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Oryza sativa
cluster # 10958 cluster # 10958       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10958#0 length = 2240 sequences # 7  
consensus_10958#1 length = 796 sequences # 1  

consensusID : consensus_10958#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 2240
fasta sequence
                              [TTCTTCCGTTTACTCGTCGCGGTCGCAGGGGCGGGGCAGCGTTGCCGCGTTCGATATAAACCCTCCCCGGCAGATTCGCGATCGGTTTCCGACTCCTCTCTCGCGCCGAGCCCGAGCTAAGCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGTGTGGATCTCGCGGCGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGACCCGATTCGGTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAATTCGAGCTGAAGAAGAACTGATAGTAGCAAGAGGTGTCCCCCCTCAATTCTAGCTCTGAATTGCAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCGTTCACAGTGAAGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTTGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTCATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGGTCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAGTCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCCATGGTTGATGCAGAGAGAAGGTTGTTGGCAAATGCACTGGAAGACGTTGACAATCAGCATTTTGTGTTACTCTCTGACAGCTGTGTACCTTTGCACAATTTTGATTATGTGTATAACTACCTGATAGGAACAAATATCAGTTTTATTGATTCGTAAGTCAGTTTCTTTTCCAATTATTTTGAGGATTTATCTCAACTTCCGTTTATGTATTCACATGTTAACTCTTACACTGACTTAAACATGGGATGACATTGTAAGCAAAGTTTCTTATATTCCATTTTCATATATACTGTCAGTGACGAGTAACTTTATAGTCATTATTAATACTGCTTACGCTCTCCTTTATTTCCTTGGTCAGCTTTTATGATCCTGGACCACATGGAAATTTTAGATATTCTAAACATATGTTACCTGAAGTTAGAGAGAGTGACTTCAGGAAGGGTTCACAGTGGTTCTCAGTCAAGCGTCAGCATGCATTGATGATAATTGCGGACAGTCTTTACTATACTAAGTTCAAGCTTCATTGTAAGCCTGGGATGGAAGATGGTCGCAACTGCTATGCTGACGAGCATTATTTGCCAACACTATTCCATATGATAGATCCAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCATCCGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACAGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCTCTTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAAGTCATTATTGAGGCCCATTTTTATTGATTTATCCATAAAGCTTTGGCAAACCTGTGTCTTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK067935             [TTCTTCCGTTTACTCGTCGCGGTCGCAGGGGCGGGGCAGCGTTGCCGCGTTCGATATAAACCCTCCCCGGCAGATTCGCGATCGGTTTCCGACTCCTCTCTCGCGCCGAGCCCGAGCTAAGCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGTGTGGATCTCGCGGCGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGACCCGATTCGGTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAATTCGAGCTGAAGAAGAACTGATAGTAGCAAGAGGTGTCCCCCCTCAATTCTAGCTCTGAATTGCAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCGTTCACAGTGAAGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTTGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTCATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGGTCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAGTCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCCATGGTTGATGCAGAGAGAAGGTTGTTGGCAAATGCACTGGAAGACGTTGACAATCAGCATTTTGTGTTACTCTCTGACAGCTGTGTACCTTTGCACAATTTTGATTATGTGTATAACTACCTGATAGGAACAAATATCAGTTTTATTGATTCGTAAGTCAGTTTCTTTTCCAATTATTTTGAGGATTTATCTCAACTTCCGTTTATGTATTCACATGTTAACTCTTACACTGACTTAAACATGGGATGACATTGTAAGCAAAGTTTCTTATATTCCATTTTCATATATACTGTCAGTGACGAGTAACTTTATAGTCATTATTAATACTGCTTACGCTCTCCTTTATTTCCTTGGTCAGCTTTTATGATCCTGGACCACATGGAAATTTTAGATATTCTAAACATATGTTACCTGAAGTTAGAGAGAGTGACTTCAGGAAGGGTTCACAGTGGTTCTCAGTCAAGCGTCAGCATGCATTGATGATAATTGCGGACAGTCTTTACTATACTAAGTTCAAGCTTCATTGTAAGCCTGGGATGGAAGATGGTCGCAACTGCTATGCTGACGAGCATTATTTGCCAACACTATTCCATATGATAGATCCAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCATCCGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACAGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCCTATTTCTCTTGATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAAGTCATTATTGAGGCCCATTTTTATTGATTTATCCATA                                           ]
[+] EMBL CF306142             [                                                                                                                                                                                                                                                                                                     gGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAATTCGAGCTGAAGAAGAACTGATAGTAGCAAGAGGTGTCCCCCCTCAATTCTAGCTCTGAATTGCAGG ATTGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCCTTCACAGTGATGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTTGTTTTCAGACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTCATG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB634372             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GAGTGACTTCAGGAAGGGTTCACAGTGTTTCTCAGTCAAGCGTCAGCATGCATTGATGATAATTGCGGACAGTCTTTACTATACTAAGTTCAAGCTTCATTGTAAGCCTGGGATGGAAGATGGTCGCAACTGCTATGCTGACGAGCATTATTTGCCAACACTATTCCATATGATAGATCCAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCATCCGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACAGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCTCTTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAAGTCATTATTGAGGCCCATTTTTATTGATTTATCCATAAAGCTTTGGCAAACCTGTGTCT                     ]
[-] EMBL CA763050             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gggTGATAGATCCAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCATCCGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTTTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTTTGTTACAGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCTCTTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAAGTCATTATTGAGGCCCATTTTTATTGATTTATCCATAAAGCTTTGGCAAACCTTTGTTTTAAAAAAAAAAAAAAAAAAAA]
[+] EMBL C73313               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       AAGCTTATCGGGCAAATNATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATA NAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCNAGAAAGTTCTACCCTGANTCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACAGGAATCTTTGTAAATTGGAGGAG ACAGCAGATTTATTAACAATAGCTGGTATAGG ATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGG TCAGATCT CACGGTCAGGCC TTNCCACTCCTGAATAC AANTTCTTTAGG                                                                                                                                                                          ]
[+] EMBL AU094249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        AGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTGACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTATGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAAACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGGGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACAGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATAGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCCTATTTCTCTTGATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAAGTCATTATTGAGGCCCATTTTTATTGATTTATCCAAAAA                                         ]
[+] EMBL AA751407             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCTCTTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTG                                                                                                ]


