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Oryza sativa
cluster # 11009 cluster # 11009       Sequences # 8       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11009#0 length = 1731 sequences # 7  
consensus_11009#1 length = 576 sequences # 1  

consensusID : consensus_11009#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1731
fasta sequence
                              [GGGATTTTTCCTCGCAACCAACCAAACCAACCAAACCCCCAACCAAGCGAGCAAGCCGCCTTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGACTGATCCCGCCGCCGTAGGAGGAGGAGGAGG-AGGTGGTGGTGGTGGTGGTGATGGAGGGGGGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGACCCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGCTTCGTCGTCGCCAACCAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCGTGCGACAGCTCAACACCTATGGCTTTAGGAAAGTAGATCCAGAACAATGGGAATTTGCAAATGAGGATTTCATAAAAGGACAGCGGCACCGGTTGAAAAATATACATAGACGCAAACCTATATTCAGCCATTCATCACACAGTCAGGGTGCTGGACCATTAACAGATAATGAAAGGAAAGACTATGAGGAAGAAATCGAGAGGCTCAAATCCGATAATGCAGCACTGTCCTCAGAGCTTCAAAATAATACGTTGAAGAAACTTAATATGGAGAAACGAATGCAGGCTTTGGAAGAGAAGCTATTTGTTGTGGAAGATCAGCAGAGGAGTCTGATATCATACGTCAGAGAGATTGTAAAGGCACCAGGATTTCTTTCTAGCTTTGTACAGCAACAAGATCATCACAGGAAGAAGAGGAGACTGCCAATACCAATCTCCTTCCATGAGGATGCAAATACTCAGGAGAACCAGATCATGCCTTGTGACTTGACCAACTCACCAGCTCAGACATTTTACAGAGAATCATTTGACAAGATGGAATCATCCTTGAACTCATTAGAAAATTTCCTTCGAGAAGCAAGTGAAGAATTTGGTAATGATATTTCATATGATGATGGTGTCCCAGGCCCTTCTTCAACTGTTGTTCTCACAGAGCTCCATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCGTCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCTACCAGCTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCATGTACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCC-ATTGACACTTTCTGATATCATTGTGCGTGATTTCTAAAATATTCTCAAGTTTGGTTAAATGTTACAAAAA]

