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Oryza sativa
cluster # 11053 cluster # 11053       Sequences # 8       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_11053#0 length = 1733 sequences # 6  
consensus_11053#1 length = 719 sequences # 1  
consensus_11053#2 length = 464 sequences # 1  

consensusID : consensus_11053#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1733
fasta sequence
                              [CTCCTCCCCAGTGGTCTCCTCCCGGAAACTACCACCAGCAGCAGGCCCCTCCCCCTGCGCGCCACTACTACGGCCCCCCGCAGCATCAGCCTCGCTACAACTACGGCCCTCCGCAGCCACAGGCGCCGCCGCCGCCGCGCAACGACTACGGGCCACCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCGGGAGGCTGTGGTGGGGCCAGGGGAGCTGATCGGGCTCGGACGGGAGGGGCGAGTCAAGGAGGCGGTGGAGAAGCTCGACAAGGGGGCGCGCGCCGACCCGCAGGCCTTCTACGAGCTCGCCGCGGCTTGCTCCAACCCCAAGCTGCTCGAGGAGCTCAGGAAGATCCACGACTTCTTCCTCCGCTCGCCCTTCCGCGCCGACCTCCAGGTCAACAACAAGATGCTCGAGATGTACGCCAAGTGCGCCGCCATGAACCACGCCCGCAGGACGTTCGACCATATGCCTGACCGGAACATGGACTCCTGGCACATCATGATCGATGGCTACGCGGTGAACGGGCTCGGGGACGTTGCGCTGCAGCTGTTCGAGGAGATGAAGACCAAGTATGGAATTGCACCGACCGCCCACACTTTCACGCTCGTGCTCAATGCCTGTGCCAACTCGGAGGCCATTGAGGAGGCATTCCTGTACTTTGATGCCATGTCCAGGGATCATGGCATTGAGCCTGGTGTGGAGCACTATGTTGGGATCATTGAGGTTTTGGGGAAGTCGGGGCATCTCAACGAGGCTGTGGAGTACATCGAGAAGCTTCCGTTTGAGCCCACTGACACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGCCTATTTTTTTTCAGAGCTCTTGATGAGGTATCTTACTAACATGTTAGTCCTATTCTGGGGAAATGTTTACATTGCATTGATGATAAGAGAGGTTTCCTGCAATTTCATAAAGAGTATGTGTTGTTGGATATTGGTGTATTATGCTGTACGCTAATTTAAATCTTTGAAGATATCTCTTAAAAAAAAAAAAAAAA]

[+] EMBL CB656200             [CTCCTCCCCAGTGGTCTCCTCCCGGAAACTACCACCAGCAGCAGGCCCCTCCCCCTGCGCGCCACTACTACGGCCCCCCGCAGCATCAGCCTCGCTACAACTACGGCCCTCCGCAGCCACAGGCGCCGCCGCCGCCGCGCAACGACTACGGGCCACCGCCGCCGCCGCCGCAGCAGCAGCAGCAGCAGCGGGAGGCTGTGGTGGGGCCAGGGGAGCTGATCGGGCTCGGACGGGAGGGGCGAGTCAAGGAGGCGGTGGAGAAGCTCGACAAGGGGGCGCGCGCCGACCCGCAGGCCTTCTACGAGCTCGCCGCGGCTTGCTCCAACCCCAAGCTGCTCGAGGAGCTCAGGAAGATCCACGACTTCTTCCTCCGCTCGCCCTTCCGCGCCGACCTCCAGGTCAACAACAAGATGCTCGAGATGTACGCCAAGTGCGCCGCCATGAACCACGCCCGCAGGACGTTCGACCATATGCCTGACCGGAACATGGACTCCTGGCACATCATGATCGATGGCTACGCGGTGAACGGGCTCGGGGACGTTGCGCTGCAGCTGTTCGAGGAGATGAAGACCAAGTATGGAATTGCACCGACCGCCCACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB654547             [                                                                                                                                                                                                                                                            CGGTGGACATTCTCGACAAGGGGGCGCGCGCCGACCCGCAGGCCTTCTACGAGCTCGCCGCGGCTTGCTCCAACCCCAAGCTGCTCGAGGAGCTCAGGAAGATCCACGACTTCTTCCTCCGCTCGCCCTTCCGCGCCGACCTCCAGGTCAACAACAAGATGCTCGAGATGTACGCCAAGTGCGCCGCCATGAACCACGCCCGCAGGACGTTCGACCATATGCCTGACCGGAACATGGACTCCTGGCACATCATGATCGATGGCTACGCGGTGAACGGGCTCGGGGACGTTGCGCTGCAGCTGTTCGAGGAGATGAAGACCAAGTATGGAATTGCACCGACCGCCCACACTTTCACGCTCGTGCTCAATGCCTGTGCCAACTCGGAGGCCATTGAGGAGGCATTCCTGTACTTTGATGCCATGTCCAGGGATCATGGCATTGAGCCTGGTGTGGAGCACTATGTTGGGATCATTGAGGTTTTGGGGAAGTCGGGGCATCTCAACGAGGCTGTGGAGTACATCGAGAAGCTTCCGTTTGAGCCCACTGACACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAACGAACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB674077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CATCGAGAAGCTTCCGTTTGAGCCCACTGACACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGCC                                                                                                                                                                                                 ]
[+] EMBL CB685215             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AAGGTGGTGAACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGC                                                                                                                                                                                                  ]
[-] EMBL CA762569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCGCTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCACATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGCCTATTTTTTTTCAGAGCTCTTGATGAGGTATCTTACTAACATGTTAGTCCTATTCTGGGGAAATGTTTACATTGCATTGATGATAAGAGAGGTTTCCTGCAATTTCATAAAGAGTATGTGTTGTTGGATATTGGTGTATTATGCTGTACGCTAATTTAAATCTTTGAAGATATCTCTTAAAAAAAAAAAAAAAA]
[+] EMBL CA767478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GCAGGCACTGCTGTACCCTAGTGAGAGGCTNGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCGCTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTACCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCACATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTAaa                                                                                                                                                                                                           ]


