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Oryza sativa
cluster # 10977 cluster # 10977       Sequences # 8       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10977#0 length = 1393 sequences # 5  
consensus_10977#1 length = 804 sequences # 1  
consensus_10977#2 length = 435 sequences # 1  
consensus_10977#3 length = 139 sequences # 1  

consensusID : consensus_10977#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1393
fasta sequence
                              [CAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTCTCTCTCTATCTCAGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGAGAGAGAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGTACCATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTGGAGGCCCAAAATAAGTTGGTGAAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGCCATGCCATGAAGCGAGCTCGTGGATCTGGAGGGCGCTTCCTCAACACAAAGCAGC-TCGAGGAGCAGAAGCAGCAACAGGAGGAGGAGGCCGCATCCGGTGGCGCGAG-CTCTGG-CAATAGGACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAAAAAAAGTAGTTTCA-TCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAA-CTAAAAGCA-CTG-CAATGATCAA-CTGA-CTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAAAAGATGGTCCCCGTGAATATTGTAGCTT]

[+] EMBL AK101684             [CAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTCTCTCTCTATCTCAGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGAGAGAGAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGTACCATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTGGAGGCCCAAAATAAGTTGGTGAAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGCCATGCCATGAAGCGAGCTCGTGGATCTGGAGGGCGCTTCCTCAACACAAAGCAGC TCGAGGAGCAGAAGCAGCAACAGGAGGAGGAGGCCGCATCCGGTGGCGCGAG CTCTGG CAATAGGACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAAAAAAAGTAGTTTCA TCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAA CTAAAAGCA CTG CAATGATCAA CTGA CTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAACTGATGGTCCCCGTGAATATTGTAGCTT]
[+] EMBL BI796228             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CAAACCAGCTTCGAGGA CAGAACAAGCAACAGGAGGAGGA GCCGCATCC GTGGCGCGAGCCTCTGGCCAATAGGACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCT GTCGCGAACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGC ATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAAAAAAAGTAGTTTCA TCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAA CTAAAAGCA CTG C ATGATCAA CTGA CTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAAAA                          ]
[+] EMBL AU032676             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGGCCGCATCCGNTGGCGCGAG CTCTGG CAATAGGACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAAAAAAAGTAGTTTCA TCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAA CTAAAAGCA CTG CAATGATCAA CTGA CTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAAAA                          ]
[+] EMBL AA750033             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGCACG CATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCACCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCT                                                                                                                                                                                                                  ]
[+] EMBL BI797546             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AAAGTAGTTTCACTCCTCAAATGGACCCAACATGTGTGGCTCCATTTTAAGTTTTCCTGTAACCTAAAAGCACCTGCCAATGATCAACCTGACCTGTTGGTTCTGTTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAAAAaaaa                      ]


>consensus_10977#0 CAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTCTCTCT CTATCTCAGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGAGAGAG AGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGACCATCTCA TAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATG ATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATT CCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTC CAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATC AGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCA ACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCT TGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCC GGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGT ACCATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTGGAGGCCCAAAATAAGTTGG TGAAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGCCATGCCATGAAGCGAGCTC GTGGATCTGGAGGGCGCTTCCTCAACACAAAGCAGCTCGAGGAGCAGAAGCAGCAACAGG AGGAGGAGGCCGCATCCGGTGGCGCGAGCTCTGGCAATAGGACATGCCTTCAGAATGGCA CCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCGAGCGTCTCAACCAGCAGAG AATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCTGGCTTCCTTCCCACAATGA GCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCGAACGCCATTCACCAGCGCG TTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTCAGCTCAGCACCATCACTTT GGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGAAAATACCTTATGGGAAAAA AAAAAGTAGTTTCATCCTCAAATGGACCAAACATGTGTGGCTCCATTTTAAGTTTTCCTG TAACTAAAAGCACTGCAATGATCAACTGACTGTTGGTTCTGTTTGTGGATGCTTATATCT GTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCTGAAAAAGATGGTCCCCGTG AATATTGTAGCTT



consensusID : consensus_10977#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 804
fasta sequence
                              [GAGCACAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTCTCTCTCTATCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGAGAGAGAGGCATCTTTTGATAGAAAGGATTAGAGCTAATCCTTTGATGGGCAACAAAATCCCCACCAATCTGAAGAGGTCAGGTTAAAAGCCCTATCAGTTCAATTTGCTTAAGTTAATGTTATCAACTTGTCTTGAAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGTACCCATGC]

