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Oryza sativa
cluster # 11004 cluster # 11004       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11004#0 length = 3220 sequences # 1  
consensus_11004#1 length = 1379 sequences # 4  
consensus_11004#2 length = 1164 sequences # 3  

consensusID : consensus_11004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 3220
fasta sequence
                              [GCACTAGTCAATAGGAAACTCGGCGTCACCCCTACCTGGCGCGCCAACTGTCGAAACATGAATTCGGCAATAATAAAAGGGGGTAGCGCACGAGACCTAAAAGTGGATGGATGCGGAGACAAAGATTTAGACAGGTTCAGGCCCTCTCAATGAGAGGTAATACCCTACTCCTGTTTGGGGATTTGAATCCGCCAGGTGTAGTATAGATCTGTCGATCATATGTGCTCATGCCCCCGAGAGGGCCTCCTGCCCACCTTATATAGGATGGGGGGCAGGATTACAAGATAGAAACCTTAACCAATACGGTATCGGTTTTCTAAATCTACTTTACAATCCTATCAAACCAGGACTTTAGGCCGTTCCATAATATACAGGGAAACGTAATACCCAAATCACGATACGTTACATATTTCATAGATATAAGTTATCCCCTATAACTAGTCGGATAACCACACCGTGTGGGTATGGGGTACCCATAATCTCTACAATATGTGATGATGAGATGTGTCATGACTCGCAGATTCACAATTTTTGCAGAACATTTGCTCTTTTTCTCTTAATTAACAATTTGCTGAACAATCTGCTATTTTGCAGCTGCTCCAACTAGTCCATTATGGCAGAAAGTGGAGAGAAAATTTTGAAGGCCCGATGAACATGAGTAGAGCAACACAAATAAGTTCAATGAATTCATAGTACTAACTACACCCCAAGGCCTGATGAACATAGAGCACCCCATATGCTAGTCCTCTCCACTCATCTGTTATCCTTTTTTTATGTCCTAACAGATATAGATAATTACAATTATGCGATGCTCTTTTCACAAAGAGGGCAGCTACCGCACGGGATTCCGTTGCAACGTAGCTGCCACGGGATAAGATCTCCACTACCTTATCTCCTTCCTTTCCCCTCCACAAACTCTCTCTCTCTCACAGGAGAAGAAAACGAGAGGCGGAGATGAAGCTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGACGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCGTCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGTGCCGCCTCCACGCGCTGTGGCGCTGCTTCTTCCACTGGCGCTCTCGTTGCTGCCGGCACCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCAGTGAGCGCAGGTGGCAACTCCTCCGCCGCCACAGAAGCAGAGGAAGCCGGTGGTCTCCTCCTCTCCATCCTGATACTTGGTACCTTGGGTATCAGGTACCTGGTACCTCTGGTACCGTCTGATACATTTGGTACCTGGTACCAGGCTAGTACCTAAAATCTAGTAATGTGATACCTGGTACCTGGTACCTGGTACCCTGGTGCCTGGTACCTGGTACCCGTGATATCTGGTATTTGATACCCGTAATACCTGGTACCTAGTATCCTGGTACCTGGTACCCGTGATACATGGTACCTGATACCCGTGATACCTGGTACCAGTAGCCTGGAGCAGGAGGAGAGAGAGGAGGAGGCAGCCGCGTGGTGGAGCAGGAGAACGAGGCGGTGCGCGAATCTGGTGATCGGCGAGGCGAAGCGTGGAGGAGGCAGTGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACAAGGGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCGGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCACGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCGCACCTGTCGCCATTCTCCTCGTCGTCGCCGCCTCCCCCGCAGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACAGGGACGACGGCGGCCACCGGCTCCGACGAGCGATGGGGCGACAGCGACGGGGACGGGGACGACGGTGGCTGTTGGCTCCGATGATTTAGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGGGATGCCGTGGAATAGATTTTCTATTTCGCAAAACCAATTTTTACGTGCGAATATTCATGATGTAGATTGAGTTACGCCCTCCTCGGAGATGGAATAAATGTTCCGGATCAAGTGAGGAAAGCAGTGGGCGTGAAGACCCCTTGGTCGAGACTTGCAGGTGTGACAAGATCAACAAACCGCTCAAGGCAATGAAGGCATGAATAGCAAGCAACAATGTGCCTCTGCTCTGTCTAGGGATGCAAGCCGCGTGGGCAAGCGGTTTTTTTTTTCCCACTTATTCCACTTCTAGTTCATTTTTTCTTCTAAATTTTGTACTACCATGCGGGAAATAGACTAGCAAGCTGGTTTTTATGCGGGTAGCGGAACTATCCACTTGCATCCCTAGCTCTGTCCCCTCTACATGACGGTGTCTGGATCTTGAGGTCACTAAAATTGCAGAGTCCTGGAACCACATGAAGGACACCTTGGTCATCCTGACTTCAACGGACATAACCCATTTCAGTGGTTATACAAGAGCAGCAACTCTCAATCTGCCATCTGTGATTCCAATAGGACCAAGAAACACTCAAGAAAACATTAAGCAGCTTCTCGCAGGTACACGGAGCCAGAGTTTAGCAATCCCGGTGCCTCCTCCTCTACTGAACCTCCATGCTGCCATGCATGTACAGCTGAGATTGCATTTGACAGCAGAGATCGATCCTCAATGTGCCATTTGACAGCAGAGATCGATCCTCAATGTGCTCAAATTATCGTGATGTGATTTGGTCAAAGCAAGACACATGAGATTTGTTGTTGGATCACAGTACAGATATATAGAGAGGCGCATTATACTCTACAGTACTACTTATCAAGGAGAGATTGTAGTGCTGTTTTGTTGGATCATTAAGTCACAACACAAGTTAACTGATCCAAGCAACCGTTTCTAGACTGAAGAATAGGAGGTTGGGATGATTTCGCCTACTGTTTCTAGTCCTATTTGAGAGAGTTAATGTAACAAGCACGGTGGTATCAATTTCAATAGGTGTAGTTGCATAGATATTCCATATAAATAGGCATATGAAACTACACCACAATATGAACTTACTAAGTCTAACACTGACATTTTTGC]