>consensus_11053#0 CTCCTCCCCAGTGGTCTCCTCCCGGAAACTACCACCAGCAGCAGGCCCCTCCCCCTGCGC GCCACTACTACGGCCCCCCGCAGCATCAGCCTCGCTACAACTACGGCCCTCCGCAGCCAC AGGCGCCGCCGCCGCCGCGCAACGACTACGGGCCACCGCCGCCGCCGCCGCAGCAGCAGC AGCAGCAGCGGGAGGCTGTGGTGGGGCCAGGGGAGCTGATCGGGCTCGGACGGGAGGGGC GAGTCAAGGAGGCGGTGGAGAAGCTCGACAAGGGGGCGCGCGCCGACCCGCAGGCCTTCT ACGAGCTCGCCGCGGCTTGCTCCAACCCCAAGCTGCTCGAGGAGCTCAGGAAGATCCACG ACTTCTTCCTCCGCTCGCCCTTCCGCGCCGACCTCCAGGTCAACAACAAGATGCTCGAGA TGTACGCCAAGTGCGCCGCCATGAACCACGCCCGCAGGACGTTCGACCATATGCCTGACC GGAACATGGACTCCTGGCACATCATGATCGATGGCTACGCGGTGAACGGGCTCGGGGACG TTGCGCTGCAGCTGTTCGAGGAGATGAAGACCAAGTATGGAATTGCACCGACCGCCCACA CTTTCACGCTCGTGCTCAATGCCTGTGCCAACTCGGAGGCCATTGAGGAGGCATTCCTGT ACTTTGATGCCATGTCCAGGGATCATGGCATTGAGCCTGGTGTGGAGCACTATGTTGGGA TCATTGAGGTTTTGGGGAAGTCGGGGCATCTCAACGAGGCTGTGGAGTACATCGAGAAGC TTCCGTTTGAGCCCACTGACACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATG GAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAG TTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTG ATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGA ACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAA AGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCA CCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACA ATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGC GCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTT TGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTT CTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCG CATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTAT GATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGCCTATTTTTTTTCAGAGCTCTT GATGAGGTATCTTACTAACATGTTAGTCCTATTCTGGGGAAATGTTTACATTGCATTGAT GATAAGAGAGGTTTCCTGCAATTTCATAAAGAGTATGTGTTGTTGGATATTGGTGTATTA TGCTGTACGCTAATTTAAATCTTTGAAGATATCTCTTAAAAAAAAAAAAAAAA



consensusID : consensus_11053#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 719
fasta sequence
                              [GACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATAAGGGGCTTTTATTCTTGATGGCCTAAAAAAAAAAAAAAAAAAGA]

[-] EMBL CB656201             [GACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAACGAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACCCCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGATCATGAAGATGAATAAGGGGCTTTTATTCTTGATGGCCTAAAAAAAAAAAAAAAAAAGA]