>consensus_10958#0 TTCTTCCGTTTACTCGTCGCGGTCGCAGGGGCGGGGCAGCGTTGCCGCGTTCGATATAAA CCCTCCCCGGCAGATTCGCGATCGGTTTCCGACTCCTCTCTCGCGCCGAGCCCGAGCTAA GCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGT GTGGATCTCGCGGCGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGACCCGATTCGG TTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCGC GCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAA TTCGAGCTGAAGAAGAACTGATAGTAGCAAGAGGTGTCCCCCCTCAATTCTAGCTCTGAA TTGCAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCGTTCACAGTGAAGATT TAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCT CTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTC TCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGA GATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTT GTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTC ATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGGT CATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAGT CCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCCATG GTTGATGCAGAGAGAAGGTTGTTGGCAAATGCACTGGAAGACGTTGACAATCAGCATTTT GTGTTACTCTCTGACAGCTGTGTACCTTTGCACAATTTTGATTATGTGTATAACTACCTG ATAGGAACAAATATCAGTTTTATTGATTCGTAAGTCAGTTTCTTTTCCAATTATTTTGAG GATTTATCTCAACTTCCGTTTATGTATTCACATGTTAACTCTTACACTGACTTAAACATG GGATGACATTGTAAGCAAAGTTTCTTATATTCCATTTTCATATATACTGTCAGTGACGAG TAACTTTATAGTCATTATTAATACTGCTTACGCTCTCCTTTATTTCCTTGGTCAGCTTTT ATGATCCTGGACCACATGGAAATTTTAGATATTCTAAACATATGTTACCTGAAGTTAGAG AGAGTGACTTCAGGAAGGGTTCACAGTGGTTCTCAGTCAAGCGTCAGCATGCATTGATGA TAATTGCGGACAGTCTTTACTATACTAAGTTCAAGCTTCATTGTAAGCCTGGGATGGAAG ATGGTCGCAACTGCTATGCTGACGAGCATTATTTGCCAACACTATTCCATATGATAGATC CAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCATC CGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATTG ACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTAT GGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATAA ACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATGG GTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTACA GGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAATA GGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCCA TTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCTC TTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGAA GTCATTATTGAGGCCCATTTTTATTGATTTATCCATAAAGCTTTGGCAAACCTGTGTCTT AAAAAAAAAAAAAAAAAAAA



consensusID : consensus_10958#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 796
fasta sequence
                              [AGCCCCATCTAAGCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGTGTGGATCTCGCGGCAGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGATCCGATTCGGTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAATTCGAGCTGAAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCCTTCACAGTGAAGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTTGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTCATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGGTCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAGTCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCC]

