These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11000#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1678 fasta sequence [AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAATAAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATGGGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCCATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATCGGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTTCCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATCCAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAAGCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCATTCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAACAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA] [+] EMBL AK063948 [AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCACGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAATAAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATGGGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCCATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATCGGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTTCCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATCCAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAAGCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCATTCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAACAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA] [-] EMBL CB647641 [ CGTG TTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGAGAAGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGAATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCT ] consensusID : consensus_11000#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1266 fasta sequence [CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAAGAGCTGCCCCAAC] [+] EMBL CB647640 [CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCCTATCCGATAAGCAAGCTGCTGGACCCTCTGCTTGGTAAAGGTCATACAGCTCTTTTCCG ] [+] EMBL CB680396 [ GTCCCCCCTTCTCCCCCTCGCCGCTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCGGAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGGAGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCTTCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATGTCGGGGCTCACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCACCGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCTGCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGATAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCAC ] [+] EMBL CB000109 [ TCCTTGATAGCTTGGTGACTGCTTGGGGTGCCCTTTTGATCTCAGTGACATTGATCCTGCTGTTCGGTGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGCTCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCTGCTGGACCATCTGCTTGGTAAAGGTCATACAGCTCTTTTCCGTAGAGCTGAACTAAAAACACTCGTGACCCTGCATGGAAATGAGGCTGGTAAAGGTGGGGAGTTAACCCACGATGAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATGACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATGCAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAAGAGCTGCCCCAAC] consensusID : consensus_11000#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 513 fasta sequence [AATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAAAAAAAAAAAAGAAAAACTCGAGAC] [-] EMBL CF305683 [AATGGTCCAAAGATCAATCAGATGTTCTTCAAATACATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAGTGATTTTGCTTGGTCCTGGGACAGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTCAATGGTGCTCCTTCGGAAAAAAAAAAAAAGAAAAACTCGAGAC] consensusID : consensus_11000#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 494 fasta sequence [CAGATGTTCTTCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAA-CGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACACGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTC-ATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA] [+] EMBL BI804907 [CAGATGTTCTTCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATCATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGACGTACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGTGCCATACCTTTCTTTTGGCTGAGGGGAAGTGCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAA CGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTTGTGTGATTTTGCTTGGTCCTGGGACACGTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGTGCCGCTCTGAGTC ATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA] [+] EMBL BI804884 [ GAGGATGTCATAGAAGA CTGCTCCAGGAGGAGATATCCGATGAGCCAGACGTACATGTTGAAGAAC ATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAAATCGGT CCATACCTTTCTTTT GCTGAGGGGAAGTCCCGGGTGCAAATATGTGTTTATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACCGGGGGTTGAATTGGTTCATTTGAACAGCTGGTACGAATAGTAGT CAGTAGTAGAGAGGGACCAA GGTTGTGTGATTTTGCTTGGTCCTGGGACA GTAGGATTGCGTAGTTATGAAACTGTACTGGTTATCCCGGGATTTTGACGCGGTAATAGT CCGCTCTGAGTCAATGGTGCTCCTTCGGAAGGCTTCGCTTTCTAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 ---------------------------AGGACGGCGCGGCTGCTCCGGTGAGCCGCGCCA 33 consensus_11000#1 CTCGCCCCGCTCGCTCGGGCAGCGCACACCACGCGGCGTCCCTCCCGCTCCCCCTCGCCG 60 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 CGGAATCGGGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTAAGTCCTTGACAAAGG 93 consensus_11000#1 CTAAATAGCGCGGGAGCCGCGGGCTCCGGCGAGCGCGAGAGGAGAGAGGAGGAGGCGGCG 120 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 TCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAACATTATTGGATTGATATTGGT 153 consensus_11000#1 GAGGAGGAGGAGGCGGTGGTGCGTCGCGAGCGCGGAAGGGAAGGGGAGTAGTAGGGGGGG 180 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCTATAAAGAGCGTAACTATCCG 213 consensus_11000#1 AGTGGCGTCGGCGTCGGCGGCGGATGGCGGTGGAGTACCACTGCTGCGGGGCGGCCTTCT 240 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 CAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGACATCCTAAATGAATTTCAGAA 273 consensus_11000#1 TCGAGCACGTGGTGATCATCGTGGTGCTGGTGCTCTTCGCGGGGCTCATG--TCGGGGCT 298 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAATGCAAATTATGCAGCTGAACC 333 consensus_11000#1 CACCCTGGGGCTCATGTCCCTCAGCCTCGTCGACCTCGAGGTCCTCGCCAAGTCCGGCAC 358 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 TCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCAATTGATGATAAGCATGGTGA 393 consensus_11000#1 CGACCAGGACCGCAAGCACGCAGCTAAGATATTGCCTGTTGTGAAAAACCAGCACCTTCT 418 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GA-AGGTTGTGAAGAATCTTCCTCCACTAAGAAGATGGAAGAGCTGCCCCAACTCTCAGA 452 consensus_11000#1 GCTATGTACTCTTCTGATCTGCAATGCTGCAGCCATGGAGGCTCTGCCCATATTCCTTGA 478 consensus_11000#2 ---------------------------AATGGTCCAAAGATCAATCA----GATGTTCT- 28 consensus_11000#3 ---------------------------------------------CA----GATGTTCT- 10 consensus_11000#0 ATTCTAATAGAGGGAACAGGAATAGAAAATGGTCCAAAGATCAATCA----GATGTTCT- 507 consensus_11000#1 TAGCTTGGTGACTGCTTGGGGTGCGATTTTGATCTCAGTGACATTGATCCTGCTGTTCGG 538 * * ***** consensus_11000#2 TCAAATAC--ATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATC 86 consensus_11000#3 TCAAATACCACTGAAGACCCATTGCCGACCCTGAATGAAGATGAAGAAGCTGTCGGTATC 70 consensus_11000#0 TCAAATAC--ATGAAGAGCCATTGCCGACACTGAATGAAGATGAAGAAGCTGTCGGTATC 565 consensus_11000#1 TGAGATATTACCACAATCCATCTGTTCACGCTATGGGCTGGCTATTGGTGCCTCAGTTGC 598 * * *** * * ** ** ** * * * ** ** * consensus_11000#2 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 146 consensus_11000#3 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 130 consensus_11000#0 ATAACTATGGAGGATGTCATAGAAGAGCTGCTCCAGGAGGAGATATACGATGAGACAGAC 625 consensus_11000#1 TCCATTAGTCCGTGTGCTCGTTTGGGTTTGCTTCCCTGTTGCATATCCGATAAGCAAGCT 658 * ** * ** * **** * **** **** ** ** consensus_11000#2 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 203 consensus_11000#3 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 187 consensus_11000#0 GT---ACATGTTGAAGAACAATGACACATGCCGCAGTCACTTCCCATTTTGAACCAGAAA 682 consensus_11000#1 GCTGGACCATCTGCTTGGTAAAGGT-CATACAGCTCTTTTCCGTAGAGCTGAACTAAAAA 717 * ** ** ** * *** * ** * ***** * *** consensus_11000#2 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 259 consensus_11000#3 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 243 consensus_11000#0 -ATCGGTGCCATACCTTTCTTTTGGCTGAGG---GGAAGTGCCGGGTGCAAATATGTGTT 738 consensus_11000#1 CACTCGTG----ACCCTGCATGGAAATGAGGCTGGGAAAGGTGGGGAGTTAACCCACGAT 773 * *** *** * * * ***** **** * *** * ** * * consensus_11000#2 