[+] EMBL CB680518             [GAGCACAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTCTCTCTCTATCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGAGAGAGAGGCATCTTTTGATAGAAAGGATTAGAGCTAATCCTTTGATGGGCAACAAAATCCCCACCAATCTGAAGAGGTCAGGTTAAAAGCCCTATCAGTTCAATTTGCTTAAGTTAATGTTATCAACTTGTCTTGAAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCAAAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCATACTACGCCCAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAGATGTATGATCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTTGTAAACGCAAAGCAGTACCCATGC]


>consensus_10977#1 GAGCACAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTC TCTCTCTATCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGA GAGAGAGGCATCTTTTGATAGAAAGGATTAGAGCTAATCCTTTGATGGGCAACAAAATCC CCACCAATCTGAAGAGGTCAGGTTAAAAGCCCTATCAGTTCAATTTGCTTAAGTTAATGT TATCAACTTGTCTTGAAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCA AAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCAT ACTACGCCCAACTATGATTTTTTCTCTGGAGATTATCAGATGAAGCAGTTAGGTCATAAG ATGTATGATCAAGATTCCCCGTCAAGCGATTCTGGACAGTCACACCAAGAAGAATCTGCC ATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATGGT CATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAGCT TTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATGCA TACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAAAT GGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATATTT GTAAACGCAAAGCAGTACCCATGC



consensusID : consensus_10977#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence
                              [NNTNTCCTCTNCCCCGTGNTCCCCATTTNTNCTTCTTTACCCACAAATNNNTCTNTCTANCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCAAAGCGGGACAGGAGAGAGAGTCTAATNATAGAAGTACACGAAGAAAAATGGTGCCTGGACCANAGTGAGACCATCTCATAATGCTAATNCTTTTGCGNCAAATGGANGATCATCGAGCCCATACTACGNCCAACTATGATTTTTNCTCTGGAGATTATCAGATGANGCAGTTAGGTCATAAGATGTATGGTCAAGATTCCCCGTCAAGCGATNCTGGTCAGTCACACCAAGAAGAATCTGCCATGAATGTTAGCAGTCCAAATNAGCGACATACCTCAACACANTCTGACAATGATGATGGGCATCAGATGCCAGNTCAGGGCAAACAAAGGCAGTA]

[+] EMBL OSS13453A            [NNTNTCCTCTNCCCCGTGNTCCCCATTTNTNCTTCTTTACCCACAAATNNNTCTNTCTANCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCAAAGCGGGACAGGAGAGAGAGTCTAATNATAGAAGTACACGAAGAAAAATGGTGCCTGGACCANAGTGAGACCATCTCATAATGCTAATNCTTTTGCGNCAAATGGANGATCATCGAGCCCATACTACGNCCAACTATGATTTTTNCTCTGGAGATTATCAGATGANGCAGTTAGGTCATAAGATGTATGGTCAAGATTCCCCGTCAAGCGATNCTGGTCAGTCACACCAAGAAGAATCTGCCATGAATGTTAGCAGTCCAAATNAGCGACATACCTCAACACANTCTGACAATGATGATGGGCATCAGATGCCAGNTCAGGGCAAACAAAGGCAGTA]