[+] EMBL CB634371             [AGCCCCATCTAAGCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGTGTGGATCTCGCGGCAGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGATCCGATTCGGTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGAATTCGAGCTGAAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCCTTCACAGTGAAGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGTTGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTTCATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGGTCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAGTCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCC]


>consensus_10958#1 AGCCCCATCTAAGCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGG GAAGGGGCTTGTGTGGATCTCGCGGCAGGATTCACCGAGCGATTCGCCTTTTTTTCCGTT TGATCCGATTCGGTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGAT CTCCTCCGCCCGCGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCC ATCTCGGTTCGAATTCGAGCTGAAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCA AGCCTTCACAGTGAAGATTTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAA GGATATGAAGTCTGCTCCTCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCAT ACTTGTTGTAGCTTTCGTCTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCA TTATACGTCTCCTATGAGAGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCA AGAGAGAGCCTCACAAGTTGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAA GAGATCAAAAGTTGCTTTCATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATG GGAGAAATTTTTTGAGGGTCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGA GAAACCAGAACATGCCAGTCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGT ATGGGGTAAGATTTCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10958#0      TTCTTCCGTTTACTCGTCGCGGTCGCAGGGGCGGGGCAGCGTTGCCGCGTTCGATATAAA 60
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      CCCTCCCCGGCAGATTCGCGATCGGTTTCCGACTCCTCTCTCGCGCCGAGCCCGAGCTAA 120
consensus_10958#1      ------------------------------------------------AGCCCCATCTAA 12
                                                                       ***** * ****

consensus_10958#0      GCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGT 180
consensus_10958#1      GCTGCGCGCCATTGTAGCTAGCTTTGATCGGCGTCGGCTTGTTGGGGGGAAGGGGCTTGT 72
                       ************************************************************

consensus_10958#0      GTGGATCTCGCGGC-GGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGACCCGATTCG 239
consensus_10958#1      GTGGATCTCGCGGCAGGATTCACCGAGCGATTCGCCTTTTTTTCCGTTTGATCCGATTCG 132
                       ************** ************************************ ********

consensus_10958#0      GTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCG 299
consensus_10958#1      GTTCGGTTCGATTTCGATTCCCATCCTTTTGGTCGCGGGTTCTGGGATCTCCTCCGCCCG 192
                       ************************************************************

consensus_10958#0      CGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGA 359
consensus_10958#1      CGCGGCGTGCGGCGTCCGATCCTGCGCCGCTGCCCCGGCGGCCCTCCCATCTCGGTTCGA 252
                       ************************************************************

consensus_10958#0      ATTCGAGCTGAAGAAGAACTGATAGTAGCAAGAGGTGTCCCCCCTCAATTCTAGCTCTGA 419
consensus_10958#1      ATTCGAGCTGAAG----------------------------------------------- 265
                       *************                                               

consensus_10958#0      ATTGCAGGAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCGTTCACAGTGAAGAT 479
consensus_10958#1      -------GAAAAGCTGGTAAAATCTTAGGGTAATGGGAGTCAAGCCTTCACAGTGAAGAT 318
                              ************************************** **************

consensus_10958#0      TTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCC 539
consensus_10958#1      TTAATAGATGAAGGCACACCAATTGTGGCAGTTACCTATCAAGGATATGAAGTCTGCTCC 378
                       ************************************************************

consensus_10958#0      TCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGT 599
consensus_10958#1      TCTCCCTCGCGGACGAACTTCTCCGAAAAAACATTTGTGCATACTTGTTGTAGCTTTCGT 438
                       ************************************************************

consensus_10958#0      CTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAG 659
consensus_10958#1      CTCCATTGTAACACTGTGGGCTTATCTCTATCCACCCCAGCATTATACGTCTCCTATGAG 498
                       ************************************************************