[+] EMBL AK109856             [GGGATTTTTCCTCGCAACCAACCAAACCAACCAAACCCCCAACCAAGCGAGCAAGCCGCCTTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGACTGATCCCGCCGCCGTAGGAGGAGGAGGAGG AGGTGGTGGTGGTGGTGGTGATGGAGGGGGGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGACCCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGCTTCGTCGTCGCCAACCAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCGTGCGACAGCTCAACACCTATGGCTTTAGGAAAGTAGATCCAGAACAATGGGAATTTGCAAATGAGGATTTCATAAAAGGACAGCGGCACCGGTTGAAAAATATACATAGACGCAAACCTATATTCAGCCATTCATCACACAGTCAGGGTGCTGGACCATTAACAGATAATGAAAGGAAAGACTATGAGGAAGAAATCGAGAGGCTCAAATCCGATAATGCAGCACTGTCCTCAGAGCTTCAAAATAATACGTTGAAGAAACTTAATATGGAGAAACGAATGCAGGCTTTGGAAGAGAAGCTATTTGTTGTGGAAGATCAGCAGAGGAGTCTGATATCATACGTCAGAGAGATTGTAAAGGCACCAGGATTTCTTTCTAGCTTTGTACAGCAACAAGATCATCACAGGAAGAAGAGGAGACTGCCAATACCAATCTCCTTCCATGAGGATGCAAATACTCAGGAGAACCAGATCATGCCTTGTGACTTGACCAACTCACCAGCTCAGACATTTTACAGAGAATCATTTGACAAGATGGAATCATCCTTGAACTCATTAGAAAATTTCCTTCGAGAAGCAAGTGAAGAATTTGGTAATGATATTTCATATGATGATGGTGTCCCAGGCCCTTCTTCAACTGTTGTTCTCACAGAGCTCCATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCGTCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCTACCAGCTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCATGTACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCC ATTGACACTTTCTGATATCATTGTGCGTGATTTCTAAAATATTCTCAAGTTTGGT               ]
[+] EMBL C73168               [                   AACCAAACCAACCAAACCCCCAACCAAGCGAGCAAGCCGCCTTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGACTGATCCCGCCGCCGTAGGAGGAGGAGGAGG AGGTGGTGGTGGTGGTGGTGATGGAGGGGGGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGACCCGTCGACGGACGCGGTGGTGGGGTGGACG CCGCCGGCACCAGCTTCGTCGTCGCCAACCAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCGTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL C26146               [                                                        CGCCTTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGACTGATCCCGCCGCCGTA GAGGAGGAGGAGGNGGGTGGTGGTGGTGGTGGTGATGGAGGGGGNCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAAATGGTGGACGACCCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGTTTCGTCGTCGCCAACCAGCCCGAGTTCTTCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTTCAGCTTCGTGCGACAATTCAACAACTATGGCTTTAGGAAAGTAGATTCAGAACAATTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AY344491             [                                                                                         AACCCTAGCCCTCCGATCACCGGCGCTGAGACTGATCCCGCCGCCGTAGGAGGAGGAGGAGG AGGTGGTGGTGGTGGTGGTGATGGAGGGGGGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGACCCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGCTTCGTCGTCGCCAACCAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGCTTCGTGCGACAGCTCAACACCTATGGCTTTAGGAAAGTAGATCCAGAACAATGGGAATTTGCAAATGAGGATTTCATAAAAGGACAGCGGCACCGGTTGAAAAATATACATAGACGCAAACCTATATTCAGCCATTCATCACACAGTCAGGGTGCTGGACCATTAACAGATAATGAAAGGAAAGACTATGAGGAAGAAATCGAGAGGCTCAAATCCGATAATGCAGCACTGTCCTCAGAGCTTCAAAATAATACGTTGAAGAAACTTAATATGGAGAAACGAATGCAGGCTTTGGAAGAGAAGCTATTTGTTGTGGAAGATCAGCAGAGGAGTCTGATATCATACGTCAGAGAGATTGTAAAGGCACCAGGATTTCTTTCTAGCTTTGTACAGCAACAAGATCATCACAGGAAGAAGAGGAGACTGCCAATACCAATCTCCTTCCATGAGGATGCAAATACTCAGGAGAACCAGATCATGCCTTGTGACTTGACCAACTCACCAGCTCAGACATTTTACAGAGAATCATTTGACAAGATGGAATCATCCTTGAACTCATTAGAAAATTTCCTTCGAGAAGCAAGTGAAGAATTTGGTAATGATATTTCATATGATGATGGTGTCCCAGGCCCTTCTTCAACTGTTGTTCTCACAGAGCTCCATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCGTCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCTACCAGCTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCA                                                                                                                  ]
[-] EMBL CB618619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATTTGGTAAAGATATTTCATATGATGATGGTGTCACAGGCCCTTCTTCAACTGTTGTTATCACAGAGCTCCATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCGTCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCCACCAGCTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTGTCGTGTAGATACACGAGCGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTACAGAAAATGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCTGCTGTCACACCTGGTGCAAATGATGGCTTGTGGCAGCAGTTTCTTACCGAGCAGCTTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGGGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGCCTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTAAGGACCGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATATATTTCGCAGTGTACCGTATTTTTTCCATCATGTACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCC ATTGACACTTTCTGATATCATTGTGC                                            ]
[-] EMBL CB618621             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TGATGATGGTGTCCCAGGCCCTTTTTCAACTGTTGTTCTCACAGAGCTCCATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCGTCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCCACCAGCTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTAAGGAACGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATCTATTTGGCAGTGTACCGTATTTTTTCCATCATGTACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCCTAAAGGGACTTTCTGATATCATTG                                               ]
[+] EMBL AU166369             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATTTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTTCCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCATGTACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCC ATTGACACTTTCTGATATCATTGTGCGTGATTTCTAAAATATTCTCAAGTTTGGTTAAATGTTACAAAAA]


>consensus_11009#0 GGGATTTTTCCTCGCAACCAACCAAACCAACCAAACCCCCAACCAAGCGAGCAAGCCGCC TTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGA CTGATCCCGCCGCCGTAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGATGGAGGGG GGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGAC CCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGCTTCGTCGTCGCCAAC CAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGC TTCGTGCGACAGCTCAACACCTATGGCTTTAGGAAAGTAGATCCAGAACAATGGGAATTT GCAAATGAGGATTTCATAAAAGGACAGCGGCACCGGTTGAAAAATATACATAGACGCAAA CCTATATTCAGCCATTCATCACACAGTCAGGGTGCTGGACCATTAACAGATAATGAAAGG AAAGACTATGAGGAAGAAATCGAGAGGCTCAAATCCGATAATGCAGCACTGTCCTCAGAG CTTCAAAATAATACGTTGAAGAAACTTAATATGGAGAAACGAATGCAGGCTTTGGAAGAG AAGCTATTTGTTGTGGAAGATCAGCAGAGGAGTCTGATATCATACGTCAGAGAGATTGTA AAGGCACCAGGATTTCTTTCTAGCTTTGTACAGCAACAAGATCATCACAGGAAGAAGAGG AGACTGCCAATACCAATCTCCTTCCATGAGGATGCAAATACTCAGGAGAACCAGATCATG CCTTGTGACTTGACCAACTCACCAGCTCAGACATTTTACAGAGAATCATTTGACAAGATG GAATCATCCTTGAACTCATTAGAAAATTTCCTTCGAGAAGCAAGTGAAGAATTTGGTAAT GATATTTCATATGATGATGGTGTCCCAGGCCCTTCTTCAACTGTTGTTCTCACAGAGCTC CATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCG TCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCTACCAGCTGTGCA GAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAA ATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCT GAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACC GAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGA AACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAAC GTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAAT TTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTT CCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCATG TACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCCATTGACACTTTCTGATATC ATTGTGCGTGATTTCTAAAATATTCTCAAGTTTGGTTAAATGTTACAAAAA



