|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_11054#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 2169 fasta sequence
[AGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGGTGCGTTACGTGCTCCCTCCCCTCCTCGCTCCCTGTCAATTTGATGTGTCGCTGCCGCTGCGCGCTTCTGTTCCTCCGTTGGGATTCGCTCGGCAACTGTTTGTTGAATGCCCTGACGGGGGTTCTCGTGAGTGTATTGGCAACCTGGGATCGTCAGCTGTTCTGTTCATCCATGTATGTATGATGGGGCTCCTTAAAAATTGGAGCGCCTCCTTGCTAGTAGTAAGATTTATTTAGCTGAGATTTTTGGTGGAAAGTGTTGGATGTACGTCGGGTTGCAAAAGAAAGGGGGTCTGGAGAATAATTTAGGAATATAATACTTGGTTAAATCATTTCAAATATGGTATGCAGTCCGCTTTGCTTTGCTATAGTAACCGTAACCAATAGCTGTGTTGCACTGTGTGCTCTGTGCTGCTTTACTTTGAAATACATCTTCTCCTGCTATAGCAACATTGATAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTGATAAGGTGCTTCATTTAGTATACGAGATATGGTATTTAGGCTTTTTGGATGCCGGGTTTTACTTTTCAGTTTTCAGCATAAATTGTACACGTTTAGTTCTTGTATTTTATTCGAGCTACGCTATAGATTTTTGATATTTTGTGATTCCTGCCATTGCAAAGCCAACTCCTAAGATGTTCTGTCAGATTATCCATATTTCTCACTTGTTATGCTCATTCAATTGCCAAGGGAGTTGGCTGTCCAATCTCTTGGTTGATTTTTTTAGACAACGTGAGGCTTGTATTGTAGTTGACATTGGATAATGATCATCACATTAAGCCTTTCTGGCCATTGGGCTTAGCATTAGTCTCCTAATTTACCAGTGTTACAACTCAATGCTTATACCATGATTCTTAATGGAATGATAAACACTGATATATTGTATAGCAGTAATATACTAGTGTACACCCCTGCCCAACCTAAGTTATATCGGGTCAACTGGATGATGGTTTGTTGTTCTGCAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGTAAGTATCCCCAGAATTGTAGGATGCCATTTCCTTCATGATCATTTATGCTATTCTATTATTCATCATGTTTTAGTGTTTTACACTCAGATATAACCCCACTACCTGGCATGTATTGTTAGTCGCACAATATTTAAAAACAAGTCCATATGTTCTACTGCCAAAGGCTGCAATTCAGTGCGTATAAAAAAAAGACGTGGAGAAAAATCTTAGTATGCATAGCATAGATGATAAAGAAATGGTAAGGACAGAACATTAGATGTTCTAGTGGAGGATGCATTTAAAGAACTGACTGAAAAGCTAAGCTGATTGAATTACAGGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCG]
[+] EMBL AK068754 [AGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGGTGCGTTACGTGCTCCCTCCCCTCCTCGCTCCCTGTCAATTTGATGTGTCGCTGCCGCTGCGCGCTTCTGTTCCTCCGTTGGGATTCGCTCGGCAACTGTTTGTTGAATGCCCTGACGGGGGTTCTCGTGAGTGTATTGGCAACCTGGGATCGTCAGCTGTTCTGTTCATCCATGTATGTATGATGGGGCTCCTTAAAAATTGGAGCGCCTCCTTGCTAGTAGTAAGATTTATTTAGCTGAGATTTTTGGTGGAAAGTGTTGGATGTACGTCGGGTTGCAAAAGAAAGGGGGTCTGGAGAATAATTTAGGAATATAATACTTGGTTAAATCATTTCAAATATGGTATGCAGTCCGCTTTGCTTTGCTATAGTAACCGTAACCAATAGCTGTGTTGCACTGTGTGCTCTGTGCTGCTTTACTTTGAAATACATCTTCTCCTGCTATAGCAACATTGATAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTGATAAGGTGCTTCATTTAGTATACGAGATATGGTATTTAGGCTTTTTGGATGCCGGGTTTTACTTTTCAGTTTTCAGCATAAATTGTACACGTTTAGTTCTTGTATTTTATTCGAGCTACGCTATAGATTTTTGATATTTTGTGATTCCTGCCATTGCAAAGCCAACTCCTAAGATGTTCTGTCAGATTATCCATATTTCTCACTTGTTATGCTCATTCAATTGCCAAGGGAGTTGGCTGTCCAATCTCTTGGTTGATTTTTTTAGACAACGTGAGGCTTGTATTGTAGTTGACATTGGATAATGATCATCACATTAAGCCTTTCTGGCCATTGGGCTTAGCATTAGTCTCCTAATTTACCAGTGTTACAACTCAATGCTTATACCATGATTCTTAATGGAATGATAAACACTGATATATTGTATAGCAGTAATATACTAGTGTACACCCCTGCCCAACCTAAGTTATATCGGGTCAACTGGATGATGGTTTGTTGTTCTGCAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGTAAGTATCCCCAGAATTGTAGGATGCCATTTCCTTCATGATCATTTATGCTATTCTATTATTCATCATGTTTTAGTGTTTTACACTCAGATATAACCCCACTACCTGGCATGTATTGTTAGTCGCACAATATTTAAAAACAAGTCCATATGTTCTACTGCCAAAGGCTGCAATTCAGTGCGTATAAAAAAAAGACGTGGAGAAAAATCTTAGTATGCATAGCATAGATGATAAAGAAATGGTAAGGACAGAACATTAGATGTTCTAGTGGAGGATGCATTTAAAGAACTGACTGAAAAGCTAAGCTGATTGAATTACAGGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCG]
consensusID : consensus_11054#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1432 fasta sequence
[CTGACGTCACACTAGCAGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGG--AGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAATCGTGTATTCGTT-AATCTGGAAATGATTTGTGTACACTGGATAGGATAGGATCCAGCTCTGATATGCTTTCAGTATGAGCGATGAGCGAAGCCGCAACAGCCATGGAGCATAAATCAAATC]
[+] EMBL CB685642 [CTGACGTCACACTAGCAGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGA ]
[+] EMBL AK067781 [ CAGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACAAGAGAATAGCAGAAGTCAAAGAGAAGGAAAGGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGG AGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAATCGTGTATTCGTT AATCTGGAAATGATTTGTGTACACTGGATAGGATAGGATCCAGCTCTGATATGCTTTCAGTATGAGCGATGAGCGAAGCCGCAACAGCCATGGAGCATAAATCAAATC]
[-] EMBL CB685643 [ GAAGTCAAAGAGAAGGAAAGGCAGAACACC TGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGG AGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAATCGTGTATTCGTT AATCTGGAAATGATTTGTG ]
[+] EMBL CF311973 [ CTACTGTTGGATTATTTATAAGTTCATGGAGAATGACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACACCTGATGGGGNAAGGAGATCGATTTGGATGATGAAGAATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTAC ]
[+] EMBL CA753101 [ AAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATCCTAAGCAACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCAAATTACCCCTGATGG ]
[-] EMBL CF311974 [ GGTGCAAATTACACCTGATGGGG AGGAGATCGATTTGGATGATGAAGAATCAAATCCCAACAAGTTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCAAAGGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCAAACACAGGCGTTGTTTGGACGGCCAAATATTAAAGTTTTAGATGATGGCTCTGTCAATGCAAAGGATGGTCAAATGATAACAATAACTTTCATAGAACTCACCCCTCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAAAGTCATGTAGAATCCAAATACCATTTTGTTAACAGTTAATCGTGTATTCGTTGTATCTGGAAATGATTTGTGTACACTGGATAGGATA ]
consensusID : consensus_11054#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence
[CCGCGGACGCGTGGGTGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCCAATCCTAAGCCACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCACAATTACACCTGATGGGGAGGAGATCGATTTGGATGATGAAGAATCAAATCCCAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCANAAGGTATGCTACTATCAGATCCAAAGAGGCCGTCTCACTGATAGAGAAGCACAACACCACGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCCAAGGATGGTCACAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAATACCATTTTGTTAACAGTTAATTGTGTATTCGTTAATCTGGAAAAAAAAAA]
