCAACGATTTGCCCTACTTTTTTTGCTTTCCCCCGCCGCTGCTGCGATTAGTCTC 120
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CGATCTCAACCAATCGACCAACCAAAGCCTTCCCCTCTCCATCGATTCAGCAGCCGCGCG 180
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CGAGCACGCACCAAACCGCCACCTACCGCCCCTCCCCGCGAGCGAAAACCCTAGCGCGCC 240
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTCGCCCTCGCATGGCGGACCAGAACGGCGCCGCGGCCGTGAGCGAAGCGGAGGCCGCCC 300
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTGTTCAGGTTGAAACTGGTGCTGAAAGTGGGGATGCTGAAAGTGAGCAGTACCAACCAT 360
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TTTTCTCCATGTGCCAGCCGATTCGCTCTGTTAGCTATTCAAATTCCTGGGATATGGTTT 420
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GTGCCCCCACAATTAAGAGTAACGAACACAATAGCAACTTGGATTCGATGGATGATAAAT 480
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      ACATGCTGAGTGCACCTTGGCCTGAAAATGAGCAGCCCCAGTCTGAGAATGACATGGATT 540
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TGTTAGATGGGGATACAAATATGCAGTCTGAACCCCTCAGCACAGAGCAGCCTAGCTCCA 600
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      ATGATGAAATAGATATCTGGGATGGGAAAACTAAGCAAGACTCATCATCCCTTCTTGACA 660
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GCAAGCTGTGCAACTCCGGCAGCGGCGCTGAACCTTGCAACATGGAGGGCCAACAATTTT 720
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTTTGTCCTTTTCCCGCAACACTCAATCTCAATTGGTGGGATCTGGTCTTGGCAATATGG 780
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GGAACACATGCTTCCTAAACTCAATTCTTCAGCGTGTCACCCATACAGTCCCACTTTTTC 840
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TCAGGCTTCGTTCCACTGATCACTGTGCTCCATGCTCATATGATAAAGATGGTTTCTGTT 900
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CATTCTGTGCTCTTAAAGAACATATTGATGAATCAATCCGAAGGTCTGGATCTGTTATAA 960
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GGCCAGTGAGGTTCAGAGATAATTTAAGGAGTATCCTTTGCTCTCGATTTTTCCTTGCAG 1020
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TTTAATTTTACCACATTTGTGCACACATGCTCAGTAATATGACTTGCATTTTTGACAATC 1080
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      ATTGGGTGTTTATGCCTGAAAATTTCAAGGTTACCCCTTATATGATTTCATAACTTCTAT 1140
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TTATATGCTTCCTCAGTTCTGTTTCAATTTCAATACATCTTAATATTCACTGAATATTGT 1200
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GCTGAGATATATATCTTCTATTGTATCTGTCTCTGGTACTTCAAATTAGTGGTGGAGTTC 1260
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTTGACAAGATTACCCAGAATTATCATCAGATTTTAGACCAGGACAACAGGAGGATGCAC 1320
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      ATGAGTTCCTACGTTGTTTGCTGGACAACCTGGATAAGTGCACCACTGATCCCAAGCCAA 1380
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      AGGATAAGCCCTCATCTTTTGATGAAGAAAGTATTGTTAAGCAGGTTTTTGGAGGCCGAC 1440
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TAAAAAGCAAGTTGACTTGCTGTGAGTGTGGACACTGCTCGGAGACATATGAGCCCTTCT 1500
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TGGATCTTAGCCTGGAGATTGATCAGGCTGATAACCTTATTGATGCCTTGGAATCTTTTA 1560
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CCAAGTTGGAGCGAATTGGGGATGCTGAGGACAAGCTGAACTGTGAACATTGTAATGCAA 1620
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      AAGTTTGTAAGAACAAGCAACTTATGCTTGATAGATCACCAGATGTCGTTGCCATTCATT 1680
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TAAAGCGTTTCACCAGCCTTGATAGATCTGTTGAAAAGATTGACAAACATGTGGTGTACC 1740
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CACTAGAACTTGATTTGAAGCCATTCCATTGTGATCCTGACATCAATAAGGAGCTGAAAT 1800
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      ATGATCTTTATGGCGTTGTTGAGCATTCTGGTTCACCTAGCTATGGCCATTATGTTTGTT 1860
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTGTTCGTTCTTCACCGAGCACTTGGCATCTAATGAATGACTCCCATGTTGATTTGATTA 1920
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GTGAGGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAAT 1980
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      TTCAGTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTG 2040
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GTGCATCTCCCGTTTCAGTATTGGAGAATATAGATGTGGATTGTCCAACATCCTCTGGTG 2100
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      ------------------------------------------------AAAGCGCGATTT 12
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      AAGCAACCAACAGTTCTGGTGATAAATTAGAGAAAGATGAAACTAGTCAATGCAAAACAT 2160
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      GAGGCCAGAGTCCGAGGCAAAGGCCCGCCCCAATTCTTCTATTCCCCAAGGGGCGCCTAA 72
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CTTTCCTTGAGGAGCCAGCTAAGGGATGCCCGATTGATGGTATCAACAAGGCTGACCTAA 2220
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      AAGAGGAAATCGGGCCGTGCAAATCATTTCGTCGCGAGTG-GTGGGTTTTAGGGGTCCTG 131
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      AAGATGAAATCGTGCCATGCATATCATCTCATCACGATTGTGTGGCTAATAGGTGTCCTG 2280
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      GTAGAGCGGGCGACCTTACCAGTTTGGGCAAGGCCCTCAAGTCGTTTGGCAAACGCCCAG 191
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GTAGTGCTGCTGACATTACCAATTTGGACA-GACCCTCAACTCCTTCGCCAAAACGCAAG 2339
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      GGGTTTTTCTCTGATGATAATGAGTTTAATGTGTCTGAGTTTGAGGACTTGGGTGGCCAA 251
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      CGTTTCTTCTCTGATGATAATGAGTTTAATGTGTTTGAGTTTGAGGACTTCGGTGACGAA 2399
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      GATGAGACCCCTCTGCTTGGAAACCTTAAATTCCCATCAAAAGCTTAGAAGGCTAAGGTT 311
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GATGAGACCCCTCTGCTTGGAAACCTTAAATTCACATCAAAAGCTAAGAAGGCTAAGGTT 2459
consensus_10939#2      ---------------TGCTATTACTTTTTTTTAAATTAAAAATACTACCAGGGCTTTGCC 45
                                                                                   