>consensus_11053#1 GACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTT AATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGAT GGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGATCGAAAAGAAGGTGGTGAAC GAACAGCGGTATGTCCCAGACACAAGGTATGTTCTCCATGACATTGATCAGGAGGCAAAG GAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTATGGTTTGATTAGCACC CCAGCAAGGACTCCACTTCGCATCATTAAGAACCTCAGGATCTGTGGAGACTGCCACAAT GCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTATCGTAAGAGATAATAAGCGC TTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTATTGGTGAACATGGCTTTTG TTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTATTGAGCACTTCTTTTTTCT TATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGGCAGCCATGCTTTTAGCGCA TAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCTGTTATCCATCTCATTATGA TCATGAAGATGAATAAGGGGCTTTTATTCTTGATGGCCTAAAAAAAAAAAAAAAAAAGA



consensusID : consensus_11053#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 464
fasta sequence
                              [GCTTCCGTTTGAGCCCACTGCCACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAAGTAAGCTTTTCAGATACGGCTTCACTGCACGACGCAGCCAATCAATTGTTAGCCTGAGATACGGCTCAATCCAATGATCGACTTGACCTTTGCAATTTTGAAAAACGACTTCAATCAGCTTGGGAGCAGGTATAATGTCAGAATCTTCCATGTTTTGGTCTGTCATAATAGATGACAGTGCTCTCCATAGGCTTTGCTGATAATCAGGATCTTTGCATGCAATAAATTGATCAGTGCCACGGGAAATGTAGTTG]

[-] EMBL CA923294             [GCTTCCGTTTGAGCCCACTGCCACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTGATGGGAGGAACAAGCTGGTAGAGTACAAGTAAGCTTTTCAGATACGGCTTCACTGCACGACGCAGCCAATCAATTGTTAGCCTGAGATACGGCTCAATCCAATGATCGACTTGACCTTTGCAATTTTGAAAAACGACTTCAATCAGCTTGGGAGCAGGTATAATGTCAGAATCTTCCATGTTTTGGTCTGTCATAATAGATGACAGTGCTCTCCATAGGCTTTGCTGATAATCAGGATCTTTGCATGCAATAAATTGATCAGTGCCACGGGAAATGTAGTTG]


>consensus_11053#2 GCTTCCGTTTGAGCCCACTGCCACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAA TGGAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAA AGTTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCT TGATGGGAGGAACAAGCTGGTAGAGTACAAGTAAGCTTTTCAGATACGGCTTCACTGCAC GACGCAGCCAATCAATTGTTAGCCTGAGATACGGCTCAATCCAATGATCGACTTGACCTT TGCAATTTTGAAAAACGACTTCAATCAGCTTGGGAGCAGGTATAATGTCAGAATCTTCCA TGTTTTGGTCTGTCATAATAGATGACAGTGCTCTCCATAGGCTTTGCTGATAATCAGGAT CTTTGCATGCAATAAATTGATCAGTGCCACGGGAAATGTAGTTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_11053#0      CTCCTCCCCAGTGGTCTCCTCCCGGAAACTACCACCAGCAGCAGGCCCCTCCCCCTGCGC 60
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      GCCACTACTACGGCCCCCCGCAGCATCAGCCTCGCTACAACTACGGCCCTCCGCAGCCAC 120
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      AGGCGCCGCCGCCGCCGCGCAACGACTACGGGCCACCGCCGCCGCCGCCGCAGCAGCAGC 180
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      AGCAGCAGCGGGAGGCTGTGGTGGGGCCAGGGGAGCTGATCGGGCTCGGACGGGAGGGGC 240
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      GAGTCAAGGAGGCGGTGGAGAAGCTCGACAAGGGGGCGCGCGCCGACCCGCAGGCCTTCT 300
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      ACGAGCTCGCCGCGGCTTGCTCCAACCCCAAGCTGCTCGAGGAGCTCAGGAAGATCCACG 360
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      ACTTCTTCCTCCGCTCGCCCTTCCGCGCCGACCTCCAGGTCAACAACAAGATGCTCGAGA 420
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TGTACGCCAAGTGCGCCGCCATGAACCACGCCCGCAGGACGTTCGACCATATGCCTGACC 480
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      GGAACATGGACTCCTGGCACATCATGATCGATGGCTACGCGGTGAACGGGCTCGGGGACG 540
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TTGCGCTGCAGCTGTTCGAGGAGATGAAGACCAAGTATGGAATTGCACCGACCGCCCACA 600
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      CTTTCACGCTCGTGCTCAATGCCTGTGCCAACTCGGAGGCCATTGAGGAGGCATTCCTGT 660
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      ACTTTGATGCCATGTCCAGGGATCATGGCATTGAGCCTGGTGTGGAGCACTATGTTGGGA 720
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TCATTGAGGTTTTGGGGAAGTCGGGGCATCTCAACGAGGCTGTGGAGTACATCGAGAAGC 780
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ----------------------------------------------------------GC 2
                                                                                   

consensus_11053#0      TTCCGTTTGAGCCCACTGACACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATG 840
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      TTCCGTTTGAGCCCACTGCCACGGTGTGGGAATCGCTCTTGAACCTTGCGCGCATGAATG 62
                                                                                   