[+] EMBL AK119810             [GCACTAGTCAATAGGAAACTCGGCGTCACCCCTACCTGGCGCGCCAACTGTCGAAACATGAATTCGGCAATAATAAAAGGGGGTAGCGCACGAGACCTAAAAGTGGATGGATGCGGAGACAAAGATTTAGACAGGTTCAGGCCCTCTCAATGAGAGGTAATACCCTACTCCTGTTTGGGGATTTGAATCCGCCAGGTGTAGTATAGATCTGTCGATCATATGTGCTCATGCCCCCGAGAGGGCCTCCTGCCCACCTTATATAGGATGGGGGGCAGGATTACAAGATAGAAACCTTAACCAATACGGTATCGGTTTTCTAAATCTACTTTACAATCCTATCAAACCAGGACTTTAGGCCGTTCCATAATATACAGGGAAACGTAATACCCAAATCACGATACGTTACATATTTCATAGATATAAGTTATCCCCTATAACTAGTCGGATAACCACACCGTGTGGGTATGGGGTACCCATAATCTCTACAATATGTGATGATGAGATGTGTCATGACTCGCAGATTCACAATTTTTGCAGAACATTTGCTCTTTTTCTCTTAATTAACAATTTGCTGAACAATCTGCTATTTTGCAGCTGCTCCAACTAGTCCATTATGGCAGAAAGTGGAGAGAAAATTTTGAAGGCCCGATGAACATGAGTAGAGCAACACAAATAAGTTCAATGAATTCATAGTACTAACTACACCCCAAGGCCTGATGAACATAGAGCACCCCATATGCTAGTCCTCTCCACTCATCTGTTATCCTTTTTTTATGTCCTAACAGATATAGATAATTACAATTATGCGATGCTCTTTTCACAAAGAGGGCAGCTACCGCACGGGATTCCGTTGCAACGTAGCTGCCACGGGATAAGATCTCCACTACCTTATCTCCTTCCTTTCCCCTCCACAAACTCTCTCTCTCTCACAGGAGAAGAAAACGAGAGGCGGAGATGAAGCTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGACGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCGTCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGTGCCGCCTCCACGCGCTGTGGCGCTGCTTCTTCCACTGGCGCTCTCGTTGCTGCCGGCACCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCAGTGAGCGCAGGTGGCAACTCCTCCGCCGCCACAGAAGCAGAGGAAGCCGGTGGTCTCCTCCTCTCCATCCTGATACTTGGTACCTTGGGTATCAGGTACCTGGTACCTCTGGTACCGTCTGATACATTTGGTACCTGGTACCAGGCTAGTACCTAAAATCTAGTAATGTGATACCTGGTACCTGGTACCTGGTACCCTGGTGCCTGGTACCTGGTACCCGTGATATCTGGTATTTGATACCCGTAATACCTGGTACCTAGTATCCTGGTACCTGGTACCCGTGATACATGGTACCTGATACCCGTGATACCTGGTACCAGTAGCCTGGAGCAGGAGGAGAGAGAGGAGGAGGCAGCCGCGTGGTGGAGCAGGAGAACGAGGCGGTGCGCGAATCTGGTGATCGGCGAGGCGAAGCGTGGAGGAGGCAGTGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACAAGGGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCGGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCACGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCGCACCTGTCGCCATTCTCCTCGTCGTCGCCGCCTCCCCCGCAGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACAGGGACGACGGCGGCCACCGGCTCCGACGAGCGATGGGGCGACAGCGACGGGGACGGGGACGACGGTGGCTGTTGGCTCCGATGATTTAGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGGGATGCCGTGGAATAGATTTTCTATTTCGCAAAACCAATTTTTACGTGCGAATATTCATGATGTAGATTGAGTTACGCCCTCCTCGGAGATGGAATAAATGTTCCGGATCAAGTGAGGAAAGCAGTGGGCGTGAAGACCCCTTGGTCGAGACTTGCAGGTGTGACAAGATCAACAAACCGCTCAAGGCAATGAAGGCATGAATAGCAAGCAACAATGTGCCTCTGCTCTGTCTAGGGATGCAAGCCGCGTGGGCAAGCGGTTTTTTTTTTCCCACTTATTCCACTTCTAGTTCATTTTTTCTTCTAAATTTTGTACTACCATGCGGGAAATAGACTAGCAAGCTGGTTTTTATGCGGGTAGCGGAACTATCCACTTGCATCCCTAGCTCTGTCCCCTCTACATGACGGTGTCTGGATCTTGAGGTCACTAAAATTGCAGAGTCCTGGAACCACATGAAGGACACCTTGGTCATCCTGACTTCAACGGACATAACCCATTTCAGTGGTTATACAAGAGCAGCAACTCTCAATCTGCCATCTGTGATTCCAATAGGACCAAGAAACACTCAAGAAAACATTAAGCAGCTTCTCGCAGGTACACGGAGCCAGAGTTTAGCAATCCCGGTGCCTCCTCCTCTACTGAACCTCCATGCTGCCATGCATGTACAGCTGAGATTGCATTTGACAGCAGAGATCGATCCTCAATGTGCCATTTGACAGCAGAGATCGATCCTCAATGTGCTCAAATTATCGTGATGTGATTTGGTCAAAGCAAGACACATGAGATTTGTTGTTGGATCACAGTACAGATATATAGAGAGGCGCATTATACTCTACAGTACTACTTATCAAGGAGAGATTGTAGTGCTGTTTTGTTGGATCATTAAGTCACAACACAAGTTAACTGATCCAAGCAACCGTTTCTAGACTGAAGAATAGGAGGTTGGGATGATTTCGCCTACTGTTTCTAGTCCTATTTGAGAGAGTTAATGTAACAAGCACGGTGGTATCAATTTCAATAGGTGTAGTTGCATAGATATTCCATATAAATAGGCATATGAAACTACACCACAATATGAACTTACTAAGTCTAACACTGACATTTTTGC]