>consensus_10977#2 NNTNTCCTCTNCCCCGTGNTCCCCATTTNTNCTTCTTTACCCACAAATNNNTCTNTCTAN CTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCAAAGCGGGACAGGAGAGAGAGTC TAATNATAGAAGTACACGAAGAAAAATGGTGCCTGGACCANAGTGAGACCATCTCATAAT GCTAATNCTTTTGCGNCAAATGGANGATCATCGAGCCCATACTACGNCCAACTATGATTT TTNCTCTGGAGATTATCAGATGANGCAGTTAGGTCATAAGATGTATGGTCAAGATTCCCC GTCAAGCGATNCTGGTCAGTCACACCAAGAAGAATCTGCCATGAATGTTAGCAGTCCAAA TNAGCGACATACCTCAACACANTCTGACAATGATGATGGGCATCAGATGCCAGNTCAGGG CAAACAAAGGCAGTA



consensusID : consensus_10977#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 139
fasta sequence
                              [TCGGACATCAGTTCAGTGTTCAACTTAGAGTTCAGTATTAGATACAGCAGTACAGATATAAGCATTCACAAACAGAACACAGTCAGTGTCATGCGTGCTTTGTACAGAACTAATGAGCACACATGTTGTCATGAGATGA]

[+] EMBL AA749808             [TCGGACATCAGTTCAGTGTTCAACTTAGAGTTCAGTATTAGATACAGCAGTACAGATATAAGCATTCACAAACAGAACACAGTCAGTGTCATGCGTGCTTTGTACAGAACTAATGAGCACACATGTTGTCATGAGATGA]


>consensus_10977#3 TCGGACATCAGTTCAGTGTTCAACTTAGAGTTCAGTATTAGATACAGCAGTACAGATATA AGCATTCACAAACAGAACACAGTCAGTGTCATGCGTGCTTTGTACAGAACTAATGAGCAC ACATGTTGTCATGAGATGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10977#1      GAGCACAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTC 60
consensus_10977#2      ---------NNTNTCCTCTNCCCCGTGNTCCCCATTTNTNCTTCTTTACCCACAAATNNN 51
consensus_10977#0      -----CAGTCCTCTCCTCTTCCCCGTGCTCCCCATTTCTGCTTCTTTTCCCACAAATTTC 55
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      TCTCTCTATCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGA 120
consensus_10977#2      TCTNTCTANCTCGGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCAAAGCGGGACAGGA 111
consensus_10977#0      TCTCTCTATCTCAGAAAGGATTCGGGAGACTTGAAGAGAGGAGCTCGAAGCGGGACAGGA 115
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      GAGAGAGGCATCTTTTGATAGAAAGGATTAGAGCTAATCCTTTGATGGGCAACAAAATCC 180
consensus_10977#2      GAGAGAGTC--------------------------------------------------- 120
consensus_10977#0      GAGAGAGGC--------------------------------------------------- 124
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      CCACCAATCTGAAGAGGTCAGGTTAAAAGCCCTATCAGTTCAATTTGCTTAAGTTAATGT 240
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      ------------------------------------------------------------
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      TATCAACTTGTCTTGAAGGCTAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCA 300
consensus_10977#2      --------------------TAATNATAGAAGTACACGAAGAAAAATGGTGCCTGGACCA 160
consensus_10977#0      --------------------TAATTATAGAAGTACACGAAGAAAAATGGTGCCTGGACCA 164
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      AAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCAT 360
consensus_10977#2      NAGTGAGACCATCTCATAATGCTAATNCTTTTGCGNCAAATGGANGATCATCGAGCCCAT 220
consensus_10977#0      AAGTGAGACCATCTCATAATGCTAATGCTTTTGCGACAAATGGAAGATCATCGAGCCCAT 224
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ACTACGCCCAACTATGATTTTTTCTCTGGAGATTA-TCAGATGAAGCAGTTAGGTCATAA 419
consensus_10977#2      ACTACGNCCAACTATGATTTTTNCTCTGGAGATTA-TCAGATGANGCAGTTAGGTCATAA 279
consensus_10977#0      ACTACGCCCAACTATGATTTTTTCTCTGGAGATTA-TCAGATGAAGCAGTTAGGTCATAA 283
consensus_10977#3      -------------------------TCGGACATCAGTTCAGTGTTCAACTTAGAGTTCAG 35
                                                  *** ** * *    **    * ****     * 