consensus_10939#1      GAATTAGCATCTAAATTGA---CGAAGGGCCCCTGGATAGATAAGAACGTAACCCGGTTA 368
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GAATCAGCATCTAAATCGA---CGAAGGGCCCTTGCATAGATAAGAACGTAACACGATTA 2516
consensus_10939#2      ANGTAGTTATATATATTAAGAGCAGGATGTGTACAGATACTTGCTATTGCTTTTAGGTTT 105
                                                                                   

consensus_10939#1      GTAAGG--AGTATTCCGTCCCCTTGGAGAAAAGGCATTGTGGGATGCTTGAGCCAACTCA 426
consensus_10939#3      ------------------------------------------------------------
consensus_10939#0      GTAAGG--AGTATGCCGTCCACTCGGAGAAAAGGCATTGTGGACTGCTTGAGCCAACTCA 2574
consensus_10939#2      ATCATGGCATGAATCATTAACCTCTGCAAACCTTTGTTGTAGGTTGATTTGATTAG-TGA 164
                                                                                   

consensus_10939#1      ATGCAAAGCAGGATTTTGGAAGCTGTCCTTGGAGTCACCCTTTTGGCAAAAAAAAGCTTG 486
consensus_10939#3      --------------------------------AGTCACCCTCTTGGCAAAAAGAAGCTCG 28
consensus_10939#0      ATGCAGAGCAGGATTCTGGAAGCTGTCCTCGGAGTCACCCTCTTGGCAAAAAGAAGCTCG 2634
consensus_10939#2      GGCAAGCGCGCTGAACCAGGAAGGGTATATTCTGTTTTATATTAGGCAGGGCAAATTTCA 224
                                                        **       * ****     **  *  

consensus_10939#1      GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 538
consensus_10939#3      GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 80
consensus_10939#0      GCA--TCCCGGTTCCAATCAAATGGTAGCATGGTCCGAGTGCCGAAGCCTT------TTT 2686
consensus_10939#2      GTGGTTTTCAAGTTTGCTGGAGCAAAAGGATGACCTGCATCCTGAAAATACGAGTGGTGC 284
                       *    *  *   *    *  *     ** ***  * *  * * ***           *  

consensus_10939#1      TTTTCCAGCT---GTACATGTTAGTTTAGCATGCCTTTTGTTTTATATCCAGAACCCACA 595
consensus_10939#3      TTTTCCAGCT---GTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGATCCCCCT 137
consensus_10939#0      TTTTCCAGCT---GTACATGTTAGTTTAGCATGCATTTTGTTTTATATCCAGAACCAACA 2743
consensus_10939#2      ATCTCCCGTTTCAGTATTGGAGAATATAG-ATGTGGATTGTCCCACATCCTCTGGTGAGG 343
                        * *** * *   ***   *  * * *** ***    ****   * ****          

consensus_10939#1      AATTTTATTTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTT 655
consensus_10939#3      AATTTTATCTGCTTGTCATACCCTGTATGACCGGTTATATGGTGATAGTGAGGTACATTT 197
consensus_10939#0      AATTTTATCTGCTTGTCATAACCTGTATGACCGGCTAGATGGTGATAGTGAGGTACATTT 2803
consensus_10939#2      AACCCACAGTTCTGGTGATAATTAGGAGAA--GATGAACTAGTCAATGCAAACATCTTCC 401
                       **       * ** ** ***    * *  *  *   *  * ** *  *  *    * *  

consensus_10939#1      TTGCTGCCTTTTGAAAAAAAAAAAAAAAAAAA---------------------------- 687
consensus_10939#3      TTGGTGCCTTCTGATGTGAAATGCCTCACCTATATGTATGGAACATGCACTAGGAGTCCC 257
consensus_10939#0      TTGCTGCCTTCTGATGTGGAATGCCTCACCTATATGTATGGAACATGCACTCGGAGTCCC 2863
consensus_10939#2      CTNNGGGGCCACTAAGGGATGCCCCTTTAT------------------------------ 431
                        *   *       *                                              

consensus_10939#1      ------------------------------------------------------------
consensus_10939#3      ATATTCATTTGTGAAAAACAGTGGCAATGTGGA-ACCCAAAAAACCCTGTCATGCCGTCA 316
consensus_10939#0      AC-TTCATTTGTGAAAAACAGTGGCAAAGGGAAGAGACTAAAAACTGAGGAGTTTTGTGT 2922
consensus_10939#2      ------------------------------------------------------------
                                                                                   

consensus_10939#1      -----------------------------------
consensus_10939#3      CGTAGCGTAT------------------------- 326
consensus_10939#0      GGGCCGGTGCCGTTCTTCTTCAAAAAAAAAAAAAA 2957
consensus_10939#2      -----------------------------------
                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)