>consensus_11004#0 GCACTAGTCAATAGGAAACTCGGCGTCACCCCTACCTGGCGCGCCAACTGTCGAAACATG AATTCGGCAATAATAAAAGGGGGTAGCGCACGAGACCTAAAAGTGGATGGATGCGGAGAC AAAGATTTAGACAGGTTCAGGCCCTCTCAATGAGAGGTAATACCCTACTCCTGTTTGGGG ATTTGAATCCGCCAGGTGTAGTATAGATCTGTCGATCATATGTGCTCATGCCCCCGAGAG GGCCTCCTGCCCACCTTATATAGGATGGGGGGCAGGATTACAAGATAGAAACCTTAACCA ATACGGTATCGGTTTTCTAAATCTACTTTACAATCCTATCAAACCAGGACTTTAGGCCGT TCCATAATATACAGGGAAACGTAATACCCAAATCACGATACGTTACATATTTCATAGATA TAAGTTATCCCCTATAACTAGTCGGATAACCACACCGTGTGGGTATGGGGTACCCATAAT CTCTACAATATGTGATGATGAGATGTGTCATGACTCGCAGATTCACAATTTTTGCAGAAC ATTTGCTCTTTTTCTCTTAATTAACAATTTGCTGAACAATCTGCTATTTTGCAGCTGCTC CAACTAGTCCATTATGGCAGAAAGTGGAGAGAAAATTTTGAAGGCCCGATGAACATGAGT AGAGCAACACAAATAAGTTCAATGAATTCATAGTACTAACTACACCCCAAGGCCTGATGA ACATAGAGCACCCCATATGCTAGTCCTCTCCACTCATCTGTTATCCTTTTTTTATGTCCT AACAGATATAGATAATTACAATTATGCGATGCTCTTTTCACAAAGAGGGCAGCTACCGCA CGGGATTCCGTTGCAACGTAGCTGCCACGGGATAAGATCTCCACTACCTTATCTCCTTCC TTTCCCCTCCACAAACTCTCTCTCTCTCACAGGAGAAGAAAACGAGAGGCGGAGATGAAG CTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGACGACGACGGCACGGCG TCGGCGAGGTCGGGGCGGCGTCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCC GCCCGCTGCGGTGCCGCCTCCACGCGCTGTGGCGCTGCTTCTTCCACTGGCGCTCTCGTT GCTGCCGGCACCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCGCCGTCGT CCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCAGTGAGCGCAGGTGGCAACTCCTCCGCCG CCACAGAAGCAGAGGAAGCCGGTGGTCTCCTCCTCTCCATCCTGATACTTGGTACCTTGG GTATCAGGTACCTGGTACCTCTGGTACCGTCTGATACATTTGGTACCTGGTACCAGGCTA GTACCTAAAATCTAGTAATGTGATACCTGGTACCTGGTACCTGGTACCCTGGTGCCTGGT ACCTGGTACCCGTGATATCTGGTATTTGATACCCGTAATACCTGGTACCTAGTATCCTGG TACCTGGTACCCGTGATACATGGTACCTGATACCCGTGATACCTGGTACCAGTAGCCTGG AGCAGGAGGAGAGAGAGGAGGAGGCAGCCGCGTGGTGGAGCAGGAGAACGAGGCGGTGCG CGAATCTGGTGATCGGCGAGGCGAAGCGTGGAGGAGGCAGTGGCGAATCCGGTGGTCGGC GAGGCGGGGCAGCCGATGAGAAGACCGACAAGGGCGGGGAGCCAGAGCGGCGCGGCAAGG GAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCC GGGGTCCTGAGCCAGCGGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCACGCCCCCGCTCC CGCTCTCCCTCTTGTTCACCGCACCTGTCGCCATTCTCCTCGTCGTCGCCGCCTCCCCCG CAGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACAGGGACGACGGCGGCC ACCGGCTCCGACGAGCGATGGGGCGACAGCGACGGGGACGGGGACGACGGTGGCTGTTGG CTCCGATGATTTAGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATC CCGTCTCCACGGGATGCCGTGGAATAGATTTTCTATTTCGCAAAACCAATTTTTACGTGC GAATATTCATGATGTAGATTGAGTTACGCCCTCCTCGGAGATGGAATAAATGTTCCGGAT CAAGTGAGGAAAGCAGTGGGCGTGAAGACCCCTTGGTCGAGACTTGCAGGTGTGACAAGA TCAACAAACCGCTCAAGGCAATGAAGGCATGAATAGCAAGCAACAATGTGCCTCTGCTCT GTCTAGGGATGCAAGCCGCGTGGGCAAGCGGTTTTTTTTTTCCCACTTATTCCACTTCTA GTTCATTTTTTCTTCTAAATTTTGTACTACCATGCGGGAAATAGACTAGCAAGCTGGTTT TTATGCGGGTAGCGGAACTATCCACTTGCATCCCTAGCTCTGTCCCCTCTACATGACGGT GTCTGGATCTTGAGGTCACTAAAATTGCAGAGTCCTGGAACCACATGAAGGACACCTTGG TCATCCTGACTTCAACGGACATAACCCATTTCAGTGGTTATACAAGAGCAGCAACTCTCA ATCTGCCATCTGTGATTCCAATAGGACCAAGAAACACTCAAGAAAACATTAAGCAGCTTC TCGCAGGTACACGGAGCCAGAGTTTAGCAATCCCGGTGCCTCCTCCTCTACTGAACCTCC ATGCTGCCATGCATGTACAGCTGAGATTGCATTTGACAGCAGAGATCGATCCTCAATGTG CCATTTGACAGCAGAGATCGATCCTCAATGTGCTCAAATTATCGTGATGTGATTTGGTCA AAGCAAGACACATGAGATTTGTTGTTGGATCACAGTACAGATATATAGAGAGGCGCATTA TACTCTACAGTACTACTTATCAAGGAGAGATTGTAGTGCTGTTTTGTTGGATCATTAAGT CACAACACAAGTTAACTGATCCAAGCAACCGTTTCTAGACTGAAGAATAGGAGGTTGGGA TGATTTCGCCTACTGTTTCTAGTCCTATTTGAGAGAGTTAATGTAACAAGCACGGTGGTA TCAATTTCAATAGGTGTAGTTGCATAGATATTCCATATAAATAGGCATATGAAACTACAC CACAATATGAACTTACTAAGTCTAACACTGACATTTTTGC



