Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 10943 cluster # 10943       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10943#0 length = 857 sequences # 2  
consensus_10943#1 length = 696 sequences # 4  
consensus_10943#2 length = 610 sequences # 1  
consensus_10943#3 length = 538 sequences # 1  

consensusID : consensus_10943#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 857
fasta sequence
                              [CACGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCCAGTGATTGAAATCATATTCCCTGGGTAAGAAAAGCGTTTTTATTTATTCCACCACCCACTTCCTTTTTCCCAGGTTCTGGCCAATAAAATCTTTGGTGGCATTTGAATGGTCCCCAAAATGTTAACTTCAAGCCAAAATTTGGACCGGAGAACCAGGAACCCAAGTTGGTTTTGGC]

[+] EMBL CA755863             [CACGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCCAGTGATTGAAATCATATTCCCTGGGTAAGAAAAGCGTTTTTATTTATTCCACCACCCACTTCCTTTTTCCCAGGTTCTGGCCAATAAAATCTTTGGTGGCATTTGAATGGTCCCCAAAATGTTAACTTCAAGCCAAAATTTGGACCGGAGAACCAGGAACCCAAGTTGGTTTTGGC]
[+] EMBL CF320034             [  CGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAAATTTT                                                                                                                                                                                                                                                                                                                                  ]


>consensus_10943#0 CACGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAA CCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCT CGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCC TCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCT CAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAAT TATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGA CAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGA GGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAA GGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACT TGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCA GGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAA TGTCATGGCTCTTTCAAAGCCAGTGATTGAAATCATATTCCCTGGGTAAGAAAAGCGTTT TTATTTATTCCACCACCCACTTCCTTTTTCCCAGGTTCTGGCCAATAAAATCTTTGGTGG CATTTGAATGGTCCCCAAAATGTTAACTTCAAGCCAAAATTTGGACCGGAGAACCAGGAA CCCAAGTTGGTTTTGGC



consensusID : consensus_10943#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 696
fasta sequence
                              [CGTTGTGGCGCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCGGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATT-TTTGAACTTGAT-GG-AGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTA-CCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGC-AATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTATCTGACAATCTCACGAGTCTCTAGCTAAAAAAAAAAAAAAAA]

[+] EMBL AK059677             [CGTTGTGGCGCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCGGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATT TTTGAACTTGAT GG AGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTA CCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGC AATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTT                                                     ]
[-] EMBL CF320033             [                                                                                                                                                                                                                                                                            AAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATT TTTGAACTTGAT GG AGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTA CCCCGGGTCACTCAATTTCAATGTCAAGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGC AATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTATCTGACAATCTCACGAGTCTCTAGCTAAAAAAAAAAAAAAAA]
[+] EMBL AU070356             [                                                                                                                                                                                                                                                                                                                                                                          cGATGATGAAATTNTTTGAACTTGATCGGTAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTA CCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGC AATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTATCTGACAATCTCAaaaaaa                       ]
[+] EMBL BI810412             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTGCGCAGTAGCCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATG AATCATATCCTGGTAG AAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGCAAATAATCTTGTGCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTATCTGACAAaaa                               ]


>consensus_10943#1 CGTTGTGGCGCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGT CTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTT GCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAG CAAGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCC CGGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTT TCTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGT GTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCT TCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAG TACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATC CTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGCAATAATCTTGTTCAT GATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTATCTGAC AATCTCACGAGTCTCTAGCTAAAAAAAAAAAAAAAA



consensusID : consensus_10943#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 610
fasta sequence
                              [TGCGCCTCCACCGCGCTTTTCTCTTTTTTTGCGCGATTTTTCCCCTCCTCCGGCACGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCTGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGTCATTATAGCCACACCTTTCTTCATTTATGCCTTGTTGATTAATAAACTCATTAGAGAACACAGTAATATTATGTTTAATG]

[+] EMBL CF276103             [TGCGCCTCCACCGCGCTTTTCTCTTTTTTTGCGCGATTTTTCCCCTCCTCCGGCACGTCCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCTGGGTTCTGCGACGTCTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCATGCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGTCATTATAGCCACACCTTTCTTCATTTATGCCTTGTTGATTAATAAACTCATTAGAGAACACAGTAATATTATGTTTAATG]