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 316 consensus_11000#3 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 300 consensus_11000#0 TATATTAGTACGTAATACTGTACTTCAGCGTAGATAGAAACGGGGGTTGAATTGGTT--- 795 consensus_11000#1 GAAACTACTATAATAGCTGGAGCTCTTGAGCTTACTGAAAAGAAAGCTAAAGATGCTATG 833 * * ** ** * * ** * * * **** * * * ** * * consensus_11000#2 -CATTTGAACAGCTGGTACGAA-TAGTAGTGCAGTAGTAGAGAGGGACAAAAGAAAAGAG 374 consensus_11000#3 -CATTTGAACAGCTGGTACGAA-TAGTAGTCCAGTAGTAGAGAGGGACAAAGGGTT-GTG 357 consensus_11000#0 -CATTTGAACAGCTGGTACGAA-TAGTAGTGCAGTAGTAGAGAGGGACAAAGGGTT-GTG 852 consensus_11000#1 ACACCCCTATGTCAAACATTTGCTATTGATATAAATGCAAAGCTTGACAGGGATCTAATG 893 ** * * * ** * * * * * ** **** * consensus_11000#2 TGATTTTGCTTGGTCCTGGGACA--GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 430 consensus_11000#3 TGATTTTGCTTGGTCCTGGGACAC-GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 414 consensus_11000#0 TGATTTTGCTTGGTCCTGGGACA--GTAGGATTGCG--TAGTTATGAAACTGTACTGGTT 908 consensus_11000#1 CAAAAAGTCCTTGACAAAGGTCATAGCAGGGTGCCGGTTTATTATGAGAAGAAGACAAAC 953 * * * * * ** ** * *** * ** * ****** * consensus_11000#2 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCAATGGTG---CTCCT 482 consensus_11000#3 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCA-TGGTG---CTCCT 465 consensus_11000#0 ATCCCGGGATT----TTGACGCGGTAAT-AGTGCCGCTCTGAGTCAATGGTG---CTCCT 960 consensus_11000#1 ATTATTGGATTGATATTGGTGAAGAATTTATTATCCATCAACCCTGATGATGAAATTCCT 1013 ** ***** *** * * * * * * * ** ** ** **** consensus_11000#2 TCGGAAAAAAAAAAAAAGAAAAACTCGAGAC----------------------------- 513 consensus_11000#3 TCGGAAGGCTTCGCTTTCTAAAAAAAAAA------------------------------- 494 consensus_11000#0 TCGGAAGGCTTCGCTTTCTTGTGATGTTGGCCTCACTCGAAGCGTCTGCACAGTAACAAT 1020 consensus_11000#1 ATAAAGAGCGTAACTATCCGCAAAATTCCTCGTGTTTCAGAAGACATGCCCCTCTATGAC 1073 * consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 AAAAAGCATGACAGCCTTATATATTTCTCGAAATCTGGGAAAAATCTCACTCATATGATG 1080 consensus_11000#1 ATCCTAAATGAATTTCAGAAGGGCCACAGTCACATGGCAGTAGTCATAAGACAAACCAAT 1133 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GGAACGAGCGTCTTCAATGAGTGAGCCACATGCGAGAAATCGCTCCCGAGTCCCGGCTCC 1140 consensus_11000#1 GCAAATTATGCAGCTGAACCTCCTGCCAACGACGGTGGAACTCTTGAGGTTGCGATCTCA 1193 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 ATGAGCACTACTCGTCCGGTCAGAACAACATCAAATCGCTTATATACAAACCTGCCGAGA 1200 consensus_11000#1 ATTGATGATAAGCATGGTCAGAAGGTTGTGAAGAATCTTCCCTCCACTAAGAAGATGGAA 1253 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 TTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTACCTGCGCGAGCCGACGCGTCATC 1260 consensus_11000#1 GAGCTGCCCCAAC----------------------------------------------- 1266 consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GGCGCTGGGTCTGGTGGGATAGATTTGCGGCTCCTGGAGATTTTTGAGCTGGCGTGGCTA 1320 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 CCTGCGCGAGCCGACGCCTCATCGGCGCTGGGTCTGGTGGGATTTAATACCCTTTGTTTT 1380 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 CCTCTGAAAAGGAGGAAGAATGCCGTGATAATAGCGCGTAGCCGGCAGGAGATACAAATC 1440 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 CAGAAGAGCATTCTTCGTCATCCTTCATCCTGGTTGTTGTCTGCCATTGTTGTGGTCTAA 1500 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 GCGTATGATCAAATCATTCTAAATAGCTATCTTGTTTTAAATCAAGATGTGATATGTCAT 1560 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ------------------------------------------------------------ consensus_11000#3 ------------------------------------------------------------ consensus_11000#0 TCTAAATACTTCTATCCATTCACAAGAGTAATACCTATTTCATATTTTAGTTTTTTAAAA 1620 consensus_11000#1 ------------------------------------------------------------ consensus_11000#2 ---------------------------------------------------------- consensus_11000#3 ---------------------------------------------------------- consensus_11000#0 CAAGTTGTTTTTATTTGTAGTCTTTTTACACCAAGATTCAAATGAAGAGGTAAATTAA 1678 consensus_11000#1 ---------------------------------------------------------- |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||