consensusID : consensus_11004#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1379
fasta sequence
                              [CATGGTAACCGTCTTGCTATGTATGTGTACACCAATTTTAATACACGAAAATCCACACATTTTCAACCAATCCGAATCTTCGGAAATGCATCTAGGCAATTTAAATTCAAATTTTGACCAAATCCTTACTAAATTACGTAGAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTACGAGATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCCCTTTCCCTCCACAAACTCTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGACTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCC-TGAGCC-AGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACGACAGTGGCCGCTGGCTCCGACGATTTGGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGCGTCCGCCCACGCGTNCNCT]

[-] EMBL AK107588             [CATGGTAACCGTCTTGCTATGTATGTGTACACCAATTTTAATACACGAAAATCCACACATTTTCAACCAATCCGAATCTTCGGAAATGCATCTAGGCAATTTAAATTCAAATTTTGACCAAATCCTTACTAAATTACGTAGAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTACGAGATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCCCTTTCCCTCCACAAACTCTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGACTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCC TGAGCC AGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACGACAGTGGCCGCTGGCTCCGACGATTTGGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCA                      ]
[+] EMBL CB684405             [                                                                  CCAATCCGAATCTTCGGAAATGCATCTAGGCCATTTAAATTCAAATTTTGACCAAATCCTTACTAAATTACGTAGAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTACGAGATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCCCTTTCCCTCCACAAACTCTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGACTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL AU166766             [                                                                                                    tttttTTCAAATTTTGACCAAATCCTTACTAAATTACGTANAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTACGAGATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCCCTTTCCCTCCACAAACTCTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTTTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL C91809               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTCGTCGTCCTCCTCGGCGGCCGGGGTCCTTNAGCCAAGCAACGGCTTCCCCGGCGCCGGCAACGGCCTCCGCGCCCNC NTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGC GCGNTGNCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACGACAGTGNCCGCTGGCTCCGACGATTTGGGGGAGAAGAGTGAGGTAGGAGGAGNGGATCGATCCGGATTACTATCCCGTCCCCACGCGTCCGCCCACGCGTNCNCT]


>consensus_11004#1 CATGGTAACCGTCTTGCTATGTATGTGTACACCAATTTTAATACACGAAAATCCACACAT TTTCAACCAATCCGAATCTTCGGAAATGCATCTAGGCAATTTAAATTCAAATTTTGACCA AATCCTTACTAAATTACGTAGAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTACGAG ATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCCCTTT CCCTCCACAAACTCTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAG GAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAG GTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTG CGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGG CGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCC GCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAA GCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCT GGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGT ACCTTTGGTACCGACTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGT ACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTA GCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAG CGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACC GACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGC CGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCAGCGGCTTCC CCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCC GTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAG CGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGA CAGCGACGGGGACGACAGTGGCCGCTGGCTCCGACGATTTGGGGGAGAAGAGTGAGGTAG GAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGCGTCCGCCCACGCGTNCNCT



consensusID : consensus_11004#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1164
fasta sequence
                              [CTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCT-GCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGAC-TGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACGACAGTGGCCGCTGGCTCCGACGATTTGGGGGGGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGGGATGTCGTGGAATAGATTTTCTGAACCAAGATATATGCTGTGATGGACTCTGTCCGA]