[+] EMBL BQ907718 [CCGCGGACGCGTGGGTGGCTACTTCCTAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCCAATCCTAAGCCACAGATAGTACTTGAAAACCTGAAGCCTAATCCATTCTGGGATATGGAATCATTGGTGCACAATTACACCTGATGGGGAGGAGATCGATTTGGATGATGAAGAATCAAATCCCAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGCTGATACGTTGCANAAGGTATGCTACTATCAGATCCAAAGAGGCCGTCTCACTGATAGAGAAGCACAACACCACGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCCAAGGATGGTCACAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCAGCTGCTTTTGGATCCTTTTTGTGGGAAGCTGAGAGTCATGTAGAATCCAATACCATTTTGTTAACAGTTAATTGTGTATTCGTTAATCTGGAAAAAAAAAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 AGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCCGCCTCCTCCTCCTCT 60
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGCTCCGCGCCTCCTCCT 120
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCTGCTGCCTCGCCAGGC 180
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGGTGCGTTACGTGCTCCCTCCCC 240
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 TCCTCGCTCCCTGTCAATTTGATGTGTCGCTGCCGCTGCGCGCTTCTGTTCCTCCGTTGG 300
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GATTCGCTCGGCAACTGTTTGTTGAATGCCCTGACGGGGGTTCTCGTGAGTGTATTGGCA 360
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 ACCTGGGATCGTCAGCTGTTCTGTTCATCCATGTATGTATGATGGGGCTCCTTAAAAATT 420
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GGAGCGCCTCCTTGCTAGTAGTAAGATTTATTTAGCTGAGATTTTTGGTGGAAAGTGTTG 480
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GATGTACGTCGGGTTGCAAAAGAAAGGGGGTCTGGAGAATAATTTAGGAATATAATACTT 540
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GGTTAAATCATTTCAAATATGGTATGCAGTCCGCTTTGCTTTGCTATAGTAACCGTAACC 600
consensus_11054#1 ------------------------------------------------------------
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 AATAGCTGTGTTGCACTGTGTGCTCTGTGCTGCTTTACTTTGAAATACATCTTCTCCTGC 660
consensus_11054#1 -----------------------------------------------------------C 1
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 TATAGCAACATTGATAAGGTGCTTCCTTTAGTATACGAGATATGGTATTTAGGCTTTTTG 720
consensus_11054#1 TGACGTCACACTAGCAGCGAAGCCCAAGCAGCCGACGGAATCCCGAATCCCCACCCACCC 61
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 ATAAGGTGCTTCATTTAGTATACGAGATATGGTATTTAGGCTTTTTGGATGCCGGGTTTT 780
consensus_11054#1 GCCTCCTCCTCCTCTCGTCCGCCCCTCCTCCGATGGCGGCGTGGGCTGACGCCGCGCTGC 121
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 ACTTTTCAGTTTTCAGCATAAATTGTACACGTTTAGTTCTTGTATTTTATTCGAGCTACG 840
consensus_11054#1 TCCGCGCCTCCTCCTCCCCCGCCTCCGCCACCGCCGCCGCGTCCTCCTCCTCCTCGTCCT 181
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CTATAGATTTTTGATATTTTGTGATTCCTGCCATTGCAAAGCCAACTCCTAAGATGTTCT 900