>consensus_10943#2 TGCGCCTCCACCGCGCTTTTCTCTTTTTTTGCGCGATTTTTCCCCTCCTCCGGCACGTCC GCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGTTT ATGCGGGGATTAGGGGTTCCCGCGGAGGCTGGGTTCTGCGACGTCTACGGTCTCGACGAC GAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGGAT CGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCAAG AATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGAATTATCCAT GCAATAGGGAATGCTTTATCCAGAATCAAGCTTGTTGAGGGGTCATATTTTGACAGATTT TACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTTTCTTGAGGAGGATGAA GAAATGGAAAAGGCTCATTCTGTTGCTGTTTCTGCTGGCGATACAGAGGTCATTATAGCC ACACCTTTCTTCATTTATGCCTTGTTGATTAATAAACTCATTAGAGAACACAGTAATATT ATGTTTAATG



consensusID : consensus_10943#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 538
fasta sequence
                              [GCTACCTTTAGCGGTGGATTATACTGATCATGTGTCTTTTGTAGGTGGTTTGTTGACATGTTATGCATTCTTTCAAAATTTTAGTTGGGATGGCTCATGGCTGTTAAGTGTTGTGGAAGATCTACTTCTATGTCCTTGGCCCAGATTTAGTTCTGTTTTTGGGTTCTTTTCTCACACCTCCCTAATACTTTGTGCAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGCAATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTAAAAAA]

[-] EMBL CF276102             [GCTACCTTTAGCGGTGGATTATACTGATCATGTGTCTTTTGTAGGTGGTTTGTTGACATGTTATGCATTCTTTCAAAATTTTAGTTGGGATGGCTCATGGCTGTTAAGTGTTGTGGAAGATCTACTTCTATGTCCTTGGCCCAGATTTAGTTCTGTTTTTGGGTTCTTTTCTCACACCTCCCTAATACTTTGTGCAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGCAATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTAAAAAA]


>consensus_10943#3 GCTACCTTTAGCGGTGGATTATACTGATCATGTGTCTTTTGTAGGTGGTTTGTTGACATG TTATGCATTCTTTCAAAATTTTAGTTGGGATGGCTCATGGCTGTTAAGTGTTGTGGAAGA TCTACTTCTATGTCCTTGGCCCAGATTTAGTTCTGTTTTTGGGTTCTTTTCTCACACCTC CCTAATACTTTGTGCAGGCCAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTG TTGATGATGAAATTTTTGAACTTGATGGAGGGAATTCGCAGCCAATCTCCCATGGCCCTT CCTCTCCTGATAGCTTGTTGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGT ACCCCGGGTCACTCAATTTCAATGTCATGGCTCTTTCAAAGCAGTGATGAAATCATATCC TGGTAGAAAGGTTTTATTATTCACACCACTCTTTTCCAGTCTGCAATAATCTTGTTCATG ATGTCCAAATGTACTCAGCAATTGACGAGACAGAACAGTGTTTGCATCTACTAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10943#1      CGTTGTGGCGCAGTTTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGT 60
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      ------------------------------------------------------------
consensus_10943#2      ------------------------------------------------------------
                                                                                   

consensus_10943#1      CTACGGTCTCGACGACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTT 120
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      -------------------------------------------------------CACGT 5
consensus_10943#2      --TGCGCCTCCACCGCGCTTTTCTCTTTTTTTGCGCGATTTTTCCCCTCCTCCGGCACGT 58
                                                                                   

consensus_10943#1      GCTTTATCCTCAGGAT-CGGAAGAAGGAATC----CGTTGCTTCACCCTCCTCCAC-GGT 174
consensus_10943#3      --GCTACCTTTAG----CGGTGGATTATACT----GATCATGTGTCTTTTGTAGGT-GGT 49
consensus_10943#0      CCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGT 65
consensus_10943#2      CCGCCGCCATGGGCAAGCGCTGGCTCCCCCTCGAGGCCAACCCGGAGGTCATGAACCAGT 118
                              * *  *    **   *                         *  *      **

consensus_10943#1      C-GAGAGCAAGTTGAGGGGTCATATTTTGACAGATTT--TACA-AACAAACAGCTGATAT 230
consensus_10943#3      TTGTTGACATGTTATGCATTCTTTCAAAATTTTAGTT--GGGATGGCTCATGGCTGTTAA 107
consensus_10943#0      TTATGCGGGGATTAGGGGTTCCCGCGGAGGCGGGGTTCTGCGACGTCTACGGTCTCGACG 125
consensus_10943#2      TTATGCGGGGATTAGGGGTTCCCGCGGAGGCTGGGTTCTGCGACGTCTACGGTCTCGACG 178
                                  **  *   **              **     *   *      **     

consensus_10943#1      GGATCCTGCCCGGCGTGCTTCGTT--TCT----TGAGGAGGATGAAGAAATGGAAAAGGC 284
consensus_10943#3      GTGTTGTGGAAGATCTACTTCTATGTCCT----TGGCCCAGATTTAGTTCTGTTTTTGGG 163
consensus_10943#0      ACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGG 185
consensus_10943#2      ACGAGATGCTCGCCATGGTGCCACAGCCCGTGCTCGCCGTCATCTTGCTTTATCCTCAGG 238
                             **   *   *  * *      *     *       **   *   *       * 