consensus_10977#1      GATGTATGATCAAGATTCCCCGT-CAAGCGATTCTGGACAGTCACACCAAGAAGAATCTG 478
consensus_10977#2      GATGTATGGTCAAGATTCCCCGT-CAAGCGATNCTGGTCAGTCACACCAAGAAGAATCTG 338
consensus_10977#0      GATGTATGATCAAGATTCCCCGT-CAAGCGATTCTGGACAGTCACACCAAGAAGAATCTG 342
consensus_10977#3      TAT-TAGATACAGCAGTACAGATATAAGCATTCACAAACAGA-ACAC-AGTCAGTGTCAT 92
                        ** **    **  * * *   *  ****  *      ***  **** *   **  **  

consensus_10977#1      CCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATG 538
consensus_10977#2      CCATGAATGTTAGCAGTCCAAATNAGCGACATACCTCAACACANTCTGACAATGATGATG 398
consensus_10977#0      CCATGAATGATAGCAGTCCAAATGAGCGACATACCTCAACACAATCTGACAATGATGATG 402
consensus_10977#3      GCGTGCTTTGTA-CAGAACTAATGAGC-ACACATGTTGTCATGAGATGA----------- 139
                        * **  *  ** ***  * *** *** *** *  *   **     ***           

consensus_10977#1      GTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAG 598
consensus_10977#2      GGCATCAGATGCCAGNTCAGGGCAAA-CAAAGGCAGTA---------------------- 435
consensus_10977#0      GTCATCAGATGCCAGATCAGGACAAAACAAAGTCAGTATCATCGTTGGGGAATCCAGGAG 462
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      CTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATG 658
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      CTTTGCCTCCAAAGCTCAACTATAGCCAATCCTTTGCTTGTATTCCTTATACAGCTGATG 522
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      CATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAA 718
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      CATACTATGGTGGGGTCTTGACTGGATATTCTTCACATGCAATTGTTCATCCCCAGCAAA 582
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATAT 778
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      ATGGTACAGCTAACTCCCGGGTGCCGTTGCCTGTTGAGCCTGCAGCAGAAGAGCCAATAT 642
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      TTGTAAACGCAAAGCAGTACCCATGC---------------------------------- 804
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      TTGTAAACGCAAAGCAGTACC-ATGCAATTCTTAGGAGGAGACAGATACGAGCTAAATTG 701
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      GAGGCCCAAAATAAGTTGGTGAAAGGTCGGAAGCCATACCTCCATGAATCTCGGCATCGC 761
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      CATGCCATGAAGCGAGCTCGTGGATCTGGAGGGCGCTTCCTCAACACAAAGCAGCTCGAG 821
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      GAGCAGAAGCAGCAACAGGAGGAGGAGGCCGCATCCGGTGGCGCGAGCTCTGGCAATAGG 881
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      ACATGCCTTCAGAATGGCACCGGTAGCGCGCCTTCAGCTTCCTCTCCCTCTGAAATCGCG 941
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      AGCGTCTCAACCAGCAGAGAATTCCTTGGTAACCATGAGCAGAGCCACTTCCCCTCAGCT 1001
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      GGCTTCCTTCCCACAATGAGCTTCAGAGCGCAGAATGGCGGAGATGGGAAGCTGGTCGCG 1061
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      AACGCCATTCACCAGCGCGTTTCCATGATGAGGTGAGGTGAAGAGGGGTGAAGTGGGTTC 1121
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      AGCTCAGCACCATCACTTTGGCTCTCTCCCTGCTGGTGGCAATTCATCCTTGGCTTATGA 1181
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      AAATACCTTATGGGAAAAAAAAAAGTAGTTTCATCCTCAAATGGACCAAACATGTGTGGC 1241
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      TCCATTTTAAGTTTTCCTGTAACTAAAAGCACTGCAATGATCAACTGACTGTTGGTTCTG 1301
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      ------------------------------------------------------------
consensus_10977#2      ------------------------------------------------------------
consensus_10977#0      TTTGTGGATGCTTATATCTGTACTTGCTGTATCTAATACTGAACTCTAAGTTGAAACCCT 1361
consensus_10977#3      ------------------------------------------------------------
                                                                                   

consensus_10977#1      --------------------------------
consensus_10977#2      --------------------------------
consensus_10977#0      GAAAAAGATGGTCCCCGTGAATATTGTAGCTT 1393
consensus_10977#3      --------------------------------
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)