These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10964#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 3259 fasta sequence [CCAAACCGGCCATTTCCGCTTCCCTATTCCGCCCCCCTTCCTCCGCTCCCAACCGAGTCCCCGGCGCCGCCGCCGGCTACATCCTCGCCCTGCGTCGAGGGCCACGGCGCCGCGCCCACCGCCCGTCGCAGCGCCCCCGCTGCTCGGCCACGGCTCGCACGACCGCGCGGGTGAGAGAACAGCCGGCGCTGCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGGCGCACTCCATGGGTGGTTAGATATCATCCATTACATCCTGATATCGTTGCTAGCGGAAGTTTGGATAATGAAGTTTG-TCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCCAATTACTACGGACAGTTTGAGAGGGCTAAGTAAACATCGTCATATGCTGGCCTCTGTACCTGGTGGAGCAGGGACTTCGCTTCAAGGTGCTCAAAATGGTGAAGCTCATGTTAATGTTGTCTCATTAGGTGTTGGGTCAGAATTTGCTACGTCACTGTTTGCTGGTGACGGTACTGAATTACCCTGTACAGTGAAACTTAGAATATGGCGGCATAACATTGACAACCCTTGTGCTGTGTTAGCACCTGAGGCATGCTGCTTGACAATCTCTCATGCTGTTCTTTGCAGTGAAATGGGCACCCATTTTTCCCCCTGTGGGCGTTTTTTGGTGGCTTGTGTTGCATGCTTACTGCCTCAAACAGAAGTTGGTGAGCATGTAAGCCAATCGCCTGTACAGTATGATTCAACTGGGGCTGGAACATCACCAACTCGCCACCCTCTCCCCTCTCGTCGAGTTATTTATGAGCTTCGTGTTTATTCTCTTGAGGAGGAAACGTTTGGGACAGTTCTTGTGTCCCGGGCAATAAGGGCAGCCCATTGCTTAACTTCCATTCAGTTTTCACCTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA-CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA-CTGAGACTCCGGAAAACATTTTGTGACGATCA-TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCC-AAACCA-CATTAGTAAATGCGAGAAAATGGGTATCAAAAA] [+] EMBL AK072913 [CCAAACCGGCCATTTCCGCTTCCCTATTCCGCCCCCCTTCCTCCGCTCCCAACCGAGTCCCCGGCGCCGCCGCCGGCTACATCCTCGCCCTGCGTCGAGGGCCACGGCGCCGCGCCCACCGCCCGTCGCAGCGCCCCCGCTGCTCGGCCACGGCTCGCACGACCGCGCGGGTGAGAGAACAGCCGGCGCTGCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGGCGCACTCCATGGGTGGTTAGATATCATCCATTACATCCTGATATCGTTGCTAGCGGAAGTTTGGATAATGAAGTTTG TCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCCAATTACTACGGACAGTTTGAGAGGGCTAAGTAAACATCGTCATATGCTGGCCTCTGTACCTGGTGGAGCAGGGACTTCGCTTCAAGGTGCTCAAAATGGTGAAGCTCATGTTAATGTTGTCTCATTAGGTGTTGGGTCAGAATTTGCTACGTCACTGTTTGCTGGTGACGGTACTGAATTACCCTGTACAGTGAAACTTAGAATATGGCGGCATAACATTGACAACCCTTGTGCTGTGTTAGCACCTGAGGCATGCTGCTTGACAATCTCTCATGCTGTTCTTTGCAGTGAAATGGGCACCCATTTTTCCCCCTGTGGGCGTTTTTTGGTGGCTTGTGTTGCATGCTTACTGCCTCAAACAGAAGTTGGTGAGCATGTAAGCCAATCGCCTGTACAGTATGATTCAACTGGGGCTGGAACATCACCAACTCGCCACCCTCTCCCCTCTCGTCGAGTTATTTATGAGCTTCGTGTTTATTCTCTTGAGGAGGAAACGTTTGGGACAGTTCTTGTGTCCCGGGCAATAAGGGCAGCCCATTGCTTAACTTCCATTCAGTTTTCACCTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGT ] [+] EMBL CF306884 [ GCCTTGGCCTCGGCTCGGCGGCGCGACGCCCCCACCCACTCCAGGCTCCACGTGAGGAATTTTTAATGCTTGAAATGACTGAAAGTTGGATAGAAGGCTCAAAAAACACTTCAGCTCCAGAATCAGTTTCTTGTTCAGTTTCTAGATATGAATCATCACCGCCAAGAAGACTGGGGAAAAGAAATATTTATCATCTATTAGCTCAACGGGAGATCTCTCCTCGGACAAAACACCAAGCTAAAAATATTTGGTCTGGATCTCCAGAATGTGCTACTGGTTCAATTGAGTTAGCATTTTGGGTTACAGATGCTAGACATGATCTTTTTTCTTGGGCTGAATCACAATCCTTGCATCGGTGGTCTGCCAGGTATTGTCTTCTCCTGCCTGCTCCAAGGTCAACCATTGCAGCTGCATTCAGTCCGGATGGGAGAACACTTGCATCCACACATGGTGACCATACTGTTAAAATAATCGATTGCCAAACTGGGAAATGTTTGAAAGTGTTGCTTGGACATTGG ] [+] EMBL CB632261 [ TTTGCTCTATGGGATGCTAAAACCTCCCGTTGCATTGGATCACACTTCTTCTATAAGCAAATTGCATCAATTGCATTTCATGCAAAGGGGGAGCTTCTGGCGGTTGCTTCAGGGCACAAACTGTTCATATGGGACTACAATAAACGAGATGAAGCTTCTGACCCACCAATGATATTAAGAACTCGCCGTTCACTGAGAGCTGTTCAATTTCATCCCAATGGGGCTCCGTATCTACTGACTGCAGAGGTTAACAATCTTGATTCTGCTGATTCAGAACTGACCCATGCAACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTCTTC AATACAATAGATGT ] [+] EMBL CB670180 [ CCCATGCCACATCTTCTGGCTATTCAAACTCGCCTTCGGCTGTATTTTTTGCAATCATGAACTCCGCATGTTGTCCATACTCTGAGTCTAGGTTTTCATCACCGTGCTTGATCTGGCCTGCATATGTCAGAGATGATGGAAGCATATGTCTGCTTCGCAATGACTGGGTTAGTGGTTCATCCGATGTGCAGCAGCCATCAGATTCTGAAACTCAACAGGCTGGCCATATGGTTACACCTATGGATGTATGCCCTGGAGAACCTGGGGTGAATAATTATGATGATGAAGATTCTGCATCTTTATCAAATAGAATAGAAATGCATACTCCCAGTTGGCAGAATAGCTCAAGATTTCACAACAGTAGTGCTGCTACTGATCTTCACAGGATTGATATAAGACAAGTTTCTGACCTGAGCAGTGATACGCCAAATCCAGAAATGCCTGCACATTCAAGAATTGATGTTCCAAATAGTATGCCAATGGATTTGTTCGCCTTTTCAAATACAATAGATGTTCAAATGTTCCTAAGAGACGTAGAGGCCGGACATCACCATAATAATTACACTGGTGGATCACATAGCTGGGAACTGCCTTTTCTCCAGGGTTGGTTGATGGCACAAAACCGTACAGGATTGCGTGCAACACTTCCTAACAATGAGGTTATAGGAGACTTACCTATCGGTGGCACTGCTGGGACTGATAATGTGATGAATGAATCATCAAACATGTACAGTTTTGAACGTGTAGGGCCTTCATCATCAATTCC ATTACTACGGACAGTTTGAGAGGGCTAAGT AACATCGTCATATGC ] [-] EMBL CB670181 [ CACNTACATCAGAGCACATACTACTGGCATATGGTCGTCGTCATAACTCACTTCTGAGGGGCATTTTCATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTATAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAACA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACGTACGCTCTTATTAACATGATTTGCTGTTATGC ] [-] EMBL CB632262 [ ATGGATGGCAAGACCACAATCCCTGTGTACACTGTCTTGGAGGTGTACAGAGTTTCAGACATGGAGCTTGTAAGAGTTATCCCTAGTGCTGAAGATGAAGTCAATGTCGCATGTTTTCATCCTTCCCCTGGTGCAGGTCTTGTTTATGGGACTAAGGAAGGAAAGCTCAGGATAATTCAAAA CAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCA CTGAGACTCCGGAAAACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCCAAAACCACCATTAGTA ] [+] EMBL BQ906349 [ AATTCAACACCAATGTTGCAGACTACTAGGGGAAATATTCTTGAGGAACTTATCTCCACAGATTCATATGCCCAATGAATCATATCCCATCCCAGCTAAATCATGGTGGTCAATTTTGAAGGACCAACATGCAGATGTTCGCCTTCCTGAGTAATCCACAACATGATTGCACCTGAGACTCCGGAAAACATTTTGTGACGATCACTGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAAaaaaaaa ] [+] EMBL BM421270 [ AACATTTTGTGACGATCA TGAAGACTTCGCTCTGCACCTAGGTAACAGTGACGCGGGTAAGAACTAAGAAGCAAGCTGTGAGAGAACAGTCAAGGAAACCGCTCCCGGTGGCAGCATATGTGACTAAGTTAGTGGTTGACTAATTTCATTGCTAGAGGTAGAGCAGGAGGATGCTGGTGTATTGATGCTGCCTTAGCCAGAAAATGGGGTAGCAGATGAAATCTAGCAATTGGCATACATGTCAATGTGTCATGTTGCTCTGCATGACGTTGTCCTAATGGACTGTAACAATGGGATGTTGCTGCAATCAGAAGCACATACGCTCTTATTAACATGATTTGCTGTTATGCAAATCTTTTTTCTGCCGGTATATGGACTGGGGTTGGTGTATGTTGGGCAAATGAATCCC AAACCA CATTAGTAAATGCGAGAAAATGGGTATCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||