[+] EMBL AK108744             [CTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCT GCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGAC TGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACGACAGTGGCCGCTGGCTCCGACGATTTGGGGGGGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATCCCGTCTCCACGGGATGTCGTGGAATAGATTTTCTGAACCAAGATATATGCTGTGATGGACTCTGTCCGA]
[+] EMBL AU163553             [                               AGATGAAGTNGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGC TCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCNCGCTNGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL AU166765             [                                                                                                                                                                                                                                                                                                                                                                                               TGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCTCCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCGACTTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGTGATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAG                                                                                                                                                                                                                                                                                                                                                                ]


>consensus_11004#2 CTCTCACACAGGAGAAGAAAACGAGAGGCGGAGATGAAGTTGGCCAGGAGGAAGGGGTCG TCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCGTCGGCGAGGTCGGGGCGGCAT CGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCCGCCCGCTGCGGCGCCGCCTCC GCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTCGCTGCCGGCGCCGGGGCCTCT CCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGTCCTTGCCCGCTGCTCCCGCCG CCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCGCTACAGAAGCAGAAGAATCTG GCGATCTCGGTGTCTCGGTCACTGCAACGCCGGCGGCAACATGCTCTGGAACCTCTACCT CCTCTCCATCCTGATACCTGGTACCTTGGTATCAGTCGGTACCAGGTACCTTTGGTACCG ACTGATACCTTTGGTACCTGGTACCAGGCTAGTACCTAGTATCTGGTACCGGGTACCCGT GATATCTAGTACCTGGTGGCCTGGAGGAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGA GCAGGAGAAGGAGGTGGCGCGCGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCA GCGGCGAATCCGGTGGTCGGCGAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGG AGCCAGAGCGGCGCGGCAAGGGAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCG TCGTCGTCCTCCTCGGCGGCCGGGGTCCTGAGCCAGCAGCGGCTTCCCCGGCGCCGGCAG CGGCCTCCGCGCCCCCGCTCCCGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCC TCGTCGTCGCCGCCTCCCCCGCGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACG GCGACGGGGACGACGGCGGCCACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGAC GACAGTGGCCGCTGGCTCCGACGATTTGGGGGGGAAGAGTGAGGTAGGAGGAGGGGATCG ATCCGGATTACTATCCCGTCTCCACGGGATGTCGTGGAATAGATTTTCTGAACCAAGATA TATGCTGTGATGGACTCTGTCCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      GCACTAGTCAATAGGAAACTCGGCGTCACCCCTACCTGGCGCGCCAACTGTCGAAACATG 60
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      AATTCGGCAATAATAAAAGGGGGTAGCGCACGAGACCTAAAAGTGGATGGATGCGGAGAC 120
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      AAAGATTTAGACAGGTTCAGGCCCTCTCAATGAGAGGTAATACCCTACTCCTGTTTGGGG 180
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ATTTGAATCCGCCAGGTGTAGTATAGATCTGTCGATCATATGTGCTCATGCCCCCGAGAG 240
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      GGCCTCCTGCCCACCTTATATAGGATGGGGGGCAGGATTACAAGATAGAAACCTTAACCA 300
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ATACGGTATCGGTTTTCTAAATCTACTTTACAATCCTATCAAACCAGGACTTTAGGCCGT 360
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TCCATAATATACAGGGAAACGTAATACCCAAATCACGATACGTTACATATTTCATAGATA 420
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TAAGTTATCCCCTATAACTAGTCGGATAACCACACCGTGTGGGTATGGGGTACCCATAAT 480
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CTCTACAATATGTGATGATGAGATGTGTCATGACTCGCAGATTCACAATTTTTGCAGAAC 540
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ATTTGCTCTTTTTCTCTTAATTAACAATTTGCTGAACAATCTGCTATTTTGCAGCTGCTC 600
                                                                                   