consensus_10958#0      AGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGT 719
consensus_10958#1      AGATTGGTTACCTGCAGAGCCTGTCAGGGAATTGACGGATCAAGAGAGAGCCTCACAAGT 558
                       ************************************************************

consensus_10958#0      TGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTT 779
consensus_10958#1      TGTTTTCAAACAGATCCTATCAACACCTCCTGTTAAGTCGAAGAGATCAAAAGTTGCTTT 618
                       ************************************************************

consensus_10958#0      CATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGG 839
consensus_10958#1      CATGTTCTTAACTCCTGGTACATTGCCATTTGAAAGATTATGGGAGAAATTTTTTGAGGG 678
                       ************************************************************

consensus_10958#0      TCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAG 899
consensus_10958#1      TCATGAGGGAAGATATACCATATATGTTCATGCCTCAAGGGAGAAACCAGAACATGCCAG 738
                       ************************************************************

consensus_10958#0      TCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCCAT 959
consensus_10958#1      TCCCTTATTTATTGATCGAGACATACGCAGTGAAAAGGTGGTATGGGGTAAGATTTCC-- 796
                       **********************************************************  

consensus_10958#0      GGTTGATGCAGAGAGAAGGTTGTTGGCAAATGCACTGGAAGACGTTGACAATCAGCATTT 1019
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      TGTGTTACTCTCTGACAGCTGTGTACCTTTGCACAATTTTGATTATGTGTATAACTACCT 1079
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GATAGGAACAAATATCAGTTTTATTGATTCGTAAGTCAGTTTCTTTTCCAATTATTTTGA 1139
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GGATTTATCTCAACTTCCGTTTATGTATTCACATGTTAACTCTTACACTGACTTAAACAT 1199
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GGGATGACATTGTAAGCAAAGTTTCTTATATTCCATTTTCATATATACTGTCAGTGACGA 1259
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GTAACTTTATAGTCATTATTAATACTGCTTACGCTCTCCTTTATTTCCTTGGTCAGCTTT 1319
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      TATGATCCTGGACCACATGGAAATTTTAGATATTCTAAACATATGTTACCTGAAGTTAGA 1379
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GAGAGTGACTTCAGGAAGGGTTCACAGTGGTTCTCAGTCAAGCGTCAGCATGCATTGATG 1439
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      ATAATTGCGGACAGTCTTTACTATACTAAGTTCAAGCTTCATTGTAAGCCTGGGATGGAA 1499
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GATGGTCGCAACTGCTATGCTGACGAGCATTATTTGCCAACACTATTCCATATGATAGAT 1559
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      CCAAATGGAATTGCCAACTGGTCTGTGACTCATGTTGACTGGTCTGAAGGGAAGTGGCAT 1619
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      CCGAAAGCTTATCGGGCAAATGATGTTACATACGAGCTTCTGAAGAATATAACATCAATT 1679
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GACATGAGCTACCATATCACCAGCGATAGCAAGAAAGTGGTTACGCAGAGGCCTTGCTTA 1739
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      TGGAATGGAGTGAAGAGACCGTGTTACTTGTTTGCGAGAAAGTTCTACCCTGAATCCATA 1799
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      AACCGCCTCATGAACTCATTCTCAAATTACACCCGTTTTTGAGTTCTGCAGAGTTGCATG 1859
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      GGTACCCTACACTAAAAAAATTCCTCCATACTAGTGGATATATAGGAGATATTCTGTTAC 1919
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      AGGAATCTTTGTAAATTGGAAGAGAACAGCAGATTTATTAACAATAGCTGGTATAGGAAT 1979
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      AGGGAGAGGAGAAGGCATACGCCGCAGCATTAGGGTGGTTCAGATCTCCACGGTCAGGCC 2039
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      ATTGCCACTCCTGAATACAAATTTCTTTAGGTTCACCTTGTTTTTTGCTAGCTTATTTCT 2099
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      CTTTATTTCTAGCTGCAGATTCTGTCATGTACATGAAGCTTATTGTATAACTAGGGGAGA 2159
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      AGTCATTATTGAGGCCCATTTTTATTGATTTATCCATAAAGCTTTGGCAAACCTGTGTCT 2219
consensus_10958#1      ------------------------------------------------------------
                                                                                   

consensus_10958#0      TAAAAAAAAAAAAAAAAAAAA 2240
consensus_10958#1      ---------------------
                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)