consensusID : consensus_11009#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 576
fasta sequence
                              [ATTCGCACTCCTCTGGTGATGTAGCAGAGTCCACCAGTTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGGGTAGATACACGAGGGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTGCAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCGGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATCTTGCTTTTCTTCCCGCGTCCATCACCACCACCACCACCACCTCCTCCTCCTCCTCCTACGGCGGCGGGATCAGTCTCAGCGCCGGTGATCGGAGGGCTAGGGTTGCCGTCAGGGTCGGGGCCCCCCCGGCGAAGGCGGCTTGCTCGCTTGGTTGGGGGTTTGGGGGGTTTG]

[-] EMBL CB618620             [ATTCGCACTCCTCTGGTGATGTAGCAGAGTCCACCAGTTGTGCAGAAAGTCCTCCTATTCCTCAAATGCATTCTCGGGTAGATACACGAGGGAAGGTTTCTGAAATAGATGTTAATTCAGAACCTGCTGTTGCAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCGGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGATGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATCTTGCTTTTCTTCCCGCGTCCATCACCACCACCACCACCACCTCCTCCTCCTCCTCCTACGGCGGCGGGATCAGTCTCAGCGCCGGTGATCGGAGGGCTAGGGTTGCCGTCAGGGTCGGGGCCCCCCCGGCGAAGGCGGCTTGCTCGCTTGGTTGGGGGTTTGGGGGGTTTG]


>consensus_11009#1 ATTCGCACTCCTCTGGTGATGTAGCAGAGTCCACCAGTTGTGCAGAAAGTCCTCCTATTC CTCAAATGCATTCTCGGGTAGATACACGAGGGAAGGTTTCTGAAATAGATGTTAATTCAG AACCTGCTGTTGCAGAAACTGGTCCATCAAGAGATCAACCTGCTGAAGAGCCTCCGGCTG TCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACCGAGCAGCCTGGATCAT CAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGAAACAAGGTGGATGAGA TGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAACGTTGAGCAGATAACAG AAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAATCTTGCTTTTCTTCCCG CGTCCATCACCACCACCACCACCACCTCCTCCTCCTCCTCCTACGGCGGCGGGATCAGTC TCAGCGCCGGTGATCGGAGGGCTAGGGTTGCCGTCAGGGTCGGGGCCCCCCCGGCGAAGG CGGCTTGCTCGCTTGGTTGGGGGTTTGGGGGGTTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11009#0      GGGATTTTTCCTCGCAACCAACCAAACCAACCAAACCCCCAACCAAGCGAGCAAGCCGCC 60
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      TTCGCCGGGGGGGCCCCCACCCTGACGGCAACCCTAGCCCTCCGATCACCGGCGCTGAGA 120
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CTGATCCCGCCGCCGTAGGAGGAGGAGGAGGAGGTGGTGGTGGTGGTGGTGATGGAGGGG 180
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      GGCGGCGGGGGCGGGTCGCTGCCGCCGTTCCTGAGCAAGACGTACGAGATGGTGGACGAC 240
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CCGTCGACGGACGCGGTGGTGGGGTGGACGCCCGCCGGCACCAGCTTCGTCGTCGCCAAC 300
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CAGCCCGAGTTCTGCCGGGATCTGCTCCCCAAGTACTTCAAGCACAACAACTTCTCCAGC 360
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      TTCGTGCGACAGCTCAACACCTATGGCTTTAGGAAAGTAGATCCAGAACAATGGGAATTT 420
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      GCAAATGAGGATTTCATAAAAGGACAGCGGCACCGGTTGAAAAATATACATAGACGCAAA 480
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CCTATATTCAGCCATTCATCACACAGTCAGGGTGCTGGACCATTAACAGATAATGAAAGG 540
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      AAAGACTATGAGGAAGAAATCGAGAGGCTCAAATCCGATAATGCAGCACTGTCCTCAGAG 600
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CTTCAAAATAATACGTTGAAGAAACTTAATATGGAGAAACGAATGCAGGCTTTGGAAGAG 660
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      AAGCTATTTGTTGTGGAAGATCAGCAGAGGAGTCTGATATCATACGTCAGAGAGATTGTA 720
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      AAGGCACCAGGATTTCTTTCTAGCTTTGTACAGCAACAAGATCATCACAGGAAGAAGAGG 780
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      AGACTGCCAATACCAATCTCCTTCCATGAGGATGCAAATACTCAGGAGAACCAGATCATG 840
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CCTTGTGACTTGACCAACTCACCAGCTCAGACATTTTACAGAGAATCATTTGACAAGATG 900
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      GAATCATCCTTGAACTCATTAGAAAATTTCCTTCGAGAAGCAAGTGAAGAATTTGGTAAT 960
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      GATATTTCATATGATGATGGTGTCCCAGGCCCTTCTTCAACTGTTGTTCTCACAGAGCTC 1020
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      CATTCACCTGGTGAAAGTGATCCCCGTGTTTCATCACCTCCAACAAGGATGCGTACTTCG 1080
consensus_11009#1      ------------------------------------------------------------
                                                                                   