consensus_11004#1      --------------------------------------------------CATGGTAACC 10
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CAACTAGTCCATTATGGCAGAAAGTGGAGAGAAAATTTTGAAGGCCCGATGAACATGAGT 660
                                                                                   

consensus_11004#1      GTCTTGCTATGTATGTGTACACCAATTTTAATACACGAAA-ATCCACACATTTTCAACCA 69
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      AGAGCAACACAAATAAGTTCAATGAATTCATAGTACTAACTACACCCCAAGGCCTGATGA 720
                                                                                   

consensus_11004#1      ATCCGAATCTTCGGAAATGC--ATCTAGGCAATTTAAAT-TCAAATTTTGACCAAATCCT 126
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ACATAGAGCACCCCATATGCTAGTCCTCTCCACTCATCTGTTATCCTTTTTTTATGTCCT 780
                                                                                   

consensus_11004#1      TACTAA--------ATTACG--TAGAAAATGCTTATTTTTGGAAGAGGGCAGCTACCGTA 176
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      AACAGATATAGATAATTACAATTATGCGATGCTCTTTTCACAAAGAGGGCAGCTACCGCA 840
                                                                                   

consensus_11004#1      CGAGATTCCGTTGCAACGTAGCAGCCACGGGATAAGATCTCCACTACCTTGTCTCCTTCC 236
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CGGGATTCCGTTGCAACGTAGCTGCCACGGGATAAGATCTCCACTACCTTATCTCCTTCC 900
                                                                                   

consensus_11004#1      CTTTCCCTCCACAAACTCTCTCAC----ACAGGAGAAGAAAACGAGAGGCGGAGATGAAG 292
consensus_11004#2      -----------------CTCTCAC----ACAGGAGAAGAAAACGAGAGGCGGAGATGAAG 39
consensus_11004#0      TTTCCCCTCCACAAACTCTCTCTCTCTCACAGGAGAAGAAAACGAGAGGCGGAGATGAAG 960
                                        ***** *    ********************************

consensus_11004#1      TTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCG 352
consensus_11004#2      TTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGATGACGACGGCACGGCG 99
consensus_11004#0      CTGGCCAGGAGGAAGGGGTCGTCGTCGTCTCCGGCGGCCGTGGACGACGACGGCACGGCG 1020
                        ******************************************* ***************

consensus_11004#1      TCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCC 412
consensus_11004#2      TCGGCGAGGTCGGGGCGGCATCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCC 159
consensus_11004#0      TCGGCGAGGTCGGGGCGGCGTCGAGGGTGATCTCGCCGCACCTCCACGACGTCGTCCTCC 1080
                       ******************* ****************************************

consensus_11004#1      GCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTC 472
consensus_11004#2      GCCCGCTGCGGCGCCGCCTCCGCGCGCTGTGGCACTGCTTCTTCCACTGGCGCTCTCGTC 219
consensus_11004#0      GCCCGCTGCGGTGCCGCCTCCACGCGCTGTGGCGCTGCTTCTTCCACTGGCGCTCTCGTT 1140
                       *********** ********* *********** ************************* 

consensus_11004#1      GCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGT 532
consensus_11004#2      GCTGCCGGCGCCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTTGCCAAGGTCGCCGTCGT 279
consensus_11004#0      GCTGCCGGCACCGGGGCCTCTCCCCTCCTCCCTCGCGCTCCTCGCCAAGGTCGCCGTCGT 1200
                       ********* ******************************** *****************