consensus_10943#1      TCATTCTGTTGCTGTTT----CTGCTGGCGATACAGAGGCCAAGGATGGAGTAATCGAAC 340
consensus_10943#3      TTCTTTTCTCACACCTC----CCTAATACTTTGTGCAGGCCAAGGATGGAGTAATCGAAC 219
consensus_10943#0      ATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCA 245
consensus_10943#2      ATCGGAAGAAGGAATCCGTTGCTTCACCCTCCTCCACGGTCGAGAGCAAGAAGCTCAGCA 298
                                            *      *        ** * **          **    

consensus_10943#1      ATTATGTCTGTTTCTCC---TGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATT 397
consensus_10943#3      ATTATGTCTGTTTCTCC---TGTGTTGATGATGAAATTTTTGAACTTGATGGAGGGAATT 276
consensus_10943#0      AGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGA---ATTA 302
consensus_10943#2      AGAATGTATACTTTACAAAACAGACTATTGGTAATGCCTGTGGAACAGTTGGA---ATTA 355
                       *  **** *  **  *         *  ** * *    * ** *   * ****   * * 

consensus_10943#1      CGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGG---ACGCTGCAA 454
consensus_10943#3      CGCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGTTGCAGG---ACGCTGCAA 333
consensus_10943#0      TCCATGCAATAGGGAATGCTTTATCCAGAATCAA--GCTTGTTGAGGGGTCATATTTTGA 360
consensus_10943#2      TCCATGCAATAGGGAATGCTTTATCCAGAATCAA--GCTTGTTGAGGGGTCATATTTTGA 413
                         **  ****     ***     ***       *  ********  **   *   *   *

consensus_10943#1      AAGTCATCA-AAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCT 513
consensus_10943#3      AAGTCATCA-AAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATTTCAATGTCATGGCT 392
consensus_10943#0      CAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTT-TCTTGAGG 419
consensus_10943#2      CAGATTTTACAAACAAACAGCTGATATGGATCCTGCCCAGCGTGCTTCGTT-TCTTGAGG 472
                        **   * * ** * *  *      *     ** *  **      ***  * ** **   

consensus_10943#1      CTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCT 573
consensus_10943#3      CTTTCAAAGCAGTGATGAAATCATATCCTGGTAGAAAGGTTTTATTATTCACACCACTCT 452
consensus_10943#0      AGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCT--GTTTCTGCTGGCGATACAGAGGC 477
consensus_10943#2      AGGATGAAGAAATGGAAAAGGCTCATTCTGTTGCT--GTTTCTGCTGGCGATACAGAGGT 530
                             *** * **   **  *  ** *** *     * ** *  *    * **      

consensus_10943#1      TTTC-------CAGTC-TGCAATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTG 625
consensus_10943#3      TTTC-------CAGTC-TGCAATAATCTTGTTCATGATGTCCAAATGTACTCAGCAATTG 504
consensus_10943#0      CAAGGATGGAGTAATCGAACATTATGTCTGTTTCTCCTGTGTTGATGATGAAATTTTTGA 537
consensus_10943#2      CATT------ATAGCCACACCTT-TCTTCATTTATGCCTTGTTGATTAATAAACTCATTA 583
                                   *  *   *  *       **  *    *    **      *    *  

consensus_10943#1      ACGAGACAGAACAGTGTTTGCATCTACTATCTGACAATCTCACGAGTCTCTAGCTAAAAA 685
consensus_10943#3      ACGAGACAGAACAGTGTTTGCATCTACTAAAAAA-------------------------- 538
consensus_10943#0      ACTTGATGGAGGGAATTC-GCAGCCAATCTCCCATGGCCCTTCCTCTCCTGATAGCTTGT 596
consensus_10943#2      GAG-AACACAGTAATATT-ATGTTTAATG------------------------------- 610
                            *   *      *        * *                                

consensus_10943#1      AAAAAAAAAAA------------------------------------------------- 696
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      TGCAGGACGCTGCAAAAGTCATCAAAGCTAGGATTGCGCAGTACCCCGGGTCACTCAATT 656
consensus_10943#2      ------------------------------------------------------------
                                                                                   

consensus_10943#1      ------------------------------------------------------------
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      TCAATGTCATGGCTCTTTCAAAGCCAGTGATTGAAATCATATTCCCTGGGTAAGAAAAGC 716
consensus_10943#2      ------------------------------------------------------------
                                                                                   

consensus_10943#1      ------------------------------------------------------------
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      GTTTTTATTTATTCCACCACCCACTTCCTTTTTCCCAGGTTCTGGCCAATAAAATCTTTG 776
consensus_10943#2      ------------------------------------------------------------
                                                                                   

consensus_10943#1      ------------------------------------------------------------
consensus_10943#3      ------------------------------------------------------------
consensus_10943#0      GTGGCATTTGAATGGTCCCCAAAATGTTAACTTCAAGCCAAAATTTGGACCGGAGAACCA 836
consensus_10943#2      ------------------------------------------------------------
                                                                                   

consensus_10943#1      ---------------------
consensus_10943#3      ---------------------
consensus_10943#0      GGAACCCAAGTTGGTTTTGGC 857
consensus_10943#2      ---------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)