consensus_11009#0      TCAGCTGGTGCAGGAGATTCGCACTCCTCTCGTGATGTAGCAGAGTCTACCAGCTGTGCA 1140
consensus_11009#1      ----------------ATTCGCACTCCTCTGGTGATGTAGCAGAGTCCACCAGTTGTGCA 44
                                       ************** **************** ***** ******

consensus_11009#0      GAAAGTCCTCCTATTCCTCAAATGCATTCTCGTGTAGATACACGAGCGAAGGTTTCTGAA 1200
consensus_11009#1      GAAAGTCCTCCTATTCCTCAAATGCATTCTCGGGTAGATACACGAGGGAAGGTTTCTGAA 104
                       ******************************** ************* *************

consensus_11009#0      ATAGATGTTAATTCAGAACCTGCTGTTACAGAAACTGGTCCATCAAGAGATCAACCTGCT 1260
consensus_11009#1      ATAGATGTTAATTCAGAACCTGCTGTTGCAGAAACTGGTCCATCAAGAGATCAACCTGCT 164
                       *************************** ********************************

consensus_11009#0      GAAGAGCCTCCTGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACC 1320
consensus_11009#1      GAAGAGCCTCCGGCTGTCACACCTGGTGCAAACGATGGCTTCTGGCAGCAGTTTCTTACC 224
                       *********** ************************************************

consensus_11009#0      GAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGA 1380
consensus_11009#1      GAGCAGCCTGGATCATCAGATGCACATCAGGAGGCTCAATCAGAACGGCGAGATGGAGGA 284
                       ************************************************************

consensus_11009#0      AACAAGGTGGATGAGATGAAATCAGGAGATCGACAACATCTTTGGTGGGGCAAAAGGAAC 1440
consensus_11009#1      AACAAGGTGGATGAGATGAAATCAGGAGATCGACAGCATCTTTGGTGGGGCAAAAGGAAC 344
                       *********************************** ************************

consensus_11009#0      GTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAAT 1500
consensus_11009#1      GTTGAGCAGATAACAGAAAAACTTGGACTTCTCACCTCAACGGAGAAAACCTGACATAAT 404
                       ************************************************************

consensus_11009#0      TTTGTTTTTCTTTTTGTAGATGAAAAACTATTAATTCAGGAACGCTGACATTGGTGCCTT 1560
consensus_11009#1      CTTGCTTTTCTTCCCGCG--TCCATCACCACCA--CCACCACCACCTCCTCCTCCTCCTC 460
                        *** *******   *    *  *  ** *  *   **  * * *   *       *** 

consensus_11009#0      CCTCAGTGAGATATGTTGACTAACATCTATTTCGCAGTGTACCGTATTTTTTCCATCATG 1620
consensus_11009#1      CTACGGCGGCGGGATCAGTCTCAGCGCCGGTGATCGGAGGGC--TAGGGTTGCCGTCAGG 518
                       *  * * *         * ** *   *   *   * * *  *  **   ** ** *** *

consensus_11009#0      TACCGTAATGTATCATAGTGCCATACATTCATCTTTGGTCCATTGACACTTTCTGATATC 1680
consensus_11009#1      GTCGGGGCCCCCCCG----GCGAAGGCGGCTTGCTCGCTTGGTTGGGGGTTTGGGGGGT- 573
                         * *        *     ** *      * *  * * *   ***    ***  *   * 

consensus_11009#0      ATTGTGCGTGATTTCTAAAATATTCTCAAGTTTGGTTAAATGTTACAAAAA 1731
consensus_11009#1      -TTG----------------------------------------------- 576
                        ***                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)