consensus_11004#1      CCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCG 592
consensus_11004#2      CCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCGGTGAGCGTAGGTGGCTCCTCCTCCGCCG 339
consensus_11004#0      CCTTGCCCGCTGCTCCCGCCGCCTCCTTGCCAGTGAGCGCAGGTGGCAACTCCTCCGCCG 1260
                       ******************************* ******* *******  ***********

consensus_11004#1      CTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCA----ACGCCGGCG 648
consensus_11004#2      CTACAGAAGCAGAAGAATCTGGCGATCTCGGTGTCTCGGTCACTGCA----ACGCCGGCG 395
consensus_11004#0      CCACAGAAGCAGAGGAAGCCGGTGGTCTCCTCCTCTCCATCCTGATACTTGGTACCTTGG 1320
                       * *********** *** * ** * ****    ****  **     *       **   *

consensus_11004#1      GCAACATGC-TCTGGAACCTCTACCTCCTCTCCATCC---TGATACCTGGTACC---TTG 701
consensus_11004#2      GCAACATGC-TCTGGAACCTCTACCTCCTCTCCATCC---TGATACCTGGTACC---TTG 448
consensus_11004#0      GTATCAGGTACCTGGTACCTCTGGTACCGTCTGATACATTTGGTACCTGGTACCAGGCTA 1380
                       * * ** *   **** ******    **     ** *   ** ***********    * 

consensus_11004#1      GTATC-------------------AGTCGGTACCAGGTACCT------TTGGTACCGA-- 734
consensus_11004#2      GTATC-------------------AGTCGGTACCAGGTACCT------TTGGTACCGA-- 481
consensus_11004#0      GTACCTAAAATCTAGTAATGTGATACCTGGTACCTGGTACCTGGTACCCTGGTGCCTGGT 1440
                       *** *                   *   ****** *******       **** **    

consensus_11004#1      --CTGATACCTTTGGTACCTGGTACCAGG------------CTAGTACCTAGTATC-TGG 779
consensus_11004#2      --CTGATACCTTTGGTACCTGGTACCAGG------------CTAGTACCTAGTATC-TGG 526
consensus_11004#0      ACCTGGTACCCGTGATATCTGGTATTTGATACCCGTAATACCTGGTACCTAGTATCCTGG 1500
                         *** ****  ** ** ******   *             ** ************ ***

consensus_11004#1      TACCGGGTACCCGTGATATCTAGTACCTG----------------------GTGGCCTGG 817
consensus_11004#2      TACCGGGTACCCGTGATATCTAGTACCTG----------------------GTGGCCTGG 564
consensus_11004#0      TACCTGGTACCCGTGATACATGGTACCTGATACCCGTGATACCTGGTACCAGTAGCCTGG 1560
                       **** *************  * *******                      ** ******

consensus_11004#1      AG---GAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCG 874
consensus_11004#2      AG---GAGGAGAGAGAGGAGGAGGTAGCCGCGTGGTGGAGCAGGAGAAGGAGGTGGCGCG 621
consensus_11004#0      AGCAGGAGGAGAGAGAGGAGGAGGCAGCCGCGTGGTGGAGCAGGAGAACGAGGCGGTGCG 1620
                       **   ******************* *********************** **** ** ***

consensus_11004#1      CGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGC 934
consensus_11004#2      CGAATCCGGTGGTCGGCGAGGCGAAGCGTGGAGGAGGCAGCGGCGAATCCGGTGGTCGGC 681
consensus_11004#0      CGAATCTGGTGATCGGCGAGGCGAAGCGTGGAGGAGGCAGTGGCGAATCCGGTGGTCGGC 1680
                       ****** **** **************************** *******************

consensus_11004#1      GAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGG 994
consensus_11004#2      GAGGCGGGGCAGCCGATGAGAAGACCGACGAGAGCGGGGAGCCAGAGCGGCGCGGCAAGG 741
consensus_11004#0      GAGGCGGGGCAGCCGATGAGAAGACCGACAAGGGCGGGGAGCCAGAGCGGCGCGGCAAGG 1740
                       ***************************** ** ***************************

consensus_11004#1      GAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCC 1054
consensus_11004#2      GAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCC 801
consensus_11004#0      GAGGCGAGCTTGAGGGCGACCCTTGCCGAGGCCGCGCCGTCGTCGTCCTCCTCGGCGGCC 1800
                       ************************************************************

consensus_11004#1      GGGGTCCTGAGCCAGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCC 1114
consensus_11004#2      GGGGTCCTGAGCCAGCAGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCGCGCCCCCGCTCC 861
consensus_11004#0      GGGGTCCTGAGCCAGCGGCGGCTTCCCCGGCGCCGGCAGCGGCCTCCACGCCCCCGCTCC 1860
                       **************** ****************************** ************

