These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_10990#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 1412 fasta sequence [AGGGAAAGGGTCGAGAGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA-CCG-CAAGTTCCTGCCTATAG-TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA-CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT-GGGGTTTC-TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA-TTGA-CTTGTGATCAA-TGCCCTGGCACAAGTGCGACAGATTC-TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA-TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGATGGTTTTGCTATTTGCCGCCCAAATCTGCGTTGAAAATGAAATGTACAG] [+] EMBL AK059475 [AGGGAAAGGGTCGAGAGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTGTGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGA ] [+] EMBL AK102993 [ AGAGAGGTCAGTAGTAGCGTAGTGAGCGGCGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTGTGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAACAAGCGATCCCTGTGTGATGGTTTTGCTATTTGCCGCCCAAATCTGCGTTGAAAATGAAATGTACAG] [+] EMBL OSC109201 [ CGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGT ] [+] EMBL BP184953 [ acgaGGCGGCGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAACCCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTC ] [+] EMBL BP184850 [ acgaGGCGGAGATGGGGAAGGGCGGCGAGCTGTGGGACGATTCGGCGCTGGTAGACGCGTTCGACCACGCCGTCGCCACCTTCAAGGCTATGCATAGCAAAAACACCCAAGCAACTACATCGGAGAATGAGGAACCAGGAGATCCTGCTGTTGCTGCCCCTGCTGGAGAAGAGAACATTTCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCGCATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TT ] [+] EMBL CA753516 [ nGGAGAAGAGAACATTNCGGCTGAGGTGGCCGATGAGCTCATAGAGAAGGATGGTAGCCAGACAGAACCTTGTGAAGCATCGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGTTATTACAATGAATGGGTAAAAAAGTACTATGAACTTGAGGAGCAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACCAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCCACAA CCGCCAAGTTCCTGCCTATAGTTGCCACAGCACCAGATCCGCATTCCTCCACCCTTCCATCCCCATGCTGTTGTGCGAATGTACCCCCTGGTATTAGTCTCCTGCTGTTCAACTGGCCCGACGAGTGGGGGGTTCTTTCTTGTATTCCACCAGGTGGTGGTTGTACCTTATTATTTGACCTTGTGAACAATTCCCCCGGCCCCAGTCCCACAAAATCTTACTGGACCCACCT ] [+] EMBL CA763923 [ aaggggGGAGACACCATATCAGACCCATGAGGAAAGAAAGTCCACTGAGCAGGCTCCTCTTCAGGAAAAGGATCTGGATAAAGAGGCACATTTTTCAGAACCTAAGATCCATGCCTCAGATGTTGCTGATGCTGAGCAAAAAGATACCTCAAACCAGCAGACCTGGGACTACAATGAATTGGTAAAAAAGTACTATGAACTTGAGGAACAAAGCCGGAAAGTTCTTGAGCAACTCCATCAAACAAACTACTGGAATTACCAAGTCCCTGGTCAATCTTCAGTGTACCAACAA CCG CAAGTTCCTGCCTATAG TGCCACAGCACCAGATCCACATTCCTCAACCATTCAATCCCCATGCTGTTGTGCGAATGTA CCCCTGGTATCAGTCTCCTGCTGTTCAACTGGCCAGACGAGT GGGGTTTC TTCTTGTATGCAACCAAGTGGTGGTTGTAGCATATCA TTGA CTTTTGATCAA TGCCCTGGCACAAGTGCAACAGATTC TACTGGAGCAACCTGCGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGA TCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTNCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGNGATCNTGNCGGTGGCTTAAATGCATGGTACGCAGCGGGGNTTTACACTGGCAGGTACCTTATGCAGCAGTCCATGNAAAATACCAGACAAGGCTGACTTTTATTAAAAAGNCATTTGGAGGATCGNCNAANAGGTCCTTT CNCTNCAG AAAATCAAAAAATCTATTGGCAACTCGGGGAACTGGACATTCa ] [+] EMBL BP184851 [ GGTTGTAGCATATCA TTGA CTT TGATCAA TGCCCTGGCACAAGTGCGACAGATTC TACTGGAGCAACCTGTGTGCAGCAGGCAGAAAAGGTGTCTACTGACAGTGATTCAAGTTGCTAAGGCTGCAATGATGACTGCTGAAGGTGCCATGAATTTCATGAGAAGTACGATATCTGGAGACTTGGGCTCCTTTCCAAGAACAGACGCTGCATCTGGAAAGGAGAGCATGCCTATGGGCATGAATCCAAATTTTGACACCATGGGAGCAGATAGTGATCTTGCTGTTGTCTTAAATGCATGGTACGCAGCGGGGTTTTACACTGGCAGGTACCTCATGCAGCAGTCCATGAAAAATACCAGACAAGGCTGACTTCTATTAAAAAGCCATTTGGAGTATCGCCAAAGATGTCCTTTCCACTCCAGAAAAATCAAGAGATCTATTGACAACTCGTGGAACTGAACATTCCATTAGCATATGTAATGCTATCAGTGCTTTTCTAGCAAGAGTTATGGTACAATTATACATGAATTTGCTGTAAGGCTCTGATTAGACATTAAGGAGAAACGATGGTACTGATCATTTTGCTATCCAAATCTATCAGATGATCTGTAGAAAAAAaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||