consensus_11053#0      GAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAG 900
consensus_11053#1      --GACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAG 58
consensus_11053#2      GAGACATTGACCTTGAGGATAGGGCAGAGGAGTTGCTGGTCTCGCTCGATCCAACCAAAG 122
                         **********************************************************

consensus_11053#0      TTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTG 960
consensus_11053#1      TTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTG 118
consensus_11053#2      TTAATCCTAAGAAGCTCCCTACTCCACCTCCGAAGAGGCGCCTTGGGATTAATATGCTTG 182
                       ************************************************************

consensus_11053#0      ATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGAT-CGA----AAAGAAGGT 1015
consensus_11053#1      ATGGGAGGAACAAGCTGGTAGAGTACAGGTTGCCGCCCAAGAT-CGA----AAAGAAGGT 173
consensus_11053#2      ATGGGAGGAACAAGCTGGTAGAGTACAAGTAAGCTTTTCAGATACGGCTTCACTGCACGA 242
                       *************************** **   *     **** **     *  * * * 

consensus_11053#0      GGTGAACGAACAGCGGTATGTCCCAGACACAAGGTA------TGTTCTCCATGACATT-- 1067
consensus_11053#1      GGTGAACGAACAGCGGTATGTCCCAGACACAAGGTA------TGTTCTCCATGACATT-- 225
consensus_11053#2      CGCAGCCAATCAATTGTTAGCCTGAGATACGGCTCAATCCAATGATCGACTTGACCTTTG 302
                        *    * * **   **  * *  *** **     *      ** **  * **** **  

consensus_11053#0      -GATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTA 1126
consensus_11053#1      -GATCAGGAGGCAAAGGAGCAGGCACTGCTGTACCATAGTGAGAGGCTAGCGATTGCCTA 284
consensus_11053#2      CAATTTTGAAAAACGACTTCAATCAGCTTGGGAGCA-GGTATAATGTCAG-AATCTTCCA 360
                         **   **   *      **  **     * * **  **   * *  **  **   * *

consensus_11053#0      TGGTTTGATTAG-CACCCCAGCAAGGACTCCACTTCGCATCATTAA--GAACCTCAGGAT 1183
consensus_11053#1      TGGTTTGATTAG-CACCCCAGCAAGGACTCCACTTCGCATCATTAA--GAACCTCAGGAT 341
consensus_11053#2      TGTTTTGGTCTGTCATAATAGATGACAGTGCTCTCCATAGGCTTTGCTGATAATCAGGAT 420
                       ** **** *  * **    **     * * * ** *  *   **    **   *******

consensus_11053#0      CTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTAT 1243
consensus_11053#1      CTGTGGAGACTGCCACAATGCTATCAAGATCATGTCGAGGATTGTAGGGAGAGAGCTTAT 401
consensus_11053#2      CTTTGCA---TGCAATAAATTGATCAGTGCCACGGGAAATGTAGTTG------------- 464
                       ** ** *   *** * **    ****    ** *   *   * ** *             

consensus_11053#0      CGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTA 1303
consensus_11053#1      CGTAAGAGATAATAAGCGCTTCCACCATTTCAAGGATGGGAAGTGCTCTTGTGGTGATTA 461
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTA 1363
consensus_11053#1      TTGGTGAACATGGCTTTTGTTCAGCTGAATACAATGGTCTGAAATTGCCAATACGATGTA 521
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGG 1423
consensus_11053#1      TTGAGCACTTCTTTTTTCTTATTATTAGGATTGCAGCCATCCTATATGAATATATGCTGG 581
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      CAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCT 1483
consensus_11053#1      CAGCCATGCTTTTAGCGCATAAACAATATCCAGTTATCTGATGGTAGTGTTAGTACTCCT 641
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      GTTATCCATCTCATTATGATCATGAAGATGAATGTGATGCTTTTATTCTTGATGGCCTAT 1543
consensus_11053#1      GTTATCCATCTCATTATGATCATGAAGATGAATAAGGGGCTTTTATTCTTGATGGCCTAA 701
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TTTTTTTCAGAGCTCTTGATGAGGTATCTTACTAACATGTTAGTCCTATTCTGGGGAAAT 1603
consensus_11053#1      ------AAAAAAAAAAAAAAAAGA------------------------------------ 719
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      GTTTACATTGCATTGATGATAAGAGAGGTTTCCTGCAATTTCATAAAGAGTATGTGTTGT 1663
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      TGGATATTGGTGTATTATGCTGTACGCTAATTTAAATCTTTGAAGATATCTCTTAAAAAA 1723
consensus_11053#1      ------------------------------------------------------------
consensus_11053#2      ------------------------------------------------------------
                                                                                   

consensus_11053#0      AAAAAAAAAA 1733
consensus_11053#1      ----------
consensus_11053#2      ----------
                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)