consensus_11004#1      CGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCG 1174
consensus_11004#2      CGCTCTCCCTCTTGTTCACCTCACCCGTCGCCAAGCTCCTCGTCGTCGCCGCCTCCCCCG 921
consensus_11004#0      CGCTCTCCCTCTTGTTCACCGCACCTGTCGCCATTCTCCTCGTCGTCGCCGCCTCCCCCG 1920
                       ******************** **** *******  *************************

consensus_11004#1      CGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCC 1234
consensus_11004#2      CGGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACGGGGACGACGGCGGCC 981
consensus_11004#0      CAGCGGTGGCCGCCGGCTCCGACGAGCGGTGGGGCGACGGCGACAGGGACGACGGCGGCC 1980
                       * ****************************************** ***************

consensus_11004#1      ACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACG------ACAGTGGCCGCTGG 1288
consensus_11004#2      ACCGGCTCCGACGAGCGGTGGGGCGACAGCGACGGGGACG------ACAGTGGCCGCTGG 1035
consensus_11004#0      ACCGGCTCCGACGAGCGATGGGGCGACAGCGACGGGGACGGGGACGACGGTGGCTGTTGG 2040
                       ***************** **********************      ** ***** * ***

consensus_11004#1      CTCCGACGATTTGGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATC 1348
consensus_11004#2      CTCCGACGATTTGGGGGGGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATC 1095
consensus_11004#0      CTCCGATGATTTAGGGGAGAAGAGTGAGGTAGGAGGAGGGGATCGATCCGGATTACTATC 2100
                       ****** ***** **** ******************************************

consensus_11004#1      CCGTCTCCACG---CGTCCGCCCACGCGTNCNCT-------------------------- 1379
consensus_11004#2      CCGTCTCCACGGGATGTCGTGGAATAGATTTTCTGAACCAAGATATATGCTGTGATGGAC 1155
consensus_11004#0      CCGTCTCCACGGGATGCCGTGGAATAGATTTTCTATTTCGCAAAACCAATTTTTACGTGC 2160
                       ***********    * *     *    *   **                          

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      TCTGTCCGA--------------------------------------------------- 1164
consensus_11004#0      GAATATTCATGATGTAGATTGAGTTACGCCCTCCTCGGAGATGGAATAAATGTTCCGGAT 2220
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CAAGTGAGGAAAGCAGTGGGCGTGAAGACCCCTTGGTCGAGACTTGCAGGTGTGACAAGA 2280
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TCAACAAACCGCTCAAGGCAATGAAGGCATGAATAGCAAGCAACAATGTGCCTCTGCTCT 2340
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      GTCTAGGGATGCAAGCCGCGTGGGCAAGCGGTTTTTTTTTTCCCACTTATTCCACTTCTA 2400
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      GTTCATTTTTTCTTCTAAATTTTGTACTACCATGCGGGAAATAGACTAGCAAGCTGGTTT 2460
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TTATGCGGGTAGCGGAACTATCCACTTGCATCCCTAGCTCTGTCCCCTCTACATGACGGT 2520
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      GTCTGGATCTTGAGGTCACTAAAATTGCAGAGTCCTGGAACCACATGAAGGACACCTTGG 2580
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TCATCCTGACTTCAACGGACATAACCCATTTCAGTGGTTATACAAGAGCAGCAACTCTCA 2640
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ATCTGCCATCTGTGATTCCAATAGGACCAAGAAACACTCAAGAAAACATTAAGCAGCTTC 2700
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TCGCAGGTACACGGAGCCAGAGTTTAGCAATCCCGGTGCCTCCTCCTCTACTGAACCTCC 2760
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      ATGCTGCCATGCATGTACAGCTGAGATTGCATTTGACAGCAGAGATCGATCCTCAATGTG 2820
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CCATTTGACAGCAGAGATCGATCCTCAATGTGCTCAAATTATCGTGATGTGATTTGGTCA 2880
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      AAGCAAGACACATGAGATTTGTTGTTGGATCACAGTACAGATATATAGAGAGGCGCATTA 2940
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TACTCTACAGTACTACTTATCAAGGAGAGATTGTAGTGCTGTTTTGTTGGATCATTAAGT 3000
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      CACAACACAAGTTAACTGATCCAAGCAACCGTTTCTAGACTGAAGAATAGGAGGTTGGGA 3060
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TGATTTCGCCTACTGTTTCTAGTCCTATTTGAGAGAGTTAATGTAACAAGCACGGTGGTA 3120
                                                                                   

consensus_11004#1      ------------------------------------------------------------
consensus_11004#2      ------------------------------------------------------------
consensus_11004#0      TCAATTTCAATAGGTGTAGTTGCATAGATATTCCATATAAATAGGCATATGAAACTACAC 3180
                                                                                   

consensus_11004#1      ----------------------------------------
consensus_11004#2      ----------------------------------------
consensus_11004#0      CACAATATGAACTTACTAAGTCTAACACTGACATTTTTGC 3220
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)