consensus_11054#1 GCTGCCTCGCCAGGCCGCGCGCATCCCTGGAGTCCAGGCTACACCGCCGCAAGAGCTTTC 241
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GTCAGATTATCCATATTTCTCACTTGTTATGCTCATTCAATTGCCAAGGGAGTTGGCTGT 960
consensus_11054#1 TTTATACCAGTAGCCCCAAATCTGGTTTCCTAATTAATAGTTGTCGAGCAAGGAGCTTGA 301
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CCAATCTCTTGGTTGATTTTTTTAGACAACGTGAGGCTTGTATTGTAGTTGACATTGGAT 1020
consensus_11054#1 AGGTTAAAGCAAAAATGGATTCTGGTGATGGCCTTACAAGACTTGCTCCACTTATGTTTG 361
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 AATGATCATCACATTAAGCCTTTCTGGCCATTGGGCTTAGCATTAGTCTCCTAATTTACC 1080
consensus_11054#1 AAACTCCAAGCGGTCAACTTCTGGTCCAGATACTCCAATCACACCCTCACCTACTTCCTG 421
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 AGTGTTACAACTCAATGCTTATACCATGATTCTTAATGGAATGATAAACACTGATATATT 1140
consensus_11054#1 CAACAGTTGACCAGCAACTTGAAAACCTTCAATCAGAGAAAGATGCTCAAGAGAAAGAAG 481
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GTATAGCAGTAATATACTAGTGTACACCCCTGCCCAACCTAAGTTATATCGGGTCAACTG 1200
consensus_11054#1 CCTCGAAAGTTCCCCAGGACCTCCTTTACAAGAGAATAGCAGAAGTCAAAGAGAAGGAAA 541
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GATGATGGTTTGTTGTTCTGCAGAGCTTTCTTTATACCAGTAGCCCCAAATCTGGTTTCC 1260
consensus_11054#1 GGCAGAACACCTTGGAAGAGATCATCTACTGTTGGATTATTTATAAGTTCATGGAGAATG 601
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 TAATTAATAGTTGTCGAGCAAGGAGCTTGAAGGTTAAAGCAAAAATGGATTCTGGTGATG 1320
consensus_11054#1 ACATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTACGTGACATCTCCTCAT 661
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 GCCTTACAAGACTTGCTCCACTTATGTTTGAAACTCCAAGCGGTCAACTTCTGGTCCAGA 1380
consensus_11054#1 TGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTGAGATGATAC 721
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 TACTCCAATCACACCCTCACCTACTTCCTGCAACAGTTGACCAGCAACTTGAAAACCTTC 1440
consensus_11054#1 AAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATACAGTTGTTG 781
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 AATCAGAGAAAGATGCTCAAGAGAAAGAAGCCTCGAAAGTTCCCCAGGACCTCCTTTACA 1500
consensus_11054#1 AAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATGGCTACTTCC 841
consensus_11054#2 ---------------------------------CCGCGGACG-CGTGGGTGGCTACTTCC 26
consensus_11054#0 AGTAAGTATCCCCAGAATTGTAGGATGCCATTTCCTTCATGATCATTTATGCTATTCTAT 1560
* * * ** *
consensus_11054#1 TAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCAAATC 901
consensus_11054#2 TAAAGAGGGTAGATGAGCGATTCCAACTCGAGAAGAACATGAAGACTCTCCCGCCCAATC 86
consensus_11054#0 TATTCATCATGTTTTAGTGTTTTACACTCAGATATAACCCCACTAC-CTGGCATGTATTG 1619
** * * * ** * ** **** * *** * ** ** * * *
consensus_11054#1 CTAAGCAACAGATAGTACTTGAAAACCTGAA-GCCTAATCCATT-CTGGGATATGGAATC 959
