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Oryza sativa
cluster # 10982 cluster # 10982       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_10982#0 length = 1683 sequences # 7  
consensus_10982#1 length = 804 sequences # 1  

consensusID : consensus_10982#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1683
fasta sequence
                              [TCCCCTTGCTTTCTCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGACGGCGAGAGGGAGCATATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGCGGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCACCTGGACGCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGCGGACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGATGGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGTCTACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGAGAAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAATTGATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGCATACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGCAGGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCGCCGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCTCTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCAAAGGATTTCAGCA-AGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCAAAGTTGCTCTACA-TTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGTGAATTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCA-CAGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTTGTACTGATGTAAGCATACGAGCA-TAGTTTTCAGGTTTTGCTTTTTTTGCATTAGTTGCCTGTTGCAATGTTGAAAAGGATATACTA-CTTCATTAGTGGATTTCCCCTGTTTTTTGCTCTCCAA]

[+] EMBL AK106276             [TCCCCTTGCTTTCTCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGACGGCGAGAGGGAGCATATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGCGGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCACCTGGACGCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGCGGACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGATGGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGTCTACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGAGAAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAATTGATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGCATACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGCAGGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCGCCGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCTCTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCAAAGGATTTCAGCA AGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCAAAGTTGCTCTACA TTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGTGAGTTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTCGTTGCTCTTTCTCA CAGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTTGTACTGATGTAAGCATACGAGCA TAGTTTTCAGGTTTTGCTT                                                                                  ]
[+] EMBL CB675459             [                                     CGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGGCGGCGAGAGGGAGCATATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGCGGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCACCTGGACGCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGCGGACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGATGGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGTCTACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGAGAAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAATTGATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGnt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB656011             [                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGCGGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCACCTGGACGCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGCGGACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGATGGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGTCTACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGAGAAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAATTGATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGCATACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGCAGGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCGCCGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCTCTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAAACACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB675460             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGATGACAGGAGATACTGTTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGCATACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGCAGGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCGCCGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCTCTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCAAAGGATTTCAGCA AGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCAAAGTTGCTCTACA TTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGTGAATTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCA CAGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTTGTACTGATGTAAGCATACGAGCA TAGTTTTCAGGTTTTGCTTTTTTTGCATTAGTTGCCTGTTGCAATGTTGAAAAGGATATACTANCTTCAT                               ]
[-] EMBL CB656012             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TTCGGTCGCCGCGTCTGCAGCTCGGAGCAGATCCATGGGTGGGACAAGAAGCTTGTGCGTTTCCAGCTCTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTGGCATGGACGACTGAACAACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCAAAGGATTTCAGCA AGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCAAAGTTGCTCTACA TTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGTGAATTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCA CAGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTTGTACTGATGTAAGCATACGAGCA TAGTTTTCAGGTTTTGCTTTTTTTGCATTAGTTGCCTGTTGCAATGTTGAAAAGGATATACTA CTTCATTAGTGGATTTCCCCTGTTTTTTGCTCTCCAA]
[+] EMBL BM038165             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             tTCA ACGCCCA CAC CCTTGTCCCAGT CTACCTGGACGAGCCAGGAAGCTGGATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAGTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCCAAGGATTTCAGCC AGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCCAAGTTGCTCTACACTTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGATAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCCATGGAAGAATGGAGTGAAATTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCA CGGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCC AAGTGCTTGTACTGATGTAAGCATACGAGCACTAGTTTTCAGGTTTTGCTTTTTTTGCATTAaaaaaa                                                                 ]
[+] EMBL BM038765             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAGTTCTGCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTGCTGATTTATCCCNAAGGATTTCAGCANAGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGAGTTTGTGCACTCGACCCAAGTTGCTCTACA TTAGAGGATTAGAGCTGTAGATAGTGTAGTGTAGATAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCCATGGAAGAATGGAGTGAAATTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCACCGGTGGTGGCCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTTGTACTGATGTAANCATACGANCA TA TTTTCA GTTTTCCTTTTTTT CATTA TTCCCT TT C ATTTTGAAAAGGATATACTA CTTCATTATTGGATTaaaaaa                ]


>consensus_10982#0 TCCCCTTGCTTTCTCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGC GAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGT CCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGT TATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAAC GCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGA TCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAAT AGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGACGGCGAGAGGGAGCAT ATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGC GGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCACCTGGAC GCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGCG GACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGAT GGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGTC TACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGAG AAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAATT GATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGCA TACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGCA GGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCGC CGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCTC TCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTGG ATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAAG TTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGTG CTGATTTATCCCAAAGGATTTCAGCAAGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTGA GTTTGTGCACTCGACCAAAGTTGCTCTACATTAGAGGATTAGAGCTGTAGATAGTGTAGT GTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGTG AATTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCACAGTGGTGGC CATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCTT GTACTGATGTAAGCATACGAGCATAGTTTTCAGGTTTTGCTTTTTTTGCATTAGTTGCCT GTTGCAATGTTGAAAAGGATATACTACTTCATTAGTGGATTTCCCCTGTTTTTTGCTCTC CAA



consensusID : consensus_10982#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 804
fasta sequence
                              [TCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGGCGGCGAGAGGGAGCATATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCNGCAAGGTCGCGGGCGGCGCCGGGCTTGGCGAGCTGCCGGAGCTGTGCGCCGNCGAGGTGCTGCTGCACACTGGACGCGCCNGAGATATGCCGGCTCGCGCGGNTCAACCGCGCGTTTCGCGCGCCGCGGCGGGGACTCNTGTGGAAGCGAACTGCCGAGAATACGGTATCTCTGACTTNTCATGGCGCCCGTGNGAGCGGAGAGAATAAAGATCCTATGGGAAAAGATTTACCAAGTCCGCAGCTGCCTTGACGGGCAGAAGAATTGGGGTAAAACCGCGGGTTGAACTTGGCAAACCGTGATAGATTGGAGAAATGGTTACTCACCGATTGTGCTTGGCTCCCGAGATGG]

[+] EMBL AW155452             [TCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGGCGGCGAGAGGGAGCATATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCNGCAAGGTCGCGGGCGGCGCCGGGCTTGGCGAGCTGCCGGAGCTGTGCGCCGNCGAGGTGCTGCTGCACACTGGACGCGCCNGAGATATGCCGGCTCGCGCGGNTCAACCGCGCGTTTCGCGCGCCGCGGCGGGGACTCNTGTGGAAGCGAACTGCCGAGAATACGGTATCTCTGACTTNTCATGGCGCCCGTGNGAGCGGAGAGAATAAAGATCCTATGGGAAAAGATTTACCAAGTCCGCAGCTGCCTTGACGGGCAGAAGAATTGGGGTAAAACCGCGGGTTGAACTTGGCAAACCGTGATAGATTGGAGAAATGGTTACTCACCGATTGTGCTTGGCTCCCGAGATGG]


>consensus_10982#1 TCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGCGAGCTCGCACAAA TTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGTCCTTGGCATCTGA TGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGTTATTGGGAGGCTT TTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAACGCTGGAATCACTG ACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGATCGAGTTCTTTGG AAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAATAGGCGCGGCTTCT GTGCTCGTAGATAAGCTGCGGCGACCGGAGGCGGCGAGAGGGAGCATATGGGCGCGGGCG TGTCAGACCTCGCGGCGGGGATGGAGGCCGTCNGCAAGGTCGCGGGCGGCGCCGGGCTTG GCGAGCTGCCGGAGCTGTGCGCCGNCGAGGTGCTGCTGCACACTGGACGCGCCNGAGATA TGCCGGCTCGCGCGGNTCAACCGCGCGTTTCGCGCGCCGCGGCGGGGACTCNTGTGGAAG CGAACTGCCGAGAATACGGTATCTCTGACTTNTCATGGCGCCCGTGNGAGCGGAGAGAAT AAAGATCCTATGGGAAAAGATTTACCAAGTCCGCAGCTGCCTTGACGGGCAGAAGAATTG GGGTAAAACCGCGGGTTGAACTTGGCAAACCGTGATAGATTGGAGAAATGGTTACTCACC GATTGTGCTTGGCTCCCGAGATGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_10982#0      TCCCCTTGCTTTCTCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGC 60
consensus_10982#1      -------------TCCATCTCCGGAGATCGGAGCTCGCGTTTTTACCTCACGAATAGCGC 47
                                    ***********************************************

consensus_10982#0      GAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGT 120
consensus_10982#1      GAGCTCGCACAAATTCTATTCCGCGACGCGATAGTCTTGCACTCTTGCCCCGCGCTGAGT 107
                       ************************************************************

consensus_10982#0      CCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGT 180
consensus_10982#1      CCTTGGCATCTGATGCTTTATCTCTCCAAAAGTTGCAGCTTAAAGCATAGCAAGTGCGGT 167
                       ************************************************************

consensus_10982#0      TATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAAC 240
consensus_10982#1      TATTGGGAGGCTTTTGTTGCAAGAACTGGATTTTTCCCGCCGGTTATTCGAATCGGGAAC 227
                       ************************************************************

consensus_10982#0      GCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGA 300
consensus_10982#1      GCTGGAATCACTGACACCTATTCGTCGTGAGGATTGATTCCGCGAGAACTCGATTCGGGA 287
                       ************************************************************

consensus_10982#0      TCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAAT 360
consensus_10982#1      TCGAGTTCTTTGGAAGCTGGTTCCCCATTGCTGCGCCGTGCGCGCGTGGAATCCAATAAT 347
                       ************************************************************

consensus_10982#0      AGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGACGGCGAGAGGGAGCAT 420
consensus_10982#1      AGGCGCGGCTTCTGTGCTCGTAGATAAGCTGCGGCGACCGGAGGCGGCGAGAGGGAGCAT 407
                       ******************************************* ****************