consensus_11054#2 CTAAGCCACAGATAGTACTTGAAAACCTGAA-GCCTAATCCATT-CTGGGATATGGAATC 144
consensus_11054#0 TTA-GTCGCA--CAATATTTAAAAACAAGTCCATATGTTCTACTGCCAAAGGCTGCAAT- 1675
** * ** * ** ** ***** * * ** * * * ** ***
consensus_11054#1 ATTGGTGCA-AATTACACCTGATGGGGAGGAGA---TCGATTTGGATGATGAAGA----- 1010
consensus_11054#2 ATTGGTGCACAATTACACCTGATGGGGAGGAGA---TCGATTTGGATGATGAAGA----- 196
consensus_11054#0 -TCAGTGCGTATAAAAAAAAGACGTGGAGAAAAATCTTAGTATGCATAGCATAGATGATA 1734
* **** * * * ** * **** * * * * ** ** ***
consensus_11054#1 ATCAAATCCAAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGC---TGATACGTTGC- 1066
consensus_11054#2 ATCAAATCCCAACAAGCTGAGGTCCTATGTTTCACGCTTGGATGC---TGATACGTTGC- 252
consensus_11054#0 AAGAAATGGTAAGGACAGAACATTAGATGTTCTAGTGGAGGATGCATTTAAAGAACTGAC 1794
* **** ** * * * ***** * ****** * * **
consensus_11054#1 --AAA-GGTATGCTACTATCAGATCAAAAGAGGCCGTCTCACTGATAGAGAAGCA-AACA 1122
consensus_11054#2 --ANAAGGTATGCTACTATCAGATCCAAAGAGGCCGTCTCACTGATAGAGAAGCACAACA 310
consensus_11054#0 TGAAAAGCTAAGCTGAT-TGAATTACAGGAGAATAGCAGAAGTCAAAGAGAAGGA-AAGG 1852
* * * ** *** * * * * * * * * * ******* * **
consensus_11054#1 CA--GGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCAA 1180
consensus_11054#2 CCACGGCGTTGTTTGGACGGCCAGATATTAAAGTCTTAGATGATGGCTCTGTCAATGCCA 370
consensus_11054#0 C---AGAACACCTTGGAAG---AGATCATCTACTGTTGGATTATTTATAAGTTCATG--G 1904
* * ***** * **** * * * ** *** ** * ** ***
consensus_11054#1 AGGATGGTCA-AATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCA 1239
consensus_11054#2 AGGATGGTCACAATGATAACAATAACTTTCATAGAACTCACCCATCTTGTTTTGGAGGCA 430
consensus_11054#0 AGAATGA-CATATCAATGACACCTGCATTAGCACCATTAGGTGGCCCTGTAC--GTGACA 1961
** *** ** * ** *** * ** * * * * *** * * **
consensus_11054#1 GCTGCTTTTGGATCCTTTTTGTGGG-AAGCTGAGAGTCATGTAGAATCCAAATACCATTT 1298
consensus_11054#2 GCTGCTTTTGGATCCTTTTTGTGGG-AAGCTGAGAGTCATGTAGAATCCAA-TACCATTT 488
consensus_11054#0 TCTCCTCATTGCCTAACCAAGAGGATAGGTTGCAAAGCATACATTCCCCGGACGCTCTTG 2021
** ** * * * ** * * ** * *** * ** * **
consensus_11054#1 TGTTAACAGTTAATCGTGTATTCGTTAATCTGGAAATGATTTGTGTACACTGGATAGGAT 1358
consensus_11054#2 TGTTAACAGTTAATTGTGTATTCGTTAATCTGGAAAAAAAAAA----------------- 531
consensus_11054#0 AGATGATACAAAATCATCTCAACCTTATAATGGGTGAAAAGGTAGCAGCCCCACTAGATA 2081
* * * * *** * * * *** *** *
consensus_11054#1 AGGATCCAGCTCTGATATGCTTTCAGTATGAGCGATGAGCGAAGCCGCAACAGCCATGGA 1418
consensus_11054#2 ------------------------------------------------------------
consensus_11054#0 CAGTTGTTGAAATCAGCAACTTAAATCTGGGAAAGCTTTATGCAGCATCCATCATGTATG 2141
consensus_11054#1 GCATAAATCAAATC-------------- 1432
consensus_11054#2 ----------------------------
consensus_11054#0 GCTACTTCCTAAAGAGGGTAGATGAGCG 2169
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||