consensus_10982#0      ATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCGGCAAGGTCGCGGGC 480
consensus_10982#1      ATGGGCGCGGGCGTGTCAGACCTCGCGGCGGGGATGGAGGCCGTCNGCAAGGTCGCGGGC 467
                       ********************************************* **************

consensus_10982#0      GGCGCCGGGCTGGGCGAGCTGCCGGAGCTGTGCGCCGCCGAGGTGCTGCTGCAC-CTGGA 539
consensus_10982#1      GGCGCCGGGCTTGGCGAGCTGCCGGAGCTGTGCGCCGNCGAGGTGCTGCTGCACACTGGA 527
                       *********** ************************* **************** *****

consensus_10982#0      CGCGCCGGAGATATGCCGGCTCGCGCGGCTCAACCGCGCGTTCCGCGGCGCCGCGGCGGC 599
consensus_10982#1      CGCGCCNGAGATATGCCGGCTCGCGCGGNTCAACCGCGCGTTTCGCG-CGCCGCGGCGG- 585
                       ****** ********************* ************* **** *********** 

consensus_10982#0      GGACTTCGTGTGGGAAGCGAAGCTGCCGGAGAATTACGGGTATCTCCTGGACTTCGTCGA 659
consensus_10982#1      GGACT-CNTGTGG-AAGCGAA-CTGCCGAGAA--TACGG-TATCTCT--GACTT--NTCA 635
                       ***** * ***** ******* ******   *  ***** ******   *****     *

consensus_10982#0      TGGCGCCATGGAGGGCGGAGGAGGAGGAAGAGAGAGGAGCGTGATGGGGAAGAAGGAAGT 719
consensus_10982#1      TGGCGCCCGTGNGAGCGGAG--------AGAATAAAGATCCT-ATGGGAAAAGA------ 680
                       *******   * * ******        ***   * ** * * ***** **  *      

consensus_10982#0      CTACGCGAGGCTCGCCAAGGCTGTGCCATTTGACGGTGGCAAGAAGGAATTATGGTTGGA 779
consensus_10982#1      -TTTACCAAGTCCGCAGCTGCCTTGACGGGCAGAAGAATTGGGGTAAAACCGCGGGTTGA 739
                        *   * * *  ***    **  ** *        *      *    **    ** * **

consensus_10982#0      GAAGAGCAAAGGCGGTGTTTGCATAGCCTTGTCGTCGAAATCACTGGTGATAACGGGAAT 839
consensus_10982#1      ACTTGGCAAA--CCGTGATAGATTGGAGAAATGGTT--ACTCACCGATTGTGCTTGGCTC 795
                            *****  * *** * *  * *     * **   * **** * *  *    **   

consensus_10982#0      TGATGACAGGAGATACTGGTCTCACATGCCAACCACGGAATCTAGGTTCCATTCGGTTGC 899
consensus_10982#1      CCGAGATGG--------------------------------------------------- 804
                           **  *                                                   

consensus_10982#0      ATACCTGCAGCAGATATGGTGGTTTGAGGTGGTTGGAGAGCTCGAATTCTGCTTCCCGGC 959
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      AGGGACCTACAGCCTCTACTTCAGGCTCCATCTTGGGAAGGCATCCACACGTTTCGGTCG 1019
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      CCGCGTCTGCAGCTCGGAGCAGATCCATGGCTGGGACAAGAAGCCTGTGCGCTTCCAGCT 1079
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      CTCAACGTCAGACGGCCAGCACGCCTTGTCCCAGTGCTACCTGGACGAGCCAGGAAGCTG 1139
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      GATTCTTTACCATGTTGGTGATTTCGTCGCATCGACGACTGAACAACCCATCAAGCTCAA 1199
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      GTTCTCCCTGGCACAGATCGACTGCACCCATACGAAAGGTGGTCTCTGCGTCGATTCAGT 1259
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      GCTGATTTATCCCAAAGGATTTCAGCAAGAGAAGGTGATTAGTTCTCAGAAGTGAAAGTG 1319
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      AGTTTGTGCACTCGACCAAAGTTGCTCTACATTAGAGGATTAGAGCTGTAGATAGTGTAG 1379
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      TGTAGACAATAGCCTACCGTTTTTAACTTGGGCTTATTGTATGCAATGGAAGAATGGAGT 1439
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      GAATTTTTTTTGTGCGGCGGCGTGATGAGTGAGCTTTGTTGCTCTTTCTCACAGTGGTGG 1499
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      CCATGGTGCTGAGGGGAATGTCTTGAGCTCACTTACCTTCAGTCACGGCTCCAAAGTGCT 1559
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      TGTACTGATGTAAGCATACGAGCATAGTTTTCAGGTTTTGCTTTTTTTGCATTAGTTGCC 1619
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      TGTTGCAATGTTGAAAAGGATATACTACTTCATTAGTGGATTTCCCCTGTTTTTTGCTCT 1679
consensus_10982#1      ------------------------------------------------------------
                                                                                   

consensus_10982#0      CCAA 1683
consensus_10982#1      ----
                           




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)